RNA–Protein interactions for RNA: ENST00000567399.5

COMMD4-219, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 976 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-219ENST00000567399 DNAH2Q9P225 4427 aa10.05□□□□□ -0.8
COMMD4-219ENST00000567399 IFI27P40305 119 aaPredicted RBP10.05□□□□□ -0.8
COMMD4-219ENST00000567399 KRTAP10-2P60368 255 aa10.05□□□□□ -0.8
COMMD4-219ENST00000567399 RPL39P62891 51 aaKnown RBP10.05□□□□□ -0.8
COMMD4-219ENST00000567399 SS18Q15532 418 aa10.05□□□□□ -0.8
COMMD4-219ENST00000567399 ORMDL2Q53FV1 153 aa10.05□□□□□ -0.8
COMMD4-219ENST00000567399 Q8N814 137 aa10.05□□□□□ -0.8
COMMD4-219ENST00000567399 MAPKAPK5-AS1Q8N8E1 139 aa10.05□□□□□ -0.8
COMMD4-219ENST00000567399 CDC42SE2Q9NRR3 84 aa10.05□□□□□ -0.8
COMMD4-219ENST00000567399 G0S2P27469 103 aa10.04□□□□□ -0.8
COMMD4-219ENST00000567399 CBLN2Q8IUK8 224 aa10.04□□□□□ -0.8
COMMD4-219ENST00000567399 ALKBH7Q9BT30 221 aaPredicted RBP10.04□□□□□ -0.8
COMMD4-219ENST00000567399 CSDC2Q9Y534 153 aaKnown RBP10.04□□□□□ -0.8
COMMD4-219ENST00000567399 IGLV5-52A0A0A0MRZ9 124 aa10.03□□□□□ -0.8
COMMD4-219ENST00000567399 GAGE12HA6NDE8 117 aa10.03□□□□□ -0.8
COMMD4-219ENST00000567399 K7EMI3 77 aa10.03□□□□□ -0.8
COMMD4-219ENST00000567399 FUSP35637 526 aaKnown RBP eCLIP10.03□□□□□ -0.8
COMMD4-219ENST00000567399 C14orf177Q52M58 125 aa10.03□□□□□ -0.8
COMMD4-219ENST00000567399 TIMM21Q9BVV7 248 aa10.03□□□□□ -0.8
COMMD4-219ENST00000567399 SPANXA1Q9NS26 97 aa10.03□□□□□ -0.8
COMMD4-219ENST00000567399 FRAS1Q86XX4 4008 aa10.02□□□□□ -0.8
COMMD4-219ENST00000567399 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.02□□□□□ -0.81
COMMD4-219ENST00000567399 WFDC2Q14508 124 aa10.02□□□□□ -0.81
COMMD4-219ENST00000567399 RNASE13Q5GAN3 156 aaKnown RBP10.02□□□□□ -0.81
COMMD4-219ENST00000567399 CDPF1Q6NVV7 123 aa10.02□□□□□ -0.81
COMMD4-219ENST00000567399 FA2HQ7L5A8 372 aa10.02□□□□□ -0.81
COMMD4-219ENST00000567399 NTN5Q8WTR8 489 aaPredicted RBP10.02□□□□□ -0.81
COMMD4-219ENST00000567399 CHCHD10Q8WYQ3 142 aaPredicted RBP10.02□□□□□ -0.81
COMMD4-219ENST00000567399 CYSLTR1Q9Y271 337 aa10.02□□□□□ -0.81
COMMD4-219ENST00000567399 LINC00959A0A1B0GUT2 108 aa10.01□□□□□ -0.81
COMMD4-219ENST00000567399 XCL1P47992 114 aa10.01□□□□□ -0.81
COMMD4-219ENST00000567399 Q6ZUT4 128 aa10.01□□□□□ -0.81
COMMD4-219ENST00000567399 TRAV13-1A0A0B4J241 112 aa10□□□□□ -0.81
COMMD4-219ENST00000567399 USP17L23D6RBM5 183 aa10□□□□□ -0.81
COMMD4-219ENST00000567399 CCL25O15444 150 aa10□□□□□ -0.81
COMMD4-219ENST00000567399 C2orf66Q6UXQ4 117 aa10□□□□□ -0.81
COMMD4-219ENST00000567399 C1orf196B1AJZ1 125 aa9.99□□□□□ -0.81
COMMD4-219ENST00000567399 CFAP161Q6P656 301 aa9.99□□□□□ -0.81
COMMD4-219ENST00000567399 YPEL4Q96NS1 127 aa9.99□□□□□ -0.81
COMMD4-219ENST00000567399 DNAH17Q9UFH2 4485 aa9.98□□□□□ -0.81
COMMD4-219ENST00000567399 GCSHP23434 173 aa9.98□□□□□ -0.81
COMMD4-219ENST00000567399 KRTAP26-1Q6PEX3 210 aa9.98□□□□□ -0.81
COMMD4-219ENST00000567399 Q6ZN92 141 aa9.98□□□□□ -0.81
COMMD4-219ENST00000567399 OPRPNQ99935 248 aaPredicted RBP9.98□□□□□ -0.81
COMMD4-219ENST00000567399 PYGO1Q9Y3Y4 419 aa9.98□□□□□ -0.81
COMMD4-219ENST00000567399 hDV102S1A0JD36 115 aa9.97□□□□□ -0.81
COMMD4-219ENST00000567399 MRPS36P82909 103 aaKnown RBP9.97□□□□□ -0.81
COMMD4-219ENST00000567399 AP5S1Q9NUS5 200 aa9.97□□□□□ -0.81
COMMD4-219ENST00000567399 IFITM10A6NMD0 228 aa9.96□□□□□ -0.82
COMMD4-219ENST00000567399 RAB5BP61020 215 aa9.96□□□□□ -0.82
COMMD4-219ENST00000567399 CD164L2Q6UWJ8 174 aa9.96□□□□□ -0.82
COMMD4-219ENST00000567399 TMEM141Q96I45 108 aa9.96□□□□□ -0.82
COMMD4-219ENST00000567399 VCX2Q9H322 139 aa9.96□□□□□ -0.82
COMMD4-219ENST00000567399 LINC00614P0C842 121 aa9.95□□□□□ -0.82
COMMD4-219ENST00000567399 MALP21145 153 aa9.95□□□□□ -0.82
COMMD4-219ENST00000567399 PAPPA-AS1Q5QFB9 102 aa9.95□□□□□ -0.82
COMMD4-219ENST00000567399 TEX43Q6ZNM6 134 aa9.95□□□□□ -0.82
COMMD4-219ENST00000567399 C18orf32Q8TCD1 76 aa9.95□□□□□ -0.82
COMMD4-219ENST00000567399 SCGB3A1Q96QR1 104 aa9.95□□□□□ -0.82
COMMD4-219ENST00000567399 C2orf88Q9BSF0 95 aa9.95□□□□□ -0.82
COMMD4-219ENST00000567399 FAT2Q9NYQ8 4349 aa9.95□□□□□ -0.82
COMMD4-219ENST00000567399 IGLV4-3A0A075B6K6 122 aa9.94□□□□□ -0.82
COMMD4-219ENST00000567399 LINC01549A6NIU2 74 aa9.94□□□□□ -0.82
COMMD4-219ENST00000567399 PRSS1P07477 247 aa9.94□□□□□ -0.82
COMMD4-219ENST00000567399 FOXI1Q12951 378 aa9.94□□□□□ -0.82
COMMD4-219ENST00000567399 TOMM6Q96B49 74 aa9.94□□□□□ -0.82
COMMD4-219ENST00000567399 EPPK1P58107 5090 aaKnown RBP9.94□□□□□ -0.82
COMMD4-219ENST00000567399 COX7A2LO14548 114 aa9.92□□□□□ -0.82
COMMD4-219ENST00000567399 TRGC2P03986 189 aa9.92□□□□□ -0.82
COMMD4-219ENST00000567399 IGHV1-58A0A0C4DH39 117 aa9.91□□□□□ -0.82
COMMD4-219ENST00000567399 LINC01546A6NGU7 62 aa9.91□□□□□ -0.82
COMMD4-219ENST00000567399 IGIPA6NJ69 53 aa9.91□□□□□ -0.82
COMMD4-219ENST00000567399 SCO1O75880 301 aa9.91□□□□□ -0.82
COMMD4-219ENST00000567399 NPSP0C0P6 89 aa9.91□□□□□ -0.82
COMMD4-219ENST00000567399 HIGD2BQ4VC39 106 aa9.91□□□□□ -0.82
COMMD4-219ENST00000567399 ERASQ7Z444 233 aa9.91□□□□□ -0.82
COMMD4-219ENST00000567399 C5orf38Q86SI9 138 aa9.91□□□□□ -0.82
COMMD4-219ENST00000567399 TIMM17AQ99595 171 aa9.91□□□□□ -0.82
COMMD4-219ENST00000567399 PKD1P98161 4303 aa9.91□□□□□ -0.82
COMMD4-219ENST00000567399 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.9□□□□□ -0.82
COMMD4-219ENST00000567399 COLCA2A8K830 154 aa9.9□□□□□ -0.82
COMMD4-219ENST00000567399 ZNF561-AS1K7EIQ3 104 aa9.9□□□□□ -0.82
COMMD4-219ENST00000567399 APOMO95445 188 aa9.9□□□□□ -0.82
COMMD4-219ENST00000567399 KRTAP10-1P60331 282 aa9.9□□□□□ -0.82
COMMD4-219ENST00000567399 BAGE3Q86Y29 109 aa9.9□□□□□ -0.82
COMMD4-219ENST00000567399 FAM104AQ969W3 186 aa9.9□□□□□ -0.82
COMMD4-219ENST00000567399 HECTD4Q9Y4D8 3996 aa9.9□□□□□ -0.83
COMMD4-219ENST00000567399 LINC01620Q4KN68 170 aa9.89□□□□□ -0.83
COMMD4-219ENST00000567399 ZC2HC1BQ5TFG8 222 aa9.89□□□□□ -0.83
COMMD4-219ENST00000567399 C15orf56Q8N910 161 aa9.89□□□□□ -0.83
COMMD4-219ENST00000567399 HBDP02042 147 aa9.88□□□□□ -0.83
COMMD4-219ENST00000567399 PMCHL1Q16048 86 aa9.88□□□□□ -0.83
COMMD4-219ENST00000567399 AMELXQ99217 191 aa9.88□□□□□ -0.83
COMMD4-219ENST00000567399 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.87□□□□□ -0.83
COMMD4-219ENST00000567399 NDUFA6P56556 154 aa9.87□□□□□ -0.83
COMMD4-219ENST00000567399 CHCHD1Q96BP2 118 aaKnown RBP9.87□□□□□ -0.83
COMMD4-219ENST00000567399 GVQW2A0A096LPI5 108 aaPredicted RBP9.86□□□□□ -0.83
COMMD4-219ENST00000567399 CDK2AP2O75956 126 aa9.86□□□□□ -0.83
COMMD4-219ENST00000567399 S100A1P23297 94 aa9.86□□□□□ -0.83
COMMD4-219ENST00000567399 UBE2D1P51668 147 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms