RNA–Protein interactions for RNA: ENST00000567060.5

CLN6-208, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 945 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-208ENST00000567060 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.23□□□□□ -0.61
CLN6-208ENST00000567060 IGKV2-29A2NJV5 120 aaPredicted RBP11.23□□□□□ -0.61
CLN6-208ENST00000567060 LINC01546A6NGU7 62 aa11.23□□□□□ -0.61
CLN6-208ENST00000567060 MIAQ16674 131 aa11.23□□□□□ -0.61
CLN6-208ENST00000567060 PRSS3P2Q8NHM4 247 aa11.23□□□□□ -0.61
CLN6-208ENST00000567060 RAB5BP61020 215 aa11.22□□□□□ -0.61
CLN6-208ENST00000567060 RNASEKQ6P5S7 137 aaKnown RBP11.22□□□□□ -0.61
CLN6-208ENST00000567060 Q8N3U1 123 aa11.22□□□□□ -0.61
CLN6-208ENST00000567060 Q8N976 141 aa11.22□□□□□ -0.61
CLN6-208ENST00000567060 OR5A1Q8NGJ0 315 aa11.22□□□□□ -0.61
CLN6-208ENST00000567060 DEFB104AQ8WTQ1 72 aa11.22□□□□□ -0.61
CLN6-208ENST00000567060 SPANXA1Q9NS26 97 aa11.22□□□□□ -0.61
CLN6-208ENST00000567060 TRAV8-4A0A0B4J246 113 aa11.21□□□□□ -0.61
CLN6-208ENST00000567060 NPSP0C0P6 89 aa11.21□□□□□ -0.61
CLN6-208ENST00000567060 IFI27P40305 119 aaPredicted RBP11.21□□□□□ -0.61
CLN6-208ENST00000567060 DGAT2L7PQ6IED9 249 aa11.21□□□□□ -0.61
CLN6-208ENST00000567060 UBE2WQ96B02 151 aa11.21□□□□□ -0.61
CLN6-208ENST00000567060 Q6ZRN7 208 aaPredicted RBP11.2□□□□□ -0.62
CLN6-208ENST00000567060 C18orf32Q8TCD1 76 aa11.2□□□□□ -0.62
CLN6-208ENST00000567060 CYSLTR1Q9Y271 337 aa11.2□□□□□ -0.62
CLN6-208ENST00000567060 UBE2D4Q9Y2X8 147 aa11.2□□□□□ -0.62
CLN6-208ENST00000567060 PYGO1Q9Y3Y4 419 aa11.2□□□□□ -0.62
CLN6-208ENST00000567060 IGLV4-60A0A075B6I1 120 aa11.19□□□□□ -0.62
CLN6-208ENST00000567060 REG3AQ06141 175 aa11.19□□□□□ -0.62
CLN6-208ENST00000567060 FA2HQ7L5A8 372 aa11.19□□□□□ -0.62
CLN6-208ENST00000567060 LINC00269Q8N2A0 174 aa11.19□□□□□ -0.62
CLN6-208ENST00000567060 CCL25O15444 150 aa11.18□□□□□ -0.62
CLN6-208ENST00000567060 TRGC2P03986 189 aa11.18□□□□□ -0.62
CLN6-208ENST00000567060 MRPS36P82909 103 aaKnown RBP11.18□□□□□ -0.62
CLN6-208ENST00000567060 ENHOQ6UWT2 76 aa11.18□□□□□ -0.62
CLN6-208ENST00000567060 C1orf43Q9BWL3 253 aa11.18□□□□□ -0.62
CLN6-208ENST00000567060 CDC42SE2Q9NRR3 84 aa11.18□□□□□ -0.62
CLN6-208ENST00000567060 AP5S1Q9NUS5 200 aa11.18□□□□□ -0.62
CLN6-208ENST00000567060 SCO1O75880 301 aa11.17□□□□□ -0.62
CLN6-208ENST00000567060 C2orf66Q6UXQ4 117 aa11.17□□□□□ -0.62
CLN6-208ENST00000567060 ZNF664Q8N3J9 261 aa11.17□□□□□ -0.62
CLN6-208ENST00000567060 Q9HAA7 133 aa11.17□□□□□ -0.62
CLN6-208ENST00000567060 PSCAO43653 123 aa11.16□□□□□ -0.62
CLN6-208ENST00000567060 LINC00614P0C842 121 aa11.16□□□□□ -0.62
CLN6-208ENST00000567060 RPL39P62891 51 aaKnown RBP11.15□□□□□ -0.62
CLN6-208ENST00000567060 PAPPA-AS1Q5QFB9 102 aa11.15□□□□□ -0.62
CLN6-208ENST00000567060 CHCHD1Q96BP2 118 aaKnown RBP11.15□□□□□ -0.62
CLN6-208ENST00000567060 IGKV2D-24A0A075B6R9 120 aa11.14□□□□□ -0.63
CLN6-208ENST00000567060 TOMM6Q96B49 74 aa11.14□□□□□ -0.63
CLN6-208ENST00000567060 TIMM17AQ99595 171 aa11.14□□□□□ -0.63
CLN6-208ENST00000567060 EREGO14944 169 aa11.13□□□□□ -0.63
CLN6-208ENST00000567060 CDK2AP2O75956 126 aa11.12□□□□□ -0.63
CLN6-208ENST00000567060 Q6ZN92 141 aa11.12□□□□□ -0.63
CLN6-208ENST00000567060 MAPKAPK5-AS1Q8N8E1 139 aa11.12□□□□□ -0.63
CLN6-208ENST00000567060 TMEM141Q96I45 108 aa11.12□□□□□ -0.63
CLN6-208ENST00000567060 IGIPA6NJ69 53 aa11.11□□□□□ -0.63
CLN6-208ENST00000567060 SS18Q15532 418 aa11.11□□□□□ -0.63
CLN6-208ENST00000567060 CLPSL2Q6UWE3 100 aa11.11□□□□□ -0.63
CLN6-208ENST00000567060 ERASQ7Z444 233 aa11.11□□□□□ -0.63
CLN6-208ENST00000567060 LINC00959A0A1B0GUT2 108 aa11.1□□□□□ -0.63
CLN6-208ENST00000567060 C1orf196B1AJZ1 125 aa11.1□□□□□ -0.63
CLN6-208ENST00000567060 HBDP02042 147 aa11.1□□□□□ -0.63
CLN6-208ENST00000567060 Q6ZUT4 128 aa11.1□□□□□ -0.63
CLN6-208ENST00000567060 IGLV4-3A0A075B6K6 122 aa11.09□□□□□ -0.63
CLN6-208ENST00000567060 C16orf90A8MZG2 172 aa11.09□□□□□ -0.63
CLN6-208ENST00000567060 TNP2Q05952 138 aa11.09□□□□□ -0.63
CLN6-208ENST00000567060 BAGE3Q86Y29 109 aa11.09□□□□□ -0.63
CLN6-208ENST00000567060 URB1-AS1Q96HZ7 61 aa11.09□□□□□ -0.63
CLN6-208ENST00000567060 C2orf88Q9BSF0 95 aa11.09□□□□□ -0.63
CLN6-208ENST00000567060 A0A087WTM6 91 aa11.08□□□□□ -0.64
CLN6-208ENST00000567060 C14orf177Q52M58 125 aa11.08□□□□□ -0.64
CLN6-208ENST00000567060 KRTAP26-1Q6PEX3 210 aa11.08□□□□□ -0.64
CLN6-208ENST00000567060 TEX43Q6ZNM6 134 aa11.08□□□□□ -0.64
CLN6-208ENST00000567060 Q8N1X5 172 aa11.08□□□□□ -0.64
CLN6-208ENST00000567060 CHCHD10Q8WYQ3 142 aaPredicted RBP11.08□□□□□ -0.64
CLN6-208ENST00000567060 SCGB3A1Q96QR1 104 aa11.08□□□□□ -0.64
CLN6-208ENST00000567060 LRCOL1A6NCL2 159 aa11.07□□□□□ -0.64
CLN6-208ENST00000567060 FAM104AQ969W3 186 aa11.07□□□□□ -0.64
CLN6-208ENST00000567060 AMELXQ99217 191 aa11.07□□□□□ -0.64
CLN6-208ENST00000567060 VCX2Q9H322 139 aa11.07□□□□□ -0.64
CLN6-208ENST00000567060 IGKV3OR2-268A0A0C4DH90 116 aa11.06□□□□□ -0.64
CLN6-208ENST00000567060 HSBP1O75506 76 aa11.06□□□□□ -0.64
CLN6-208ENST00000567060 CD164L2Q6UWJ8 174 aa11.06□□□□□ -0.64
CLN6-208ENST00000567060 FAT1Q14517 4588 aa11.06□□□□□ -0.64
CLN6-208ENST00000567060 IGLV10-54A0A075B6I4 117 aa11.05□□□□□ -0.64
CLN6-208ENST00000567060 IFITM10A6NMD0 228 aa11.05□□□□□ -0.64
CLN6-208ENST00000567060 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.05□□□□□ -0.64
CLN6-208ENST00000567060 ATP5LO75964 103 aa11.05□□□□□ -0.64
CLN6-208ENST00000567060 SEC11AP67812 179 aa11.05□□□□□ -0.64
CLN6-208ENST00000567060 CFAP161Q6P656 301 aa11.05□□□□□ -0.64
CLN6-208ENST00000567060 A0A096LNJ9 63 aa11.04□□□□□ -0.64
CLN6-208ENST00000567060 TRAV13-1A0A0B4J241 112 aa11.04□□□□□ -0.64
CLN6-208ENST00000567060 HIST1H2BKO60814 126 aa11.04□□□□□ -0.64
CLN6-208ENST00000567060 HIST1H2BJP06899 126 aa11.04□□□□□ -0.64
CLN6-208ENST00000567060 HIST1H2BOP23527 126 aa11.04□□□□□ -0.64
CLN6-208ENST00000567060 HIST1H2BBP33778 126 aa11.04□□□□□ -0.64
CLN6-208ENST00000567060 HIST1H2BDP58876 126 aa11.04□□□□□ -0.64
CLN6-208ENST00000567060 HIST1H2BCP62807 126 aa11.04□□□□□ -0.64
CLN6-208ENST00000567060 HIST2H2BEQ16778 126 aa11.04□□□□□ -0.64
CLN6-208ENST00000567060 PDZD11Q5EBL8 140 aa11.04□□□□□ -0.64
CLN6-208ENST00000567060 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.04□□□□□ -0.64
CLN6-208ENST00000567060 CDPF1Q6NVV7 123 aa11.04□□□□□ -0.64
CLN6-208ENST00000567060 NTN5Q8WTR8 489 aaPredicted RBP11.04□□□□□ -0.64
CLN6-208ENST00000567060 HIST1H2BHQ93079 126 aa11.04□□□□□ -0.64
CLN6-208ENST00000567060 HIST1H2BNQ99877 126 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms