RNA–Protein interactions for RNA: ENST00000568153.1

CAPN3-218, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-218ENST00000568153 DAZ3Q9NR90 486 aaKnown RBP4.33□□□□□ -1.72
CAPN3-218ENST00000568153 PAM16Q9Y3D7 125 aa4.33□□□□□ -1.72
CAPN3-218ENST00000568153 ATRQ13535 2644 aa4.32□□□□□ -1.72
CAPN3-218ENST00000568153 IGIPA6NJ69 53 aa4.32□□□□□ -1.72
CAPN3-218ENST00000568153 DEFB4AO15263 64 aa4.32□□□□□ -1.72
CAPN3-218ENST00000568153 UBE2D3P61077 147 aa4.32□□□□□ -1.72
CAPN3-218ENST00000568153 DAD1P61803 113 aa4.32□□□□□ -1.72
CAPN3-218ENST00000568153 UBE2D2P62837 147 aa4.32□□□□□ -1.72
CAPN3-218ENST00000568153 GAGE1Q13065 139 aa4.32□□□□□ -1.72
CAPN3-218ENST00000568153 GAGE4Q13068 117 aa4.32□□□□□ -1.72
CAPN3-218ENST00000568153 GAGE5Q13069 117 aa4.32□□□□□ -1.72
CAPN3-218ENST00000568153 DEFB121Q5J5C9 76 aa4.32□□□□□ -1.72
CAPN3-218ENST00000568153 PAPPA-AS1Q5QFB9 102 aa4.32□□□□□ -1.72
CAPN3-218ENST00000568153 Q8NAQ8 132 aa4.32□□□□□ -1.72
CAPN3-218ENST00000568153 TIMM17AQ99595 171 aa4.32□□□□□ -1.72
CAPN3-218ENST00000568153 PMCHL2Q9BQD1 86 aa4.32□□□□□ -1.72
CAPN3-218ENST00000568153 MIEN1Q9BRT3 115 aa4.32□□□□□ -1.72
CAPN3-218ENST00000568153 CST9LQ9H4G1 147 aa4.32□□□□□ -1.72
CAPN3-218ENST00000568153 IGHV3-38A0A0C4DH36 116 aa4.31□□□□□ -1.72
CAPN3-218ENST00000568153 TEX48A0A1B0GUV7 120 aa4.31□□□□□ -1.72
CAPN3-218ENST00000568153 DPM2O94777 84 aa4.31□□□□□ -1.72
CAPN3-218ENST00000568153 IGKCP01834 107 aa4.31□□□□□ -1.72
CAPN3-218ENST00000568153 RPL39P62891 51 aaKnown RBP4.31□□□□□ -1.72
CAPN3-218ENST00000568153 SMAGPQ0VAQ4 97 aa4.31□□□□□ -1.72
CAPN3-218ENST00000568153 PMVKQ15126 192 aa4.31□□□□□ -1.72
CAPN3-218ENST00000568153 MAJINQ3KP22 176 aa4.31□□□□□ -1.72
CAPN3-218ENST00000568153 BAALCQ8WXS3 180 aa4.31□□□□□ -1.72
CAPN3-218ENST00000568153 CHCHD7Q9BUK0 85 aa4.31□□□□□ -1.72
CAPN3-218ENST00000568153 GTSF1LQ9H1H1 148 aa4.31□□□□□ -1.72
CAPN3-218ENST00000568153 VCX2Q9H322 139 aa4.31□□□□□ -1.72
CAPN3-218ENST00000568153 PRO0255Q9UI72 69 aa4.31□□□□□ -1.72
CAPN3-218ENST00000568153 CHTOPQ9Y3Y2 248 aaKnown RBP4.31□□□□□ -1.72
CAPN3-218ENST00000568153 PYGO1Q9Y3Y4 419 aa4.31□□□□□ -1.72
CAPN3-218ENST00000568153 TENM1Q9UKZ4 2725 aa4.3□□□□□ -1.72
CAPN3-218ENST00000568153 hDV102S1A0JD36 115 aa4.3□□□□□ -1.72
CAPN3-218ENST00000568153 ATP5G1P05496 136 aa4.3□□□□□ -1.72
CAPN3-218ENST00000568153 PLNP26678 52 aa4.3□□□□□ -1.72
CAPN3-218ENST00000568153 DDTP30046 118 aa4.3□□□□□ -1.72
CAPN3-218ENST00000568153 CRYBA4P53673 196 aa4.3□□□□□ -1.72
CAPN3-218ENST00000568153 TMEM97Q5BJF2 176 aa4.3□□□□□ -1.72
CAPN3-218ENST00000568153 SPANXA1Q9NS26 97 aa4.3□□□□□ -1.72
CAPN3-218ENST00000568153 MRPL35Q9NZE8 188 aaKnown RBP4.3□□□□□ -1.72
CAPN3-218ENST00000568153 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.29□□□□□ -1.72
CAPN3-218ENST00000568153 LOC100131303A0A0U1RQF7 123 aa4.29□□□□□ -1.72
CAPN3-218ENST00000568153 IGKV2-29A2NJV5 120 aaPredicted RBP4.29□□□□□ -1.72
CAPN3-218ENST00000568153 F5H768 121 aa4.29□□□□□ -1.72
CAPN3-218ENST00000568153 F8VRH5 84 aa4.29□□□□□ -1.72
CAPN3-218ENST00000568153 H7C423 109 aa4.29□□□□□ -1.72
CAPN3-218ENST00000568153 IGLC3P0DOY3 106 aa4.29□□□□□ -1.72
CAPN3-218ENST00000568153 KPRPQ5T749 579 aaPredicted RBP4.29□□□□□ -1.72
CAPN3-218ENST00000568153 NTM-AS1Q6ZSK4 140 aa4.29□□□□□ -1.72
CAPN3-218ENST00000568153 STPG4Q8N801 248 aa4.29□□□□□ -1.72
CAPN3-218ENST00000568153 ATP6V0E2Q8NHE4 81 aa4.29□□□□□ -1.72
CAPN3-218ENST00000568153 C14orf144Q96I85 54 aa4.29□□□□□ -1.72
CAPN3-218ENST00000568153 OPRPNQ99935 248 aaPredicted RBP4.29□□□□□ -1.72
CAPN3-218ENST00000568153 TIMM21Q9BVV7 248 aa4.29□□□□□ -1.72
CAPN3-218ENST00000568153 UQCR10Q9UDW1 63 aa4.29□□□□□ -1.72
CAPN3-218ENST00000568153 STAB1Q9NY15 2570 aa4.28□□□□□ -1.72
CAPN3-218ENST00000568153 NOTCH3Q9UM47 2321 aa4.28□□□□□ -1.72
CAPN3-218ENST00000568153 IGLV4-3A0A075B6K6 122 aa4.28□□□□□ -1.72
CAPN3-218ENST00000568153 TRBV25-1A0A075B6N4 114 aa4.28□□□□□ -1.72
CAPN3-218ENST00000568153 IGKV2D-30A0A075B6S6 120 aa4.28□□□□□ -1.72
CAPN3-218ENST00000568153 LINC00587B1AMM8 73 aa4.28□□□□□ -1.72
CAPN3-218ENST00000568153 UBE2L6O14933 153 aa4.28□□□□□ -1.72
CAPN3-218ENST00000568153 PRB2P02812 416 aaPredicted RBP4.28□□□□□ -1.72
CAPN3-218ENST00000568153 MRPS36P82909 103 aaKnown RBP4.28□□□□□ -1.72
CAPN3-218ENST00000568153 C12orf74Q32Q52 190 aa4.28□□□□□ -1.72
CAPN3-218ENST00000568153 AMMECR1LQ6DCA0 310 aa4.28□□□□□ -1.72
CAPN3-218ENST00000568153 SH2D6Q7Z4S9 175 aa4.28□□□□□ -1.72
CAPN3-218ENST00000568153 SBSPONQ8IVN8 264 aa4.28□□□□□ -1.72
CAPN3-218ENST00000568153 TMEM101Q96IK0 257 aa4.28□□□□□ -1.72
CAPN3-218ENST00000568153 AMELXQ99217 191 aa4.28□□□□□ -1.72
CAPN3-218ENST00000568153 TMEM243Q9BU79 118 aa4.28□□□□□ -1.72
CAPN3-218ENST00000568153 RETNQ9HD89 108 aa4.28□□□□□ -1.72
CAPN3-218ENST00000568153 CELA1Q9UNI1 258 aa4.28□□□□□ -1.72
CAPN3-218ENST00000568153 UBE2D4Q9Y2X8 147 aa4.28□□□□□ -1.72
CAPN3-218ENST00000568153 VWFP04275 2813 aa4.27□□□□□ -1.73
CAPN3-218ENST00000568153 TRBV6-8A0A0A6YYG3 113 aa4.27□□□□□ -1.73
CAPN3-218ENST00000568153 A0A0J9YY99 117 aa4.27□□□□□ -1.73
CAPN3-218ENST00000568153 K7EIL1 84 aa4.27□□□□□ -1.73
CAPN3-218ENST00000568153 PRSS2P07478 247 aa4.27□□□□□ -1.73
CAPN3-218ENST00000568153 COX8AP10176 69 aa4.27□□□□□ -1.73
CAPN3-218ENST00000568153 FGF6P10767 208 aa4.27□□□□□ -1.73
CAPN3-218ENST00000568153 HTN3P15516 51 aa4.27□□□□□ -1.73
CAPN3-218ENST00000568153 DEFA6Q01524 100 aa4.27□□□□□ -1.73
CAPN3-218ENST00000568153 MRPL23Q16540 153 aaKnown RBP4.27□□□□□ -1.73
CAPN3-218ENST00000568153 ZC2HC1BQ5TFG8 222 aa4.27□□□□□ -1.73
CAPN3-218ENST00000568153 SLC25A34Q6PIV7 304 aa4.27□□□□□ -1.73
CAPN3-218ENST00000568153 CEMP1Q6PRD7 247 aaPredicted RBP4.27□□□□□ -1.73
CAPN3-218ENST00000568153 MRPL52Q86TS9 123 aaKnown RBP4.27□□□□□ -1.73
CAPN3-218ENST00000568153 VSIG2Q96IQ7 327 aa4.27□□□□□ -1.73
CAPN3-218ENST00000568153 C11orf68Q9H3H3 251 aaKnown RBP4.27□□□□□ -1.73
CAPN3-218ENST00000568153 CSDC2Q9Y534 153 aaKnown RBP4.27□□□□□ -1.73
CAPN3-218ENST00000568153 TRAV26-1A0A087WT03 109 aa4.26□□□□□ -1.73
CAPN3-218ENST00000568153 LINC00694P0DN24 101 aa4.26□□□□□ -1.73
CAPN3-218ENST00000568153 HERVK_113P61574 105 aa4.26□□□□□ -1.73
CAPN3-218ENST00000568153 NFE4Q86UQ8 179 aa4.26□□□□□ -1.73
CAPN3-218ENST00000568153 OR5A1Q8NGJ0 315 aa4.26□□□□□ -1.73
CAPN3-218ENST00000568153 C11orf45Q8TAV5 145 aa4.26□□□□□ -1.73
CAPN3-218ENST00000568153 MRAPQ8TCY5 172 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms