RNA–Protein interactions for RNA: ENST00000565274.5

CAPN3-214, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-214ENST00000565274 UBE2D3P61077 147 aa3.73□□□□□ -1.81
CAPN3-214ENST00000565274 UBE2D2P62837 147 aa3.73□□□□□ -1.81
CAPN3-214ENST00000565274 ZFP2Q6ZN57 461 aa3.73□□□□□ -1.81
CAPN3-214ENST00000565274 Q6ZSV7 163 aa3.73□□□□□ -1.81
CAPN3-214ENST00000565274 FAM223AQ8IWN6 122 aa3.73□□□□□ -1.81
CAPN3-214ENST00000565274 ITLN2Q8WWU7 325 aaPredicted RBP3.73□□□□□ -1.81
CAPN3-214ENST00000565274 CHCHD10Q8WYQ3 142 aaPredicted RBP3.73□□□□□ -1.81
CAPN3-214ENST00000565274 VSIG2Q96IQ7 327 aa3.73□□□□□ -1.81
CAPN3-214ENST00000565274 TPRP12270 2363 aaKnown RBP3.73□□□□□ -1.81
CAPN3-214ENST00000565274 LOC400499M0QZD8 3231 aa3.72□□□□□ -1.81
CAPN3-214ENST00000565274 PRAC2D3DTV9 90 aa3.72□□□□□ -1.81
CAPN3-214ENST00000565274 PPP1R17O96001 155 aa3.72□□□□□ -1.81
CAPN3-214ENST00000565274 SCGB1C2P0DMR2 95 aa3.72□□□□□ -1.81
CAPN3-214ENST00000565274 COX6B1P14854 86 aa3.72□□□□□ -1.81
CAPN3-214ENST00000565274 HERVK_113P61574 105 aa3.72□□□□□ -1.81
CAPN3-214ENST00000565274 KIAA0087Q14695 138 aa3.72□□□□□ -1.81
CAPN3-214ENST00000565274 C15orf32Q32M92 178 aa3.72□□□□□ -1.81
CAPN3-214ENST00000565274 LINC00242Q5T6M2 205 aa3.72□□□□□ -1.81
CAPN3-214ENST00000565274 GPHB5Q86YW7 130 aa3.72□□□□□ -1.81
CAPN3-214ENST00000565274 ZNF843Q8N446 348 aa3.72□□□□□ -1.81
CAPN3-214ENST00000565274 C5orf56Q8N8D9 126 aa3.72□□□□□ -1.81
CAPN3-214ENST00000565274 XCL2Q9UBD3 114 aa3.72□□□□□ -1.81
CAPN3-214ENST00000565274 S4R3C0 116 aa3.72□□□□□ -1.81
CAPN3-214ENST00000565274 ABCA4P78363 2273 aa3.72□□□□□ -1.81
CAPN3-214ENST00000565274 SPTA1P02549 2419 aa3.71□□□□□ -1.82
CAPN3-214ENST00000565274 IGHV6-1A0A0B4J1U7 121 aa3.71□□□□□ -1.82
CAPN3-214ENST00000565274 IGHV1-69DA0A0B4J2H0 117 aa3.71□□□□□ -1.82
CAPN3-214ENST00000565274 ZNF815PA8K554 130 aa3.71□□□□□ -1.82
CAPN3-214ENST00000565274 IBA57-AS1B1ANH7 110 aa3.71□□□□□ -1.82
CAPN3-214ENST00000565274 NDUFA4O00483 81 aa3.71□□□□□ -1.82
CAPN3-214ENST00000565274 SOCS3O14543 225 aa3.71□□□□□ -1.82
CAPN3-214ENST00000565274 ATP6V0E1O15342 81 aa3.71□□□□□ -1.82
CAPN3-214ENST00000565274 NXPH4O95158 308 aa3.71□□□□□ -1.82
CAPN3-214ENST00000565274 ATP5EP56381 51 aaPredicted RBP3.71□□□□□ -1.82
CAPN3-214ENST00000565274 PRB3Q04118 309 aaPredicted RBP3.71□□□□□ -1.82
CAPN3-214ENST00000565274 SPANXN1Q5VSR9 72 aa3.71□□□□□ -1.82
CAPN3-214ENST00000565274 USMG5Q96IX5 58 aa3.71□□□□□ -1.82
CAPN3-214ENST00000565274 FAM218AQ96MZ4 157 aa3.71□□□□□ -1.82
CAPN3-214ENST00000565274 SCGB3A1Q96QR1 104 aa3.71□□□□□ -1.82
CAPN3-214ENST00000565274 OPRPNQ99935 248 aaPredicted RBP3.71□□□□□ -1.82
CAPN3-214ENST00000565274 ZFHX4Q86UP3 3567 aa3.71□□□□□ -1.82
CAPN3-214ENST00000565274 WNK2Q9Y3S1 2297 aa3.7□□□□□ -1.82
CAPN3-214ENST00000565274 CFAP47Q6ZTR5 3102 aa3.7□□□□□ -1.82
CAPN3-214ENST00000565274 IGHV4OR15-8A0A075B7B6 117 aa3.7□□□□□ -1.82
CAPN3-214ENST00000565274 A0A087WW49 117 aa3.7□□□□□ -1.82
CAPN3-214ENST00000565274 A0A1W2PPR1 153 aa3.7□□□□□ -1.82
CAPN3-214ENST00000565274 LY6HO94772 140 aa3.7□□□□□ -1.82
CAPN3-214ENST00000565274 IGHV3-23P01764 117 aa3.7□□□□□ -1.82
CAPN3-214ENST00000565274 CCKP06307 115 aa3.7□□□□□ -1.82
CAPN3-214ENST00000565274 RNASE4P34096 147 aaKnown RBP3.7□□□□□ -1.82
CAPN3-214ENST00000565274 ZNF876PQ49A33 203 aa3.7□□□□□ -1.82
CAPN3-214ENST00000565274 DEFB121Q5J5C9 76 aa3.7□□□□□ -1.82
CAPN3-214ENST00000565274 C7orf65Q6ZTY9 151 aa3.7□□□□□ -1.82
CAPN3-214ENST00000565274 DIRC1Q969H9 104 aa3.7□□□□□ -1.82
CAPN3-214ENST00000565274 LINC00474Q9P2X8 69 aa3.7□□□□□ -1.82
CAPN3-214ENST00000565274 LAMA5O15230 3695 aa3.69□□□□□ -1.82
CAPN3-214ENST00000565274 SPTBN4Q9H254 2564 aa3.69□□□□□ -1.82
CAPN3-214ENST00000565274 AKAP13Q12802 2813 aa3.69□□□□□ -1.82
CAPN3-214ENST00000565274 CEP295Q9C0D2 2601 aa3.69□□□□□ -1.82
CAPN3-214ENST00000565274 TRAV21A0A0B4J279 112 aa3.69□□□□□ -1.82
CAPN3-214ENST00000565274 A0A0J9YY99 117 aa3.69□□□□□ -1.82
CAPN3-214ENST00000565274 H3BVH4 76 aa3.69□□□□□ -1.82
CAPN3-214ENST00000565274 CDK2AP2O75956 126 aa3.69□□□□□ -1.82
CAPN3-214ENST00000565274 IGHV1-69P01742 117 aa3.69□□□□□ -1.82
CAPN3-214ENST00000565274 UBE2BP63146 152 aa3.69□□□□□ -1.82
CAPN3-214ENST00000565274 TMEM170BQ5T4T1 132 aa3.69□□□□□ -1.82
CAPN3-214ENST00000565274 C2orf66Q6UXQ4 117 aa3.69□□□□□ -1.82
CAPN3-214ENST00000565274 SDIM1Q6ZPB5 146 aa3.69□□□□□ -1.82
CAPN3-214ENST00000565274 NDUFA11Q86Y39 141 aa3.69□□□□□ -1.82
CAPN3-214ENST00000565274 ZFAND2AQ8N6M9 145 aa3.69□□□□□ -1.82
CAPN3-214ENST00000565274 NKAPP1Q8N9T2 125 aa3.69□□□□□ -1.82
CAPN3-214ENST00000565274 DMXL2Q8TDJ6 3036 aa3.69□□□□□ -1.82
CAPN3-214ENST00000565274 CACNA1AO00555 2505 aa3.69□□□□□ -1.82
CAPN3-214ENST00000565274 PIEZO2Q9H5I5 2752 aa3.68□□□□□ -1.82
CAPN3-214ENST00000565274 MGAQ8IWI9 3026 aa3.68□□□□□ -1.82
CAPN3-214ENST00000565274 NCOR2Q9Y618 2525 aa3.68□□□□□ -1.82
CAPN3-214ENST00000565274 IGLV4-69A0A075B6H9 119 aa3.68□□□□□ -1.82
CAPN3-214ENST00000565274 LOC107984156A0A0G2JMH3 177 aa3.68□□□□□ -1.82
CAPN3-214ENST00000565274 TRBV6-5A0A0K0K1A5 114 aa3.68□□□□□ -1.82
CAPN3-214ENST00000565274 A6NDX4 124 aa3.68□□□□□ -1.82
CAPN3-214ENST00000565274 DNAJC9-AS1A6NH13 148 aa3.68□□□□□ -1.82
CAPN3-214ENST00000565274 C11orf86A6NJI1 115 aa3.68□□□□□ -1.82
CAPN3-214ENST00000565274 LINC01548A6NM66 108 aa3.68□□□□□ -1.82
CAPN3-214ENST00000565274 A6NN06 94 aa3.68□□□□□ -1.82
CAPN3-214ENST00000565274 G3V318 75 aa3.68□□□□□ -1.82
CAPN3-214ENST00000565274 SYNJ2BPP57105 145 aa3.68□□□□□ -1.82
CAPN3-214ENST00000565274 LINC01554Q52M75 96 aa3.68□□□□□ -1.82
CAPN3-214ENST00000565274 PRR9Q5T870 116 aa3.68□□□□□ -1.82
CAPN3-214ENST00000565274 LYPD5Q6UWN5 251 aa3.68□□□□□ -1.82
CAPN3-214ENST00000565274 LINC00643Q86TS7 51 aa3.68□□□□□ -1.82
CAPN3-214ENST00000565274 ARL17AQ8IVW1 177 aa3.68□□□□□ -1.82
CAPN3-214ENST00000565274 TMEM141Q96I45 108 aa3.68□□□□□ -1.82
CAPN3-214ENST00000565274 TMEM243Q9BU79 118 aa3.68□□□□□ -1.82
CAPN3-214ENST00000565274 ZNF702PQ9H963 129 aa3.68□□□□□ -1.82
CAPN3-214ENST00000565274 ZNF706Q9Y5V0 76 aaPredicted RBP3.68□□□□□ -1.82
CAPN3-214ENST00000565274 KIF25-AS1Q9Y6Z4 181 aa3.68□□□□□ -1.82
CAPN3-214ENST00000565274 CACNA1BQ00975 2339 aa3.67□□□□□ -1.82
CAPN3-214ENST00000565274 A0A0B4J2C4 111 aa3.67□□□□□ -1.82
CAPN3-214ENST00000565274 IGHV3-30P01768 117 aa3.67□□□□□ -1.82
CAPN3-214ENST00000565274 ACYP1P07311 99 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms