RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 PSCAO43653 123 aa9.75□□□□□ -0.85
COMMD4-225ENST00000569245 HBDP02042 147 aa9.75□□□□□ -0.85
COMMD4-225ENST00000569245 FAM19A2Q8N3H0 131 aa9.75□□□□□ -0.85
COMMD4-225ENST00000569245 C20orf203Q8NBC4 194 aa9.75□□□□□ -0.85
COMMD4-225ENST00000569245 DEFB104AQ8WTQ1 72 aa9.75□□□□□ -0.85
COMMD4-225ENST00000569245 PACRGQ96M98 296 aaPredicted RBP9.75□□□□□ -0.85
COMMD4-225ENST00000569245 Q9HAA7 133 aa9.75□□□□□ -0.85
COMMD4-225ENST00000569245 TRBV25-1A0A075B6N4 114 aa9.74□□□□□ -0.85
COMMD4-225ENST00000569245 TRBV6-8A0A0A6YYG3 113 aa9.74□□□□□ -0.85
COMMD4-225ENST00000569245 LINC01549A6NIU2 74 aa9.74□□□□□ -0.85
COMMD4-225ENST00000569245 IBA57-AS1B1ANH7 110 aa9.74□□□□□ -0.85
COMMD4-225ENST00000569245 AMTP48728 403 aa9.74□□□□□ -0.85
COMMD4-225ENST00000569245 PMCHL1Q16048 86 aa9.74□□□□□ -0.85
COMMD4-225ENST00000569245 RYR1P21817 5038 aa9.73□□□□□ -0.85
COMMD4-225ENST00000569245 PDZD11Q5EBL8 140 aa9.73□□□□□ -0.85
COMMD4-225ENST00000569245 C2orf66Q6UXQ4 117 aa9.73□□□□□ -0.85
COMMD4-225ENST00000569245 TMEM18Q96B42 140 aa9.73□□□□□ -0.85
COMMD4-225ENST00000569245 TOMM6Q96B49 74 aa9.73□□□□□ -0.85
COMMD4-225ENST00000569245 PCLOQ9Y6V0 5065 aa9.72□□□□□ -0.85
COMMD4-225ENST00000569245 A0A087WTM6 91 aa9.72□□□□□ -0.85
COMMD4-225ENST00000569245 H7C423 109 aa9.72□□□□□ -0.85
COMMD4-225ENST00000569245 S100A2P29034 98 aa9.72□□□□□ -0.85
COMMD4-225ENST00000569245 TMEM243Q9BU79 118 aa9.72□□□□□ -0.85
COMMD4-225ENST00000569245 PGPEP1Q9NXJ5 209 aa9.72□□□□□ -0.85
COMMD4-225ENST00000569245 CYSLTR1Q9Y271 337 aa9.72□□□□□ -0.85
COMMD4-225ENST00000569245 IFITM10A6NMD0 228 aa9.71□□□□□ -0.86
COMMD4-225ENST00000569245 LEPROTL1O95214 131 aa9.71□□□□□ -0.86
COMMD4-225ENST00000569245 FUSP35637 526 aaKnown RBP eCLIP9.71□□□□□ -0.86
COMMD4-225ENST00000569245 Q8N3U1 123 aa9.71□□□□□ -0.86
COMMD4-225ENST00000569245 HIST1H2BLQ99880 126 aa9.71□□□□□ -0.86
COMMD4-225ENST00000569245 LRP1BQ9NZR2 4599 aa9.71□□□□□ -0.86
COMMD4-225ENST00000569245 RPL39P62891 51 aaKnown RBP9.7□□□□□ -0.86
COMMD4-225ENST00000569245 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.69□□□□□ -0.86
COMMD4-225ENST00000569245 A0A087WX48 190 aa9.69□□□□□ -0.86
COMMD4-225ENST00000569245 IGKV2-29A2NJV5 120 aaPredicted RBP9.69□□□□□ -0.86
COMMD4-225ENST00000569245 IGIPA6NJ69 53 aa9.69□□□□□ -0.86
COMMD4-225ENST00000569245 SMAGPQ0VAQ4 97 aa9.69□□□□□ -0.86
COMMD4-225ENST00000569245 MRPL52Q86TS9 123 aaKnown RBP9.69□□□□□ -0.86
COMMD4-225ENST00000569245 TIMM17AQ99595 171 aa9.69□□□□□ -0.86
COMMD4-225ENST00000569245 TIMM21Q9BVV7 248 aa9.69□□□□□ -0.86
COMMD4-225ENST00000569245 HSPB8Q9UJY1 196 aa9.69□□□□□ -0.86
COMMD4-225ENST00000569245 PYGO1Q9Y3Y4 419 aa9.69□□□□□ -0.86
COMMD4-225ENST00000569245 TRAV8-3A0A0A6YYJ7 113 aa9.68□□□□□ -0.86
COMMD4-225ENST00000569245 TMEM262E9PQX1 116 aa9.68□□□□□ -0.86
COMMD4-225ENST00000569245 UBE2L6O14933 153 aa9.68□□□□□ -0.86
COMMD4-225ENST00000569245 CDK2AP2O75956 126 aa9.68□□□□□ -0.86
COMMD4-225ENST00000569245 ATP5LO75964 103 aa9.68□□□□□ -0.86
COMMD4-225ENST00000569245 NPSP0C0P6 89 aa9.68□□□□□ -0.86
COMMD4-225ENST00000569245 FABP4P15090 132 aa9.68□□□□□ -0.86
COMMD4-225ENST00000569245 ERASQ7Z444 233 aa9.68□□□□□ -0.86
COMMD4-225ENST00000569245 SCGB3A1Q96QR1 104 aa9.68□□□□□ -0.86
COMMD4-225ENST00000569245 CHCHD5Q9BSY4 110 aa9.68□□□□□ -0.86
COMMD4-225ENST00000569245 TM2D2Q9BX73 214 aa9.68□□□□□ -0.86
COMMD4-225ENST00000569245 SPANXA1Q9NS26 97 aa9.68□□□□□ -0.86
COMMD4-225ENST00000569245 UBE2D4Q9Y2X8 147 aa9.68□□□□□ -0.86
COMMD4-225ENST00000569245 CSDC2Q9Y534 153 aaKnown RBP9.68□□□□□ -0.86
COMMD4-225ENST00000569245 FGF6P10767 208 aa9.67□□□□□ -0.86
COMMD4-225ENST00000569245 PKIAP61925 76 aa9.67□□□□□ -0.86
COMMD4-225ENST00000569245 CDPF1Q6NVV7 123 aa9.67□□□□□ -0.86
COMMD4-225ENST00000569245 TMEM141Q96I45 108 aa9.67□□□□□ -0.86
COMMD4-225ENST00000569245 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.66□□□□□ -0.86
COMMD4-225ENST00000569245 ZNF25P17030 456 aaPredicted RBP9.66□□□□□ -0.86
COMMD4-225ENST00000569245 GAGE6Q13070 117 aa9.66□□□□□ -0.86
COMMD4-225ENST00000569245 LINC00173Q6ZV60 143 aa9.66□□□□□ -0.86
COMMD4-225ENST00000569245 IFI27L1Q96BM0 104 aa9.66□□□□□ -0.86
COMMD4-225ENST00000569245 HSPG2P98160 4391 aa9.66□□□□□ -0.86
COMMD4-225ENST00000569245 DNAH5Q8TE73 4624 aa9.66□□□□□ -0.86
COMMD4-225ENST00000569245 A0A1B0GUV1 79 aa9.65□□□□□ -0.86
COMMD4-225ENST00000569245 FAM104AQ969W3 186 aa9.65□□□□□ -0.86
COMMD4-225ENST00000569245 KLK12Q9UKR0 248 aa9.65□□□□□ -0.86
COMMD4-225ENST00000569245 LRCOL1A6NCL2 159 aa9.64□□□□□ -0.87
COMMD4-225ENST00000569245 MRPS36P82909 103 aaKnown RBP9.64□□□□□ -0.87
COMMD4-225ENST00000569245 AMMECR1LQ6DCA0 310 aa9.64□□□□□ -0.87
COMMD4-225ENST00000569245 MAPKAPK5-AS1Q8N8E1 139 aa9.64□□□□□ -0.87
COMMD4-225ENST00000569245 RMI2Q96E14 147 aa9.64□□□□□ -0.87
COMMD4-225ENST00000569245 IGLV4-3A0A075B6K6 122 aa9.63□□□□□ -0.87
COMMD4-225ENST00000569245 IGLV5-52A0A0A0MRZ9 124 aa9.63□□□□□ -0.87
COMMD4-225ENST00000569245 PAPPA-AS1Q5QFB9 102 aa9.63□□□□□ -0.87
COMMD4-225ENST00000569245 DGAT2L7PQ6IED9 249 aa9.63□□□□□ -0.87
COMMD4-225ENST00000569245 UBE2WQ96B02 151 aa9.63□□□□□ -0.87
COMMD4-225ENST00000569245 TMEM101Q96IK0 257 aa9.63□□□□□ -0.87
COMMD4-225ENST00000569245 MAP1LC3CQ9BXW4 147 aa9.63□□□□□ -0.87
COMMD4-225ENST00000569245 COX11Q9Y6N1 276 aa9.63□□□□□ -0.87
COMMD4-225ENST00000569245 APOBP04114 4563 aaKnown RBP9.63□□□□□ -0.87
COMMD4-225ENST00000569245 IGKV2D-24A0A075B6R9 120 aa9.62□□□□□ -0.87
COMMD4-225ENST00000569245 LOC105371267A0A1B0GV96 52 aa9.62□□□□□ -0.87
COMMD4-225ENST00000569245 C3orf79P0CE67 100 aa9.62□□□□□ -0.87
COMMD4-225ENST00000569245 GCSHP23434 173 aa9.62□□□□□ -0.87
COMMD4-225ENST00000569245 RBX1P62877 108 aa9.62□□□□□ -0.87
COMMD4-225ENST00000569245 MPV17L2Q567V2 206 aa9.62□□□□□ -0.87
COMMD4-225ENST00000569245 Q6ZN92 141 aa9.62□□□□□ -0.87
COMMD4-225ENST00000569245 Q8N814 137 aa9.62□□□□□ -0.87
COMMD4-225ENST00000569245 OR5A1Q8NGJ0 315 aa9.62□□□□□ -0.87
COMMD4-225ENST00000569245 OR10D4PQ8NGN7 298 aa9.62□□□□□ -0.87
COMMD4-225ENST00000569245 BAALCQ8WXS3 180 aa9.62□□□□□ -0.87
COMMD4-225ENST00000569245 AMELXQ99217 191 aa9.62□□□□□ -0.87
COMMD4-225ENST00000569245 CDC42SE2Q9NRR3 84 aa9.62□□□□□ -0.87
COMMD4-225ENST00000569245 TRAV12-1A0A0B4J245 112 aa9.61□□□□□ -0.87
COMMD4-225ENST00000569245 SYS1-DBNDD2H3BUS1 97 aa9.61□□□□□ -0.87
COMMD4-225ENST00000569245 LECT2O14960 151 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms