RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 LINC00308Q8TCZ7 52 aa8.07□□□□□ -1.12
PALB2-206ENST00000568219 SND1-IT1Q9HBX3 110 aa8.07□□□□□ -1.12
PALB2-206ENST00000568219 COX7A2LO14548 114 aa8.06□□□□□ -1.12
PALB2-206ENST00000568219 HAMPP81172 84 aa8.06□□□□□ -1.12
PALB2-206ENST00000568219 HIST2H2BDQ6DRA6 164 aa8.06□□□□□ -1.12
PALB2-206ENST00000568219 STHQ8IWL8 128 aa8.06□□□□□ -1.12
PALB2-206ENST00000568219 TRGV4A0A0C4DH28 118 aa8.06□□□□□ -1.12
PALB2-206ENST00000568219 TIRAPP58753 221 aa8.06□□□□□ -1.12
PALB2-206ENST00000568219 EBI3Q14213 229 aa8.06□□□□□ -1.12
PALB2-206ENST00000568219 CDSNQ15517 529 aa8.06□□□□□ -1.12
PALB2-206ENST00000568219 Q6Q795 121 aa8.06□□□□□ -1.12
PALB2-206ENST00000568219 CCL19Q99731 98 aa8.06□□□□□ -1.12
PALB2-206ENST00000568219 A0A087WVE0 104 aa8.05□□□□□ -1.12
PALB2-206ENST00000568219 A0A0J9YX75 114 aa8.05□□□□□ -1.12
PALB2-206ENST00000568219 ATOX1O00244 68 aa8.05□□□□□ -1.12
PALB2-206ENST00000568219 ASH1LQ9NR48 2969 aaKnown RBP8.05□□□□□ -1.12
PALB2-206ENST00000568219 LAMTOR3Q9UHA4 124 aa8.05□□□□□ -1.12
PALB2-206ENST00000568219 MIR7-3HGQ8N6C7 128 aa8.05□□□□□ -1.12
PALB2-206ENST00000568219 LRRK2Q5S007 2527 aa8.04□□□□□ -1.12
PALB2-206ENST00000568219 TRAV23DV6A0A075B6W5 121 aa8.04□□□□□ -1.12
PALB2-206ENST00000568219 CLPSL2Q6UWE3 100 aa8.04□□□□□ -1.12
PALB2-206ENST00000568219 IGHV4-59P01825 116 aa8.04□□□□□ -1.12
PALB2-206ENST00000568219 SBSPONQ8IVN8 264 aa8.04□□□□□ -1.12
PALB2-206ENST00000568219 DSCR8Q96T75 97 aa8.04□□□□□ -1.12
PALB2-206ENST00000568219 Q9UF83 564 aa8.04□□□□□ -1.12
PALB2-206ENST00000568219 TRAV13-2A0A0B4J235 113 aa8.03□□□□□ -1.12
PALB2-206ENST00000568219 MALP21145 153 aa8.03□□□□□ -1.12
PALB2-206ENST00000568219 RNF152Q8N8N0 203 aa8.03□□□□□ -1.12
PALB2-206ENST00000568219 MUC4Q99102 2169 aa8.03□□□□□ -1.12
PALB2-206ENST00000568219 NCR3O14931 201 aa8.03□□□□□ -1.12
PALB2-206ENST00000568219 TMEM86BQ8N661 226 aa8.03□□□□□ -1.12
PALB2-206ENST00000568219 IGHV4-61A0A0C4DH41 118 aa8.03□□□□□ -1.12
PALB2-206ENST00000568219 LINC00315P59091 139 aa8.03□□□□□ -1.12
PALB2-206ENST00000568219 FAM19A5Q7Z5A7 132 aaPredicted RBP8.03□□□□□ -1.12
PALB2-206ENST00000568219 LAMA5O15230 3695 aa8.03□□□□□ -1.12
PALB2-206ENST00000568219 SMG1Q96Q15 3661 aaKnown RBP8.03□□□□□ -1.12
PALB2-206ENST00000568219 TRBV6-5A0A0K0K1A5 114 aa8.03□□□□□ -1.12
PALB2-206ENST00000568219 WFDC9Q8NEX5 89 aa8.03□□□□□ -1.12
PALB2-206ENST00000568219 KIF25-AS1Q9Y6Z4 181 aa8.03□□□□□ -1.12
PALB2-206ENST00000568219 CSMD1Q96PZ7 3565 aa8.02□□□□□ -1.13
PALB2-206ENST00000568219 KLLNB2CW77 178 aa8.02□□□□□ -1.13
PALB2-206ENST00000568219 RPL35AP18077 110 aaKnown RBP8.02□□□□□ -1.13
PALB2-206ENST00000568219 EIF4EBP3O60516 100 aaPredicted RBP8.01□□□□□ -1.13
PALB2-206ENST00000568219 A0A096LPF7 62 aa8.01□□□□□ -1.13
PALB2-206ENST00000568219 INSP01308 110 aa8.01□□□□□ -1.13
PALB2-206ENST00000568219 SLURP1P55000 103 aa8.01□□□□□ -1.13
PALB2-206ENST00000568219 S100A7L2Q5SY68 101 aa8.01□□□□□ -1.13
PALB2-206ENST00000568219 C20orf197Q8N268 126 aa8.01□□□□□ -1.13
PALB2-206ENST00000568219 COL12A1Q99715 3063 aa8.01□□□□□ -1.13
PALB2-206ENST00000568219 DEFB130BP0DP73 79 aa8.01□□□□□ -1.13
PALB2-206ENST00000568219 DEFB130AP0DP74 79 aa8.01□□□□□ -1.13
PALB2-206ENST00000568219 LMO4P61968 165 aa8.01□□□□□ -1.13
PALB2-206ENST00000568219 COX7CP15954 63 aa8□□□□□ -1.13
PALB2-206ENST00000568219 C5orf47Q569G3 176 aa8□□□□□ -1.13
PALB2-206ENST00000568219 Q8N2B8 174 aa8□□□□□ -1.13
PALB2-206ENST00000568219 C10orf105Q8TEF2 133 aa8□□□□□ -1.13
PALB2-206ENST00000568219 C1orf43Q9BWL3 253 aa8□□□□□ -1.13
PALB2-206ENST00000568219 EPG5Q9HCE0 2579 aa8□□□□□ -1.13
PALB2-206ENST00000568219 AKAP13Q12802 2813 aa8□□□□□ -1.13
PALB2-206ENST00000568219 MRPS36P82909 103 aaKnown RBP8□□□□□ -1.13
PALB2-206ENST00000568219 HIST2H2BCQ6DN03 193 aa8□□□□□ -1.13
PALB2-206ENST00000568219 DNAJC30Q96LL9 226 aa8□□□□□ -1.13
PALB2-206ENST00000568219 RBMY1FQ15415 496 aaKnown RBP8□□□□□ -1.13
PALB2-206ENST00000568219 IGHG2P01859 326 aa7.99□□□□□ -1.13
PALB2-206ENST00000568219 XCL1P47992 114 aa7.99□□□□□ -1.13
PALB2-206ENST00000568219 TMEM243Q9BU79 118 aa7.99□□□□□ -1.13
PALB2-206ENST00000568219 UBL5Q9BZL1 73 aa7.99□□□□□ -1.13
PALB2-206ENST00000568219 RNF223E7ERA6 249 aa7.99□□□□□ -1.13
PALB2-206ENST00000568219 ADORA2A-AS1P86434 159 aa7.99□□□□□ -1.13
PALB2-206ENST00000568219 COX6A2Q02221 97 aa7.99□□□□□ -1.13
PALB2-206ENST00000568219 AMELXQ99217 191 aa7.99□□□□□ -1.13
PALB2-206ENST00000568219 SPANXDQ9BXN6 97 aa7.99□□□□□ -1.13
PALB2-206ENST00000568219 NOP10Q9NPE3 64 aaKnown RBP7.99□□□□□ -1.13
PALB2-206ENST00000568219 SPANXCQ9NY87 97 aa7.99□□□□□ -1.13
PALB2-206ENST00000568219 IGF2-ASQ6U949 168 aa7.99□□□□□ -1.13
PALB2-206ENST00000568219 HRCT1Q6UXD1 115 aa7.99□□□□□ -1.13
PALB2-206ENST00000568219 SMIM9A6NGZ8 99 aa7.98□□□□□ -1.13
PALB2-206ENST00000568219 GHRHP01286 108 aa7.98□□□□□ -1.13
PALB2-206ENST00000568219 CSDC2Q9Y534 153 aaKnown RBP7.98□□□□□ -1.13
PALB2-206ENST00000568219 FAM240AA0A1B0GVK7 77 aa7.98□□□□□ -1.13
PALB2-206ENST00000568219 MSMBP08118 114 aa7.98□□□□□ -1.13
PALB2-206ENST00000568219 DEFB112Q30KQ8 113 aa7.98□□□□□ -1.13
PALB2-206ENST00000568219 DCANP1Q8TF63 244 aa7.98□□□□□ -1.13
PALB2-206ENST00000568219 C9orf85Q96MD7 179 aa7.98□□□□□ -1.13
PALB2-206ENST00000568219 UBE2D4Q9Y2X8 147 aa7.98□□□□□ -1.13
PALB2-206ENST00000568219 IMUPQ9GZP8 106 aa7.97□□□□□ -1.13
PALB2-206ENST00000568219 K7ENP7 123 aa7.97□□□□□ -1.13
PALB2-206ENST00000568219 NDUFA1O15239 70 aa7.97□□□□□ -1.13
PALB2-206ENST00000568219 Q6ZSN1 163 aa7.97□□□□□ -1.13
PALB2-206ENST00000568219 OVOL2Q9BRP0 275 aa7.97□□□□□ -1.13
PALB2-206ENST00000568219 USP17L23D6RBM5 183 aa7.97□□□□□ -1.13
PALB2-206ENST00000568219 ORMDL1Q9P0S3 153 aa7.97□□□□□ -1.13
PALB2-206ENST00000568219 K7EQG2 157 aa7.96□□□□□ -1.13
PALB2-206ENST00000568219 LINC00526Q96FQ7 95 aa7.96□□□□□ -1.13
PALB2-206ENST00000568219 RBM3P98179 157 aaKnown RBP7.96□□□□□ -1.14
PALB2-206ENST00000568219 PYGO1Q9Y3Y4 419 aa7.96□□□□□ -1.14
PALB2-206ENST00000568219 NRGNQ92686 78 aa7.95□□□□□ -1.14
PALB2-206ENST00000568219 HTN3P15516 51 aa7.95□□□□□ -1.14
PALB2-206ENST00000568219 ENHOQ6UWT2 76 aa7.95□□□□□ -1.14
PALB2-206ENST00000568219 COX7B2Q8TF08 81 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms