RNA–Protein interactions for RNA: ENST00000567143.1

GINS3-206, Transcript of GINS complex subunit 3, humanhuman

Gene GINS3, Length 3,202 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-206ENST00000567143 LINC00467Q9BRT7 94 aa4.72□□□□□ -1.65
GINS3-206ENST00000567143 CDKN2A-AS1Q9UH64 79 aa4.72□□□□□ -1.65
GINS3-206ENST00000567143 K7EQG2 157 aa4.72□□□□□ -1.65
GINS3-206ENST00000567143 LEPROTO15243 131 aa4.72□□□□□ -1.65
GINS3-206ENST00000567143 PSMB8P28062 276 aa4.72□□□□□ -1.65
GINS3-206ENST00000567143 C2orf82Q6UX34 121 aa4.72□□□□□ -1.65
GINS3-206ENST00000567143 C9orf85Q96MD7 179 aa4.72□□□□□ -1.65
GINS3-206ENST00000567143 RS1O15537 224 aa4.72□□□□□ -1.65
GINS3-206ENST00000567143 SNCGO76070 127 aa4.72□□□□□ -1.65
GINS3-206ENST00000567143 LINC01620Q4KN68 170 aa4.72□□□□□ -1.65
GINS3-206ENST00000567143 POM121L12Q8N7R1 296 aa4.72□□□□□ -1.65
GINS3-206ENST00000567143 TMEM263Q8WUH6 116 aaKnown RBP4.72□□□□□ -1.65
GINS3-206ENST00000567143 TRGV1A0A0A0MS02 117 aa4.71□□□□□ -1.66
GINS3-206ENST00000567143 TMEM86BQ8N661 226 aa4.71□□□□□ -1.66
GINS3-206ENST00000567143 RBMY1BA6NDE4 496 aaKnown RBP4.71□□□□□ -1.66
GINS3-206ENST00000567143 RBMY1EA6NEQ0 496 aaKnown RBP4.71□□□□□ -1.66
GINS3-206ENST00000567143 M0R2P5 195 aa4.71□□□□□ -1.66
GINS3-206ENST00000567143 NXPH4O95158 308 aa4.71□□□□□ -1.66
GINS3-206ENST00000567143 RBMY1DP0C7P1 496 aaKnown RBP4.71□□□□□ -1.66
GINS3-206ENST00000567143 RPL13AP40429 203 aaKnown RBP4.71□□□□□ -1.66
GINS3-206ENST00000567143 ZFAND6Q6FIF0 208 aa4.71□□□□□ -1.66
GINS3-206ENST00000567143 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.71□□□□□ -1.66
GINS3-206ENST00000567143 DYNLRB2Q8TF09 96 aa4.71□□□□□ -1.66
GINS3-206ENST00000567143 TOMM7Q9P0U1 55 aa4.71□□□□□ -1.66
GINS3-206ENST00000567143 MED14OSP0DP75 135 aa4.7□□□□□ -1.66
GINS3-206ENST00000567143 GAGE2BQ13066 116 aa4.7□□□□□ -1.66
GINS3-206ENST00000567143 GAGE2EQ4V326 116 aa4.7□□□□□ -1.66
GINS3-206ENST00000567143 C11orf68Q9H3H3 251 aaKnown RBP4.7□□□□□ -1.66
GINS3-206ENST00000567143 GAGE2DQ9UEU5 116 aa4.7□□□□□ -1.66
GINS3-206ENST00000567143 MEIG1Q5JSS6 88 aa4.7□□□□□ -1.66
GINS3-206ENST00000567143 COX6A2Q02221 97 aa4.7□□□□□ -1.66
GINS3-206ENST00000567143 ATXN8Q156A1 80 aa4.7□□□□□ -1.66
GINS3-206ENST00000567143 C15orf53Q8NAA6 179 aa4.7□□□□□ -1.66
GINS3-206ENST00000567143 Q9H8V8 135 aa4.7□□□□□ -1.66
GINS3-206ENST00000567143 ICOSQ9Y6W8 199 aa4.7□□□□□ -1.66
GINS3-206ENST00000567143 TRGV11A0A075B6L2 103 aa4.69□□□□□ -1.66
GINS3-206ENST00000567143 TRAV8-4A0A0B4J246 113 aa4.69□□□□□ -1.66
GINS3-206ENST00000567143 GAGE12JA6NER3 117 aa4.69□□□□□ -1.66
GINS3-206ENST00000567143 LINC01619G3V211 115 aa4.69□□□□□ -1.66
GINS3-206ENST00000567143 LINC00694P0DN24 101 aa4.69□□□□□ -1.66
GINS3-206ENST00000567143 GAGE4Q13068 117 aa4.69□□□□□ -1.66
GINS3-206ENST00000567143 GAGE5Q13069 117 aa4.69□□□□□ -1.66
GINS3-206ENST00000567143 RHOHQ15669 191 aa4.69□□□□□ -1.66
GINS3-206ENST00000567143 NSUN5P1Q3KNT7 163 aa4.69□□□□□ -1.66
GINS3-206ENST00000567143 WFDC10AQ9H1F0 79 aa4.69□□□□□ -1.66
GINS3-206ENST00000567143 TRBV6-5A0A0K0K1A5 114 aa4.69□□□□□ -1.66
GINS3-206ENST00000567143 SCGB1A1P11684 91 aa4.69□□□□□ -1.66
GINS3-206ENST00000567143 PIK3CD-AS1Q5SR53 167 aa4.68□□□□□ -1.66
GINS3-206ENST00000567143 FAM104AQ969W3 186 aa4.68□□□□□ -1.66
GINS3-206ENST00000567143 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.68□□□□□ -1.66
GINS3-206ENST00000567143 IGHV1-58A0A0C4DH39 117 aa4.68□□□□□ -1.66
GINS3-206ENST00000567143 H3BMM0 161 aa4.68□□□□□ -1.66
GINS3-206ENST00000567143 CCDC179H3BU77 68 aa4.68□□□□□ -1.66
GINS3-206ENST00000567143 H3BUA1 57 aa4.68□□□□□ -1.66
GINS3-206ENST00000567143 K7EMT4 169 aa4.68□□□□□ -1.66
GINS3-206ENST00000567143 KLK9Q2XQG4 91 aa4.68□□□□□ -1.66
GINS3-206ENST00000567143 UBE2WQ96B02 151 aa4.68□□□□□ -1.66
GINS3-206ENST00000567143 H7C423 109 aa4.68□□□□□ -1.66
GINS3-206ENST00000567143 COX6CP09669 75 aa4.68□□□□□ -1.66
GINS3-206ENST00000567143 ATP6V0E2Q8NHE4 81 aa4.68□□□□□ -1.66
GINS3-206ENST00000567143 VSIG2Q96IQ7 327 aa4.68□□□□□ -1.66
GINS3-206ENST00000567143 HIVEP1P15822 2718 aa4.67□□□□□ -1.66
GINS3-206ENST00000567143 RPL35AP18077 110 aaKnown RBP4.67□□□□□ -1.66
GINS3-206ENST00000567143 Q6ZTI0 123 aa4.67□□□□□ -1.66
GINS3-206ENST00000567143 PRIMA1Q86XR5 153 aa4.67□□□□□ -1.66
GINS3-206ENST00000567143 Q8N2B8 174 aa4.67□□□□□ -1.66
GINS3-206ENST00000567143 LITAFQ99732 161 aa4.67□□□□□ -1.66
GINS3-206ENST00000567143 CHCHD7Q9BUK0 85 aa4.67□□□□□ -1.66
GINS3-206ENST00000567143 Q9HAA7 133 aa4.67□□□□□ -1.66
GINS3-206ENST00000567143 LOC100131303A0A0U1RQF7 123 aa4.67□□□□□ -1.66
GINS3-206ENST00000567143 UBE2D4Q9Y2X8 147 aa4.67□□□□□ -1.66
GINS3-206ENST00000567143 TMEM101Q96IK0 257 aa4.67□□□□□ -1.66
GINS3-206ENST00000567143 VPREB3Q9UKI3 123 aa4.67□□□□□ -1.66
GINS3-206ENST00000567143 FLNBO75369 2602 aaKnown RBP4.66□□□□□ -1.66
GINS3-206ENST00000567143 A0A0B4J2C4 111 aa4.66□□□□□ -1.66
GINS3-206ENST00000567143 TRBV7-9A0A0J9YWB2 115 aa4.66□□□□□ -1.66
GINS3-206ENST00000567143 MRPS36P82909 103 aaKnown RBP4.66□□□□□ -1.66
GINS3-206ENST00000567143 CHCHD5Q9BSY4 110 aa4.66□□□□□ -1.66
GINS3-206ENST00000567143 NOP10Q9NPE3 64 aaKnown RBP4.66□□□□□ -1.66
GINS3-206ENST00000567143 TENM1Q9UKZ4 2725 aa4.66□□□□□ -1.66
GINS3-206ENST00000567143 F8P00451 2351 aa4.66□□□□□ -1.66
GINS3-206ENST00000567143 A0A096LPF7 62 aa4.66□□□□□ -1.66
GINS3-206ENST00000567143 TRBV10-2A0A0K0K1G8 114 aa4.66□□□□□ -1.66
GINS3-206ENST00000567143 TMEM262E9PQX1 116 aa4.66□□□□□ -1.66
GINS3-206ENST00000567143 RPL32P62910 135 aaKnown RBP4.66□□□□□ -1.66
GINS3-206ENST00000567143 ZNF415Q09FC8 603 aa4.66□□□□□ -1.66
GINS3-206ENST00000567143 MIAQ16674 131 aa4.66□□□□□ -1.66
GINS3-206ENST00000567143 CLPSL2Q6UWE3 100 aa4.66□□□□□ -1.66
GINS3-206ENST00000567143 ZNF702PQ9H963 129 aa4.66□□□□□ -1.66
GINS3-206ENST00000567143 MAP6D1Q9H9H5 199 aa4.66□□□□□ -1.66
GINS3-206ENST00000567143 GAGE7O76087 117 aa4.65□□□□□ -1.66
GINS3-206ENST00000567143 GAGE12FP0CL80 117 aa4.65□□□□□ -1.66
GINS3-206ENST00000567143 GAGE12GP0CL81 117 aa4.65□□□□□ -1.66
GINS3-206ENST00000567143 GAGE12IP0CL82 117 aa4.65□□□□□ -1.66
GINS3-206ENST00000567143 PFN2P35080 140 aa4.65□□□□□ -1.66
GINS3-206ENST00000567143 HILS1P60008 231 aa4.65□□□□□ -1.66
GINS3-206ENST00000567143 STHQ8IWL8 128 aa4.65□□□□□ -1.66
GINS3-206ENST00000567143 ODF3Q96PU9 254 aa4.65□□□□□ -1.66
GINS3-206ENST00000567143 TRGV2A0A075B6R0 118 aa4.65□□□□□ -1.67
GINS3-206ENST00000567143 NHLRC4P0CG21 123 aaPredicted RBP4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms