RNA–Protein interactions for RNA: ENST00000565848.1

NR4A1-221, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 2

Gene NR4A1, Length 691 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-221ENST00000565848 PDZD11Q5EBL8 140 aa8.4□□□□□ -1.06
NR4A1-221ENST00000565848 RNASEKQ6P5S7 137 aaKnown RBP8.4□□□□□ -1.06
NR4A1-221ENST00000565848 C2orf66Q6UXQ4 117 aa8.4□□□□□ -1.06
NR4A1-221ENST00000565848 CHCHD5Q9BSY4 110 aa8.4□□□□□ -1.06
NR4A1-221ENST00000565848 Q9H8V8 135 aa8.4□□□□□ -1.06
NR4A1-221ENST00000565848 IGLV4-60A0A075B6I1 120 aa8.39□□□□□ -1.07
NR4A1-221ENST00000565848 K7EP13 123 aa8.39□□□□□ -1.07
NR4A1-221ENST00000565848 G0S2P27469 103 aa8.39□□□□□ -1.07
NR4A1-221ENST00000565848 RBX1P62877 108 aa8.39□□□□□ -1.07
NR4A1-221ENST00000565848 GAGE6Q13070 117 aa8.39□□□□□ -1.07
NR4A1-221ENST00000565848 TMEM18Q96B42 140 aa8.39□□□□□ -1.07
NR4A1-221ENST00000565848 SPANXA1Q9NS26 97 aa8.39□□□□□ -1.07
NR4A1-221ENST00000565848 CYSLTR1Q9Y271 337 aa8.39□□□□□ -1.07
NR4A1-221ENST00000565848 HBDP02042 147 aa8.38□□□□□ -1.07
NR4A1-221ENST00000565848 MRPS36P82909 103 aaKnown RBP8.38□□□□□ -1.07
NR4A1-221ENST00000565848 TIMM17AQ99595 171 aa8.38□□□□□ -1.07
NR4A1-221ENST00000565848 KRTAP1-5Q9BYS1 174 aa8.38□□□□□ -1.07
NR4A1-221ENST00000565848 CDC42SE2Q9NRR3 84 aa8.38□□□□□ -1.07
NR4A1-221ENST00000565848 PRR34Q9NV39 138 aa8.38□□□□□ -1.07
NR4A1-221ENST00000565848 HSBP1O75506 76 aa8.37□□□□□ -1.07
NR4A1-221ENST00000565848 GHRHP01286 108 aa8.37□□□□□ -1.07
NR4A1-221ENST00000565848 BTF3P20290 206 aaKnown RBP8.37□□□□□ -1.07
NR4A1-221ENST00000565848 NDUFA6P56556 154 aa8.37□□□□□ -1.07
NR4A1-221ENST00000565848 PMCHL1Q16048 86 aa8.37□□□□□ -1.07
NR4A1-221ENST00000565848 ERASQ7Z444 233 aa8.37□□□□□ -1.07
NR4A1-221ENST00000565848 UBE2DNLQ8IWF7 75 aa8.37□□□□□ -1.07
NR4A1-221ENST00000565848 Q8N976 141 aa8.37□□□□□ -1.07
NR4A1-221ENST00000565848 PACRGQ96M98 296 aaPredicted RBP8.37□□□□□ -1.07
NR4A1-221ENST00000565848 IGLV4-3A0A075B6K6 122 aa8.36□□□□□ -1.07
NR4A1-221ENST00000565848 UBE2L6O14933 153 aa8.36□□□□□ -1.07
NR4A1-221ENST00000565848 Q6ZR54 194 aa8.36□□□□□ -1.07
NR4A1-221ENST00000565848 FAM19A2Q8N3H0 131 aa8.36□□□□□ -1.07
NR4A1-221ENST00000565848 A0A087WX48 190 aa8.35□□□□□ -1.07
NR4A1-221ENST00000565848 C5orf52A6NGY3 159 aa8.35□□□□□ -1.07
NR4A1-221ENST00000565848 IBA57-AS1B1ANH7 110 aa8.35□□□□□ -1.07
NR4A1-221ENST00000565848 SMAGPQ0VAQ4 97 aa8.35□□□□□ -1.07
NR4A1-221ENST00000565848 LINC00173Q6ZV60 143 aa8.35□□□□□ -1.07
NR4A1-221ENST00000565848 AMELXQ99217 191 aa8.35□□□□□ -1.07
NR4A1-221ENST00000565848 KRTAP4-5Q9BYR2 181 aa8.35□□□□□ -1.07
NR4A1-221ENST00000565848 NBDYA0A0U1RRE5 68 aa8.34□□□□□ -1.07
NR4A1-221ENST00000565848 TMEM262E9PQX1 116 aa8.34□□□□□ -1.07
NR4A1-221ENST00000565848 IGHV3-30P01768 117 aa8.34□□□□□ -1.07
NR4A1-221ENST00000565848 IGHV3-33P01772 117 aa8.34□□□□□ -1.07
NR4A1-221ENST00000565848 IGHV3-30-3P0DP02 117 aa8.34□□□□□ -1.07
NR4A1-221ENST00000565848 IGHV3-30-5P0DP03 117 aa8.34□□□□□ -1.07
NR4A1-221ENST00000565848 ENHOQ6UWT2 76 aa8.34□□□□□ -1.07
NR4A1-221ENST00000565848 Q6ZUT4 128 aa8.34□□□□□ -1.07
NR4A1-221ENST00000565848 HIST3H2BBQ8N257 126 aa8.34□□□□□ -1.07
NR4A1-221ENST00000565848 ZNF664Q8N3J9 261 aa8.34□□□□□ -1.07
NR4A1-221ENST00000565848 TMEM141Q96I45 108 aa8.34□□□□□ -1.07
NR4A1-221ENST00000565848 OPRPNQ99935 248 aaPredicted RBP8.34□□□□□ -1.07
NR4A1-221ENST00000565848 DYNC1H1Q14204 4646 aaKnown RBP8.33□□□□□ -1.08
NR4A1-221ENST00000565848 IFITM10A6NMD0 228 aa8.33□□□□□ -1.08
NR4A1-221ENST00000565848 AMMECR1LQ6DCA0 310 aa8.33□□□□□ -1.08
NR4A1-221ENST00000565848 C10orf126Q8N4M7 172 aa8.33□□□□□ -1.08
NR4A1-221ENST00000565848 OR5A1Q8NGJ0 315 aa8.33□□□□□ -1.08
NR4A1-221ENST00000565848 SCGB3A1Q96QR1 104 aa8.33□□□□□ -1.08
NR4A1-221ENST00000565848 TTC32Q5I0X7 151 aa8.32□□□□□ -1.08
NR4A1-221ENST00000565848 FAM19A3Q7Z5A8 133 aa8.32□□□□□ -1.08
NR4A1-221ENST00000565848 BAALCQ8WXS3 180 aa8.32□□□□□ -1.08
NR4A1-221ENST00000565848 TMEM101Q96IK0 257 aa8.32□□□□□ -1.08
NR4A1-221ENST00000565848 KLK12Q9UKR0 248 aa8.32□□□□□ -1.08
NR4A1-221ENST00000565848 TRAV9-2A0A087WT02 112 aa8.31□□□□□ -1.08
NR4A1-221ENST00000565848 ATP5LO75964 103 aa8.31□□□□□ -1.08
NR4A1-221ENST00000565848 ANGP03950 147 aaKnown RBP8.31□□□□□ -1.08
NR4A1-221ENST00000565848 SNRPEP62304 92 aaKnown RBP8.31□□□□□ -1.08
NR4A1-221ENST00000565848 REG3AQ06141 175 aa8.31□□□□□ -1.08
NR4A1-221ENST00000565848 KRTAP26-1Q6PEX3 210 aa8.31□□□□□ -1.08
NR4A1-221ENST00000565848 LINC00269Q8N2A0 174 aa8.31□□□□□ -1.08
NR4A1-221ENST00000565848 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.3□□□□□ -1.08
NR4A1-221ENST00000565848 LEPROTL1O95214 131 aa8.3□□□□□ -1.08
NR4A1-221ENST00000565848 S100A6P06703 90 aa8.3□□□□□ -1.08
NR4A1-221ENST00000565848 DGAT2L7PQ6IED9 249 aa8.3□□□□□ -1.08
NR4A1-221ENST00000565848 IFI27L1Q96BM0 104 aa8.3□□□□□ -1.08
NR4A1-221ENST00000565848 LINC00959A0A1B0GUT2 108 aa8.29□□□□□ -1.08
NR4A1-221ENST00000565848 EREGO14944 169 aa8.29□□□□□ -1.08
NR4A1-221ENST00000565848 CCL25O15444 150 aa8.29□□□□□ -1.08
NR4A1-221ENST00000565848 MIAQ16674 131 aa8.29□□□□□ -1.08
NR4A1-221ENST00000565848 RNASE13Q5GAN3 156 aaKnown RBP8.29□□□□□ -1.08
NR4A1-221ENST00000565848 PAPPA-AS1Q5QFB9 102 aa8.29□□□□□ -1.08
NR4A1-221ENST00000565848 Q6ZRN7 208 aaPredicted RBP8.29□□□□□ -1.08
NR4A1-221ENST00000565848 HIST1H2BLQ99880 126 aa8.29□□□□□ -1.08
NR4A1-221ENST00000565848 DNAH2Q9P225 4427 aa8.29□□□□□ -1.08
NR4A1-221ENST00000565848 TRAV8-3A0A0A6YYJ7 113 aa8.28□□□□□ -1.08
NR4A1-221ENST00000565848 TRAV12-1A0A0B4J245 112 aa8.28□□□□□ -1.08
NR4A1-221ENST00000565848 TRAV8-4A0A0B4J246 113 aa8.28□□□□□ -1.08
NR4A1-221ENST00000565848 UBE2D1P51668 147 aa8.28□□□□□ -1.08
NR4A1-221ENST00000565848 PMVKQ15126 192 aa8.28□□□□□ -1.08
NR4A1-221ENST00000565848 ZC2HC1BQ5TFG8 222 aa8.28□□□□□ -1.08
NR4A1-221ENST00000565848 TEX43Q6ZNM6 134 aa8.28□□□□□ -1.08
NR4A1-221ENST00000565848 LINC00336Q6ZUF6 198 aa8.28□□□□□ -1.08
NR4A1-221ENST00000565848 SPATA12Q7Z6I5 190 aa8.28□□□□□ -1.08
NR4A1-221ENST00000565848 CST9LQ9H4G1 147 aa8.28□□□□□ -1.08
NR4A1-221ENST00000565848 HSPB8Q9UJY1 196 aa8.28□□□□□ -1.08
NR4A1-221ENST00000565848 Q6ZN92 141 aa8.27□□□□□ -1.09
NR4A1-221ENST00000565848 UBE2WQ96B02 151 aa8.27□□□□□ -1.09
NR4A1-221ENST00000565848 VCX2Q9H322 139 aa8.27□□□□□ -1.09
NR4A1-221ENST00000565848 IGLV4-69A0A075B6H9 119 aa8.26□□□□□ -1.09
NR4A1-221ENST00000565848 A0A1B0GVY2 172 aa8.26□□□□□ -1.09
NR4A1-221ENST00000565848 PRSS29PA6NIE9 313 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms