RNA–Protein interactions for RNA: ENST00000568158.1

CNOT1-213, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-213ENST00000568158 PHOX2AO14813 284 aa8.55□□□□□ -1.04
CNOT1-213ENST00000568158 TCAPO15273 167 aa8.55□□□□□ -1.04
CNOT1-213ENST00000568158 HLA-DQA1P01909 254 aa8.55□□□□□ -1.04
CNOT1-213ENST00000568158 KRTAP10-1P60331 282 aa8.55□□□□□ -1.04
CNOT1-213ENST00000568158 KIAA1644Q3SXP7 199 aa8.55□□□□□ -1.04
CNOT1-213ENST00000568158 CDPF1Q6NVV7 123 aa8.55□□□□□ -1.04
CNOT1-213ENST00000568158 SMIM2Q9BVW6 85 aa8.55□□□□□ -1.04
CNOT1-213ENST00000568158 KIAA1109Q2LD37 5005 aa8.54□□□□□ -1.04
CNOT1-213ENST00000568158 TRAV8-4A0A0B4J246 113 aa8.54□□□□□ -1.04
CNOT1-213ENST00000568158 GCSHP23434 173 aa8.54□□□□□ -1.04
CNOT1-213ENST00000568158 S100PP25815 95 aa8.54□□□□□ -1.04
CNOT1-213ENST00000568158 TMEM101Q96IK0 257 aa8.54□□□□□ -1.04
CNOT1-213ENST00000568158 TRAV9-1A0A075B6T8 112 aa8.53□□□□□ -1.04
CNOT1-213ENST00000568158 PRSS47A8MTI9 375 aa8.53□□□□□ -1.04
CNOT1-213ENST00000568158 ZNF25P17030 456 aaPredicted RBP8.53□□□□□ -1.04
CNOT1-213ENST00000568158 RHEBQ15382 184 aa8.53□□□□□ -1.04
CNOT1-213ENST00000568158 MRPL52Q86TS9 123 aaKnown RBP8.53□□□□□ -1.04
CNOT1-213ENST00000568158 SLC7A5P1Q8MH63 180 aa8.53□□□□□ -1.04
CNOT1-213ENST00000568158 OR5A1Q8NGJ0 315 aa8.53□□□□□ -1.04
CNOT1-213ENST00000568158 NTN5Q8WTR8 489 aaPredicted RBP8.53□□□□□ -1.04
CNOT1-213ENST00000568158 CDC42SE2Q9NRR3 84 aa8.53□□□□□ -1.04
CNOT1-213ENST00000568158 GAGE12HA6NDE8 117 aa8.52□□□□□ -1.05
CNOT1-213ENST00000568158 USP17L23D6RBM5 183 aa8.52□□□□□ -1.05
CNOT1-213ENST00000568158 DGAT2L7PQ6IED9 249 aa8.52□□□□□ -1.05
CNOT1-213ENST00000568158 ZNF664Q8N3J9 261 aa8.52□□□□□ -1.05
CNOT1-213ENST00000568158 UBE2D4Q9Y2X8 147 aa8.52□□□□□ -1.05
CNOT1-213ENST00000568158 RPL39P62891 51 aaKnown RBP8.51□□□□□ -1.05
CNOT1-213ENST00000568158 MAP1LC3AQ9H492 121 aa8.51□□□□□ -1.05
CNOT1-213ENST00000568158 HERC2O95714 4834 aa8.51□□□□□ -1.05
CNOT1-213ENST00000568158 RYR1P21817 5038 aa8.5□□□□□ -1.05
CNOT1-213ENST00000568158 LINC00959A0A1B0GUT2 108 aa8.5□□□□□ -1.05
CNOT1-213ENST00000568158 SNAPINO95295 136 aa8.5□□□□□ -1.05
CNOT1-213ENST00000568158 PRSS1P07477 247 aa8.5□□□□□ -1.05
CNOT1-213ENST00000568158 RAB5AP20339 215 aa8.5□□□□□ -1.05
CNOT1-213ENST00000568158 NDUFA5Q16718 116 aa8.5□□□□□ -1.05
CNOT1-213ENST00000568158 LINC01620Q4KN68 170 aa8.5□□□□□ -1.05
CNOT1-213ENST00000568158 RNASE13Q5GAN3 156 aaKnown RBP8.5□□□□□ -1.05
CNOT1-213ENST00000568158 SVBPQ8N300 66 aa8.5□□□□□ -1.05
CNOT1-213ENST00000568158 CHCHD10Q8WYQ3 142 aaPredicted RBP8.5□□□□□ -1.05
CNOT1-213ENST00000568158 TMEM18Q96B42 140 aa8.5□□□□□ -1.05
CNOT1-213ENST00000568158 GNB1LQ9BYB4 327 aa8.5□□□□□ -1.05
CNOT1-213ENST00000568158 KRTAP17-1Q9BYP8 105 aa8.5□□□□□ -1.05
CNOT1-213ENST00000568158 LAMTOR2Q9Y2Q5 125 aa8.5□□□□□ -1.05
CNOT1-213ENST00000568158 TGIF2-C20orf24A0A0A6YYL0 155 aa8.49□□□□□ -1.05
CNOT1-213ENST00000568158 CDK2AP2O75956 126 aa8.49□□□□□ -1.05
CNOT1-213ENST00000568158 Q8N8P6 123 aa8.49□□□□□ -1.05
CNOT1-213ENST00000568158 OPRPNQ99935 248 aaPredicted RBP8.49□□□□□ -1.05
CNOT1-213ENST00000568158 CSDC2Q9Y534 153 aaKnown RBP8.49□□□□□ -1.05
CNOT1-213ENST00000568158 APOBP04114 4563 aaKnown RBP8.49□□□□□ -1.05
CNOT1-213ENST00000568158 CCL25O15444 150 aa8.48□□□□□ -1.05
CNOT1-213ENST00000568158 XGP55808 180 aa8.48□□□□□ -1.05
CNOT1-213ENST00000568158 SMAGPQ0VAQ4 97 aa8.48□□□□□ -1.05
CNOT1-213ENST00000568158 C14orf177Q52M58 125 aa8.48□□□□□ -1.05
CNOT1-213ENST00000568158 FAM104AQ969W3 186 aa8.48□□□□□ -1.05
CNOT1-213ENST00000568158 TIMM21Q9BVV7 248 aa8.48□□□□□ -1.05
CNOT1-213ENST00000568158 FAM30AQ9NZY2 134 aa8.48□□□□□ -1.05
CNOT1-213ENST00000568158 IFI27P40305 119 aaPredicted RBP8.47□□□□□ -1.05
CNOT1-213ENST00000568158 XCL1P47992 114 aa8.47□□□□□ -1.05
CNOT1-213ENST00000568158 FABP9Q0Z7S8 132 aa8.47□□□□□ -1.05
CNOT1-213ENST00000568158 SS18Q15532 418 aa8.47□□□□□ -1.05
CNOT1-213ENST00000568158 COX19Q49B96 90 aa8.47□□□□□ -1.05
CNOT1-213ENST00000568158 Q6ZUT4 128 aa8.47□□□□□ -1.05
CNOT1-213ENST00000568158 MRPL18Q9H0U6 180 aaKnown RBP8.47□□□□□ -1.05
CNOT1-213ENST00000568158 FOXI1Q12951 378 aa8.46□□□□□ -1.06
CNOT1-213ENST00000568158 LCE3BQ5TA77 95 aa8.46□□□□□ -1.06
CNOT1-213ENST00000568158 ALKBH7Q9BT30 221 aaPredicted RBP8.46□□□□□ -1.06
CNOT1-213ENST00000568158 HSPG2P98160 4391 aa8.46□□□□□ -1.06
CNOT1-213ENST00000568158 DNAH8Q96JB1 4490 aa8.45□□□□□ -1.06
CNOT1-213ENST00000568158 TRAV13-1A0A0B4J241 112 aa8.45□□□□□ -1.06
CNOT1-213ENST00000568158 HAMPP81172 84 aa8.45□□□□□ -1.06
CNOT1-213ENST00000568158 hDV102S1A0JD36 115 aa8.44□□□□□ -1.06
CNOT1-213ENST00000568158 SLPIP03973 132 aa8.44□□□□□ -1.06
CNOT1-213ENST00000568158 C15orf56Q8N910 161 aa8.44□□□□□ -1.06
CNOT1-213ENST00000568158 PRSS3P2Q8NHM4 247 aa8.44□□□□□ -1.06
CNOT1-213ENST00000568158 KRTAP4-12Q9BQ66 201 aa8.44□□□□□ -1.06
CNOT1-213ENST00000568158 NXT2Q9NPJ8 142 aaKnown RBP8.44□□□□□ -1.06
CNOT1-213ENST00000568158 SPANXA1Q9NS26 97 aa8.44□□□□□ -1.06
CNOT1-213ENST00000568158 TRAPPC1Q9Y5R8 145 aa8.44□□□□□ -1.06
CNOT1-213ENST00000568158 C1orf196B1AJZ1 125 aa8.43□□□□□ -1.06
CNOT1-213ENST00000568158 MT-ND6P03923 174 aa8.43□□□□□ -1.06
CNOT1-213ENST00000568158 MRPS36P82909 103 aaKnown RBP8.43□□□□□ -1.06
CNOT1-213ENST00000568158 HIGD2BQ4VC39 106 aa8.43□□□□□ -1.06
CNOT1-213ENST00000568158 CFAP161Q6P656 301 aa8.43□□□□□ -1.06
CNOT1-213ENST00000568158 CD164L2Q6UWJ8 174 aa8.43□□□□□ -1.06
CNOT1-213ENST00000568158 C2orf66Q6UXQ4 117 aa8.43□□□□□ -1.06
CNOT1-213ENST00000568158 YPEL4Q96NS1 127 aa8.43□□□□□ -1.06
CNOT1-213ENST00000568158 ORMDL2Q53FV1 153 aa8.42□□□□□ -1.06
CNOT1-213ENST00000568158 ZC2HC1BQ5TFG8 222 aa8.42□□□□□ -1.06
CNOT1-213ENST00000568158 C9orf163Q8N9P6 203 aa8.42□□□□□ -1.06
CNOT1-213ENST00000568158 KRTAP4-5Q9BYR2 181 aa8.42□□□□□ -1.06
CNOT1-213ENST00000568158 PYGO1Q9Y3Y4 419 aa8.42□□□□□ -1.06
CNOT1-213ENST00000568158 IGLV4-3A0A075B6K6 122 aa8.41□□□□□ -1.06
CNOT1-213ENST00000568158 C5orf38Q86SI9 138 aa8.41□□□□□ -1.06
CNOT1-213ENST00000568158 AP5S1Q9NUS5 200 aa8.41□□□□□ -1.06
CNOT1-213ENST00000568158 CYSLTR1Q9Y271 337 aa8.41□□□□□ -1.06
CNOT1-213ENST00000568158 K7EMI3 77 aa8.4□□□□□ -1.06
CNOT1-213ENST00000568158 SMR3BP02814 79 aaPredicted RBP8.4□□□□□ -1.06
CNOT1-213ENST00000568158 CBLN2Q8IUK8 224 aa8.4□□□□□ -1.06
CNOT1-213ENST00000568158 LINC00526Q96FQ7 95 aa8.4□□□□□ -1.06
CNOT1-213ENST00000568158 IGHV1-58A0A0C4DH39 117 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms