RNA–Protein interactions for RNA: ENST00000565626.1

NSMCE1-210, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 2

Gene NSMCE1, Length 259 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-210ENST00000565626 HIGD2BQ4VC39 106 aa7□□□□□ -1.29
NSMCE1-210ENST00000565626 CBLN2Q8IUK8 224 aa7□□□□□ -1.29
NSMCE1-210ENST00000565626 NUP35Q8NFH5 326 aa7□□□□□ -1.29
NSMCE1-210ENST00000565626 CHCHD10Q8WYQ3 142 aaPredicted RBP7□□□□□ -1.29
NSMCE1-210ENST00000565626 ISOC2Q96AB3 205 aa7□□□□□ -1.29
NSMCE1-210ENST00000565626 TMEM191AQ9H0A3 160 aa7□□□□□ -1.29
NSMCE1-210ENST00000565626 ST20Q9HBF5 79 aa7□□□□□ -1.29
NSMCE1-210ENST00000565626 ESDP10768 282 aa6.99□□□□□ -1.29
NSMCE1-210ENST00000565626 HNRNPA3P51991 378 aaKnown RBP6.99□□□□□ -1.29
NSMCE1-210ENST00000565626 RPL23P62829 140 aaKnown RBP6.99□□□□□ -1.29
NSMCE1-210ENST00000565626 TMEM241Q24JQ0 296 aa6.99□□□□□ -1.29
NSMCE1-210ENST00000565626 SMCO4Q9NRQ5 59 aa6.99□□□□□ -1.29
NSMCE1-210ENST00000565626 AP5S1Q9NUS5 200 aa6.99□□□□□ -1.29
NSMCE1-210ENST00000565626 C7orf77A4D0Y5 90 aa6.98□□□□□ -1.29
NSMCE1-210ENST00000565626 KRTAP29-1A8MX34 341 aaPredicted RBP6.98□□□□□ -1.29
NSMCE1-210ENST00000565626 H7C423 109 aa6.98□□□□□ -1.29
NSMCE1-210ENST00000565626 POLR2KP53803 58 aaKnown RBP6.98□□□□□ -1.29
NSMCE1-210ENST00000565626 RPL37AP61513 92 aaKnown RBP6.98□□□□□ -1.29
NSMCE1-210ENST00000565626 ADIRFQ15847 76 aa6.98□□□□□ -1.29
NSMCE1-210ENST00000565626 RPS10P5Q9NQ39 176 aa6.98□□□□□ -1.29
NSMCE1-210ENST00000565626 IGHV3-64A0A075B6Q5 118 aa6.97□□□□□ -1.29
NSMCE1-210ENST00000565626 XCL1P47992 114 aa6.97□□□□□ -1.29
NSMCE1-210ENST00000565626 FOXI1Q12951 378 aa6.97□□□□□ -1.29
NSMCE1-210ENST00000565626 RIGQ13278 110 aa6.97□□□□□ -1.29
NSMCE1-210ENST00000565626 NRACQ8N912 160 aa6.97□□□□□ -1.29
NSMCE1-210ENST00000565626 MRAP2Q96G30 205 aa6.97□□□□□ -1.29
NSMCE1-210ENST00000565626 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.96□□□□□ -1.3
NSMCE1-210ENST00000565626 TRBV27A0A0K0K1C4 114 aa6.96□□□□□ -1.3
NSMCE1-210ENST00000565626 LINC00959A0A1B0GUT2 108 aa6.96□□□□□ -1.3
NSMCE1-210ENST00000565626 LOC105371267A0A1B0GV96 52 aa6.96□□□□□ -1.3
NSMCE1-210ENST00000565626 ZNF25P17030 456 aaPredicted RBP6.96□□□□□ -1.3
NSMCE1-210ENST00000565626 PNRC1Q12796 327 aaPredicted RBP6.96□□□□□ -1.3
NSMCE1-210ENST00000565626 CIRBPQ14011 172 aaKnown RBP6.96□□□□□ -1.3
NSMCE1-210ENST00000565626 OR5A1Q8NGJ0 315 aa6.96□□□□□ -1.3
NSMCE1-210ENST00000565626 LINC00526Q96FQ7 95 aa6.96□□□□□ -1.3
NSMCE1-210ENST00000565626 BTF3L4Q96K17 158 aa6.96□□□□□ -1.3
NSMCE1-210ENST00000565626 NAT8Q9UHE5 227 aa6.96□□□□□ -1.3
NSMCE1-210ENST00000565626 NAT8BQ9UHF3 227 aa6.96□□□□□ -1.3
NSMCE1-210ENST00000565626 HMCN2Q8NDA2 5059 aa6.95□□□□□ -1.3
NSMCE1-210ENST00000565626 A0A087WYN8 130 aa6.95□□□□□ -1.3
NSMCE1-210ENST00000565626 COLCA2A8K830 154 aa6.95□□□□□ -1.3
NSMCE1-210ENST00000565626 CCL25O15444 150 aa6.95□□□□□ -1.3
NSMCE1-210ENST00000565626 CAMPP49913 170 aa6.95□□□□□ -1.3
NSMCE1-210ENST00000565626 COX6A2Q02221 97 aa6.95□□□□□ -1.3
NSMCE1-210ENST00000565626 MRPL51Q4U2R6 128 aaKnown RBP6.95□□□□□ -1.3
NSMCE1-210ENST00000565626 CFAP161Q6P656 301 aa6.95□□□□□ -1.3
NSMCE1-210ENST00000565626 PRSS3P2Q8NHM4 247 aa6.95□□□□□ -1.3
NSMCE1-210ENST00000565626 SPACA4Q8TDM5 124 aa6.95□□□□□ -1.3
NSMCE1-210ENST00000565626 DPH3Q96FX2 82 aa6.95□□□□□ -1.3
NSMCE1-210ENST00000565626 TMEM101Q96IK0 257 aa6.95□□□□□ -1.3
NSMCE1-210ENST00000565626 CDC42SE2Q9NRR3 84 aa6.95□□□□□ -1.3
NSMCE1-210ENST00000565626 GVQW2A0A096LPI5 108 aaPredicted RBP6.94□□□□□ -1.3
NSMCE1-210ENST00000565626 SMIM27A0A1W2PRY6 76 aa6.94□□□□□ -1.3
NSMCE1-210ENST00000565626 VCYO14598 125 aa6.94□□□□□ -1.3
NSMCE1-210ENST00000565626 RNASE13Q5GAN3 156 aaKnown RBP6.94□□□□□ -1.3
NSMCE1-210ENST00000565626 FAM104BQ5XKR9 115 aa6.94□□□□□ -1.3
NSMCE1-210ENST00000565626 MRPL52Q86TS9 123 aaKnown RBP6.94□□□□□ -1.3
NSMCE1-210ENST00000565626 IGKV2-24A0A0C4DH68 120 aa6.93□□□□□ -1.3
NSMCE1-210ENST00000565626 MT-ND4LP03901 98 aa6.93□□□□□ -1.3
NSMCE1-210ENST00000565626 FCER1GP30273 86 aa6.93□□□□□ -1.3
NSMCE1-210ENST00000565626 SUMO2P61956 95 aaKnown RBP6.93□□□□□ -1.3
NSMCE1-210ENST00000565626 MRPL54Q6P161 138 aaKnown RBP6.93□□□□□ -1.3
NSMCE1-210ENST00000565626 ZNF664Q8N3J9 261 aa6.93□□□□□ -1.3
NSMCE1-210ENST00000565626 YPEL4Q96NS1 127 aa6.93□□□□□ -1.3
NSMCE1-210ENST00000565626 SS18Q15532 418 aa6.91□□□□□ -1.3
NSMCE1-210ENST00000565626 MAJINQ3KP22 176 aa6.91□□□□□ -1.3
NSMCE1-210ENST00000565626 CD164L2Q6UWJ8 174 aa6.91□□□□□ -1.3
NSMCE1-210ENST00000565626 CTDSP1Q9GZU7 261 aa6.91□□□□□ -1.3
NSMCE1-210ENST00000565626 PLAC8Q9NZF1 115 aa6.91□□□□□ -1.3
NSMCE1-210ENST00000565626 UBE2D4Q9Y2X8 147 aa6.91□□□□□ -1.3
NSMCE1-210ENST00000565626 TNXBP22105 4242 aa6.9□□□□□ -1.3
NSMCE1-210ENST00000565626 A0A096LNI7 61 aa6.9□□□□□ -1.3
NSMCE1-210ENST00000565626 IGHV1-58A0A0C4DH39 117 aa6.9□□□□□ -1.3
NSMCE1-210ENST00000565626 PHOX2AO14813 284 aa6.9□□□□□ -1.3
NSMCE1-210ENST00000565626 PPP1R17O96001 155 aa6.9□□□□□ -1.3
NSMCE1-210ENST00000565626 OXTP01178 125 aa6.9□□□□□ -1.3
NSMCE1-210ENST00000565626 RAB5AP20339 215 aa6.9□□□□□ -1.3
NSMCE1-210ENST00000565626 CKS2P33552 79 aa6.9□□□□□ -1.3
NSMCE1-210ENST00000565626 Q6ZUT4 128 aa6.9□□□□□ -1.3
NSMCE1-210ENST00000565626 KIR2DL4Q99706 377 aa6.9□□□□□ -1.3
NSMCE1-210ENST00000565626 TRBV24-1A0A075B6N3 115 aa6.89□□□□□ -1.31
NSMCE1-210ENST00000565626 TRAV13-1A0A0B4J241 112 aa6.89□□□□□ -1.31
NSMCE1-210ENST00000565626 A0A1B0GXF2 115 aa6.89□□□□□ -1.31
NSMCE1-210ENST00000565626 D6R8Y8 96 aa6.89□□□□□ -1.31
NSMCE1-210ENST00000565626 PPP1R2P9O14990 202 aa6.89□□□□□ -1.31
NSMCE1-210ENST00000565626 TNFRSF6BO95407 300 aa6.89□□□□□ -1.31
NSMCE1-210ENST00000565626 NPYP01303 97 aa6.89□□□□□ -1.31
NSMCE1-210ENST00000565626 RAB5BP61020 215 aa6.89□□□□□ -1.31
NSMCE1-210ENST00000565626 RPL39P62891 51 aaKnown RBP6.89□□□□□ -1.31
NSMCE1-210ENST00000565626 STPG4Q8N801 248 aa6.89□□□□□ -1.31
NSMCE1-210ENST00000565626 C20orf78Q9BR46 151 aa6.89□□□□□ -1.31
NSMCE1-210ENST00000565626 A0A1B0GW15 77 aa6.88□□□□□ -1.31
NSMCE1-210ENST00000565626 C1orf196B1AJZ1 125 aa6.88□□□□□ -1.31
NSMCE1-210ENST00000565626 HBBP68871 147 aa6.88□□□□□ -1.31
NSMCE1-210ENST00000565626 FAM104AQ969W3 186 aa6.88□□□□□ -1.31
NSMCE1-210ENST00000565626 ANAPC16Q96DE5 110 aa6.88□□□□□ -1.31
NSMCE1-210ENST00000565626 CARD19Q96LW7 228 aa6.88□□□□□ -1.31
NSMCE1-210ENST00000565626 OPRPNQ99935 248 aaPredicted RBP6.88□□□□□ -1.31
NSMCE1-210ENST00000565626 CSDC2Q9Y534 153 aaKnown RBP6.88□□□□□ -1.31
NSMCE1-210ENST00000565626 IGLV4-69A0A075B6H9 119 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms