RNA–Protein interactions for RNA: ENST00000569278.1

CHRFAM7A-206, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 3

Gene CHRFAM7A, Length 464 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-206ENST00000569278 KRTAP19-1Q8IUB9 90 aa7.7□□□□□ -1.18
CHRFAM7A-206ENST00000569278 LINC00612Q8N6U2 182 aa7.7□□□□□ -1.18
CHRFAM7A-206ENST00000569278 TOMM6Q96B49 74 aa7.7□□□□□ -1.18
CHRFAM7A-206ENST00000569278 MRPS16Q9Y3D3 137 aaKnown RBP7.7□□□□□ -1.18
CHRFAM7A-206ENST00000569278 LINC00587B1AMM8 73 aa7.69□□□□□ -1.18
CHRFAM7A-206ENST00000569278 IGLC3P0DOY3 106 aa7.69□□□□□ -1.18
CHRFAM7A-206ENST00000569278 FUSP35637 526 aaKnown RBP eCLIP7.69□□□□□ -1.18
CHRFAM7A-206ENST00000569278 CRYBA4P53673 196 aa7.69□□□□□ -1.18
CHRFAM7A-206ENST00000569278 SUMO4Q6EEV6 95 aa7.69□□□□□ -1.18
CHRFAM7A-206ENST00000569278 RNASE8Q8TDE3 154 aaKnown RBP7.69□□□□□ -1.18
CHRFAM7A-206ENST00000569278 TMEM263Q8WUH6 116 aaKnown RBP7.69□□□□□ -1.18
CHRFAM7A-206ENST00000569278 PRO1933Q9H354 126 aa7.69□□□□□ -1.18
CHRFAM7A-206ENST00000569278 PAM16Q9Y3D7 125 aa7.69□□□□□ -1.18
CHRFAM7A-206ENST00000569278 TRBV10-1A0A0K0K1A3 114 aa7.68□□□□□ -1.18
CHRFAM7A-206ENST00000569278 I3L3M4 83 aa7.68□□□□□ -1.18
CHRFAM7A-206ENST00000569278 M0R143 59 aa7.68□□□□□ -1.18
CHRFAM7A-206ENST00000569278 SIVA1O15304 175 aa7.68□□□□□ -1.18
CHRFAM7A-206ENST00000569278 RS1O15537 224 aa7.68□□□□□ -1.18
CHRFAM7A-206ENST00000569278 PLNP26678 52 aa7.68□□□□□ -1.18
CHRFAM7A-206ENST00000569278 SMAGPQ0VAQ4 97 aa7.68□□□□□ -1.18
CHRFAM7A-206ENST00000569278 Q6ZN92 141 aa7.68□□□□□ -1.18
CHRFAM7A-206ENST00000569278 C11orf72Q8NBR9 251 aa7.68□□□□□ -1.18
CHRFAM7A-206ENST00000569278 C16orf74Q96GX8 76 aa7.68□□□□□ -1.18
CHRFAM7A-206ENST00000569278 CYSLTR1Q9Y271 337 aa7.68□□□□□ -1.18
CHRFAM7A-206ENST00000569278 SDHAF1A6NFY7 115 aa7.67□□□□□ -1.18
CHRFAM7A-206ENST00000569278 DLEU1O43261 78 aa7.67□□□□□ -1.18
CHRFAM7A-206ENST00000569278 ATP5G1P05496 136 aa7.67□□□□□ -1.18
CHRFAM7A-206ENST00000569278 GATA1P15976 413 aaPredicted RBP7.67□□□□□ -1.18
CHRFAM7A-206ENST00000569278 C14orf144Q96I85 54 aa7.67□□□□□ -1.18
CHRFAM7A-206ENST00000569278 SCGB3A1Q96QR1 104 aa7.67□□□□□ -1.18
CHRFAM7A-206ENST00000569278 TIMM17AQ99595 171 aa7.67□□□□□ -1.18
CHRFAM7A-206ENST00000569278 UPK3BQ9BT76 320 aa7.67□□□□□ -1.18
CHRFAM7A-206ENST00000569278 Q9H8V8 135 aa7.67□□□□□ -1.18
CHRFAM7A-206ENST00000569278 TNFRSF18Q9Y5U5 241 aa7.67□□□□□ -1.18
CHRFAM7A-206ENST00000569278 FAT3Q8TDW7 4589 aa7.66□□□□□ -1.18
CHRFAM7A-206ENST00000569278 A0A087WX48 190 aa7.66□□□□□ -1.18
CHRFAM7A-206ENST00000569278 TRAV26-2A0A0B4J265 109 aa7.66□□□□□ -1.18
CHRFAM7A-206ENST00000569278 IGHV3-53P01767 116 aa7.66□□□□□ -1.18
CHRFAM7A-206ENST00000569278 CCL18P55774 89 aa7.66□□□□□ -1.18
CHRFAM7A-206ENST00000569278 ESRGQ1W209 222 aa7.66□□□□□ -1.18
CHRFAM7A-206ENST00000569278 UFSP1Q6NVU6 142 aa7.66□□□□□ -1.18
CHRFAM7A-206ENST00000569278 LRP1Q07954 4544 aaKnown RBP7.66□□□□□ -1.18
CHRFAM7A-206ENST00000569278 TRAV26-1A0A087WT03 109 aa7.65□□□□□ -1.18
CHRFAM7A-206ENST00000569278 A0A087WWL8 130 aa7.65□□□□□ -1.18
CHRFAM7A-206ENST00000569278 DPM2O94777 84 aa7.65□□□□□ -1.18
CHRFAM7A-206ENST00000569278 GAS8-AS1O95177 125 aa7.65□□□□□ -1.18
CHRFAM7A-206ENST00000569278 XGP55808 180 aa7.65□□□□□ -1.18
CHRFAM7A-206ENST00000569278 ZNF56Q15929 161 aa7.65□□□□□ -1.18
CHRFAM7A-206ENST00000569278 FLG2Q5D862 2391 aaPredicted RBP7.65□□□□□ -1.18
CHRFAM7A-206ENST00000569278 CFAP126Q5VTH2 177 aa7.65□□□□□ -1.18
CHRFAM7A-206ENST00000569278 SLC25A34Q6PIV7 304 aa7.65□□□□□ -1.18
CHRFAM7A-206ENST00000569278 C2orf66Q6UXQ4 117 aa7.65□□□□□ -1.18
CHRFAM7A-206ENST00000569278 LINC00173Q6ZV60 143 aa7.65□□□□□ -1.18
CHRFAM7A-206ENST00000569278 C18orf15Q96N68 181 aa7.65□□□□□ -1.18
CHRFAM7A-206ENST00000569278 NOP10Q9NPE3 64 aaKnown RBP7.65□□□□□ -1.18
CHRFAM7A-206ENST00000569278 SRRM2Q9UQ35 2752 aaKnown RBP7.65□□□□□ -1.18
CHRFAM7A-206ENST00000569278 PYGO1Q9Y3Y4 419 aa7.65□□□□□ -1.18
CHRFAM7A-206ENST00000569278 UBR4Q5T4S7 5183 aa7.64□□□□□ -1.19
CHRFAM7A-206ENST00000569278 TRAV4A0A0B4J268 109 aa7.64□□□□□ -1.19
CHRFAM7A-206ENST00000569278 IGKCP01834 107 aa7.64□□□□□ -1.19
CHRFAM7A-206ENST00000569278 HTN1P15515 57 aa7.64□□□□□ -1.19
CHRFAM7A-206ENST00000569278 CTAG1AP78358 180 aa7.64□□□□□ -1.19
CHRFAM7A-206ENST00000569278 FAM74A4Q5TZK3 123 aa7.64□□□□□ -1.19
CHRFAM7A-206ENST00000569278 OR4C5Q8NGB2 326 aa7.64□□□□□ -1.19
CHRFAM7A-206ENST00000569278 RPL39LQ96EH5 51 aaKnown RBP7.64□□□□□ -1.19
CHRFAM7A-206ENST00000569278 PLA2G2DQ9UNK4 145 aa7.64□□□□□ -1.19
CHRFAM7A-206ENST00000569278 A0A0J9YY99 117 aa7.63□□□□□ -1.19
CHRFAM7A-206ENST00000569278 IGIPA6NJ69 53 aa7.63□□□□□ -1.19
CHRFAM7A-206ENST00000569278 F8VRH5 84 aa7.63□□□□□ -1.19
CHRFAM7A-206ENST00000569278 COX8AP10176 69 aa7.63□□□□□ -1.19
CHRFAM7A-206ENST00000569278 HNRNPA3P51991 378 aaKnown RBP7.63□□□□□ -1.19
CHRFAM7A-206ENST00000569278 ODF1Q14990 250 aa7.63□□□□□ -1.19
CHRFAM7A-206ENST00000569278 BOD1L2Q8IYS8 172 aa7.63□□□□□ -1.19
CHRFAM7A-206ENST00000569278 NEXN-AS1Q8NBZ9 246 aa7.63□□□□□ -1.19
CHRFAM7A-206ENST00000569278 VSIG2Q96IQ7 327 aa7.63□□□□□ -1.19
CHRFAM7A-206ENST00000569278 C2orf88Q9BSF0 95 aa7.63□□□□□ -1.19
CHRFAM7A-206ENST00000569278 JPT2Q9H910 190 aa7.63□□□□□ -1.19
CHRFAM7A-206ENST00000569278 PMVKQ15126 192 aa7.62□□□□□ -1.19
CHRFAM7A-206ENST00000569278 TMEM97Q5BJF2 176 aa7.62□□□□□ -1.19
CHRFAM7A-206ENST00000569278 TTC32Q5I0X7 151 aa7.62□□□□□ -1.19
CHRFAM7A-206ENST00000569278 DAZ4Q86SG3 579 aaKnown RBP7.62□□□□□ -1.19
CHRFAM7A-206ENST00000569278 DAZ3Q9NR90 486 aaKnown RBP7.62□□□□□ -1.19
CHRFAM7A-206ENST00000569278 HHLA3Q9XRX5 114 aa7.62□□□□□ -1.19
CHRFAM7A-206ENST00000569278 A0A096LPF7 62 aa7.61□□□□□ -1.19
CHRFAM7A-206ENST00000569278 EPM2AB3EWF7 344 aa7.61□□□□□ -1.19
CHRFAM7A-206ENST00000569278 C20orf203Q8NBC4 194 aa7.61□□□□□ -1.19
CHRFAM7A-206ENST00000569278 PKHD1L1Q86WI1 4243 aa7.61□□□□□ -1.19
CHRFAM7A-206ENST00000569278 TRBV7-3A0A075B6L6 115 aa7.6□□□□□ -1.19
CHRFAM7A-206ENST00000569278 TRBV6-4A0A1B0GX49 114 aa7.6□□□□□ -1.19
CHRFAM7A-206ENST00000569278 GAGE12BA1L429 117 aa7.6□□□□□ -1.19
CHRFAM7A-206ENST00000569278 GAGE7O76087 117 aa7.6□□□□□ -1.19
CHRFAM7A-206ENST00000569278 GAGE12FP0CL80 117 aa7.6□□□□□ -1.19
CHRFAM7A-206ENST00000569278 GAGE12GP0CL81 117 aa7.6□□□□□ -1.19
CHRFAM7A-206ENST00000569278 GAGE12IP0CL82 117 aa7.6□□□□□ -1.19
CHRFAM7A-206ENST00000569278 DNAH10OSP0CZ25 163 aa7.6□□□□□ -1.19
CHRFAM7A-206ENST00000569278 KRTAP10-1P60331 282 aa7.6□□□□□ -1.19
CHRFAM7A-206ENST00000569278 RPL36AP83881 106 aaKnown RBP7.6□□□□□ -1.19
CHRFAM7A-206ENST00000569278 Q5VSD8 79 aa7.6□□□□□ -1.19
CHRFAM7A-206ENST00000569278 Q6ZTI0 123 aa7.6□□□□□ -1.19
CHRFAM7A-206ENST00000569278 ATOH7Q8N100 152 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms