RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 TIMM21Q9BVV7 248 aa10.61□□□□□ -0.71
RAB40C-208ENST00000564703 CDC42SE2Q9NRR3 84 aa10.61□□□□□ -0.71
RAB40C-208ENST00000564703 C16orf90A8MZG2 172 aa10.6□□□□□ -0.71
RAB40C-208ENST00000564703 IFI27P40305 119 aaPredicted RBP10.6□□□□□ -0.71
RAB40C-208ENST00000564703 MAPKAPK5-AS1Q8N8E1 139 aa10.6□□□□□ -0.71
RAB40C-208ENST00000564703 ALKBH7Q9BT30 221 aaPredicted RBP10.6□□□□□ -0.71
RAB40C-208ENST00000564703 UBE2D4Q9Y2X8 147 aa10.6□□□□□ -0.71
RAB40C-208ENST00000564703 LECT2O14960 151 aa10.59□□□□□ -0.71
RAB40C-208ENST00000564703 SS18Q15532 418 aa10.59□□□□□ -0.71
RAB40C-208ENST00000564703 C14orf177Q52M58 125 aa10.59□□□□□ -0.71
RAB40C-208ENST00000564703 DNAH10Q8IVF4 4471 aa10.58□□□□□ -0.72
RAB40C-208ENST00000564703 RPL39P62891 51 aaKnown RBP10.58□□□□□ -0.72
RAB40C-208ENST00000564703 CDPF1Q6NVV7 123 aa10.58□□□□□ -0.72
RAB40C-208ENST00000564703 CBLN2Q8IUK8 224 aa10.58□□□□□ -0.72
RAB40C-208ENST00000564703 Q8N814 137 aa10.58□□□□□ -0.72
RAB40C-208ENST00000564703 SPANXA1Q9NS26 97 aa10.58□□□□□ -0.72
RAB40C-208ENST00000564703 KRTAP10-2P60368 255 aa10.57□□□□□ -0.72
RAB40C-208ENST00000564703 NTN5Q8WTR8 489 aaPredicted RBP10.57□□□□□ -0.72
RAB40C-208ENST00000564703 CYSLTR1Q9Y271 337 aa10.57□□□□□ -0.72
RAB40C-208ENST00000564703 LINC00959A0A1B0GUT2 108 aa10.56□□□□□ -0.72
RAB40C-208ENST00000564703 GAGE12HA6NDE8 117 aa10.56□□□□□ -0.72
RAB40C-208ENST00000564703 CCL25O15444 150 aa10.56□□□□□ -0.72
RAB40C-208ENST00000564703 FA2HQ7L5A8 372 aa10.56□□□□□ -0.72
RAB40C-208ENST00000564703 CHCHD10Q8WYQ3 142 aaPredicted RBP10.56□□□□□ -0.72
RAB40C-208ENST00000564703 IGLV5-52A0A0A0MRZ9 124 aa10.55□□□□□ -0.72
RAB40C-208ENST00000564703 C1orf196B1AJZ1 125 aa10.55□□□□□ -0.72
RAB40C-208ENST00000564703 CFAP161Q6P656 301 aa10.55□□□□□ -0.72
RAB40C-208ENST00000564703 C2orf66Q6UXQ4 117 aa10.55□□□□□ -0.72
RAB40C-208ENST00000564703 YPEL4Q96NS1 127 aa10.55□□□□□ -0.72
RAB40C-208ENST00000564703 USP17L23D6RBM5 183 aa10.54□□□□□ -0.72
RAB40C-208ENST00000564703 WFDC2Q14508 124 aa10.54□□□□□ -0.72
RAB40C-208ENST00000564703 KRTAP26-1Q6PEX3 210 aa10.54□□□□□ -0.72
RAB40C-208ENST00000564703 PYGO1Q9Y3Y4 419 aa10.54□□□□□ -0.72
RAB40C-208ENST00000564703 DNAH2Q9P225 4427 aa10.53□□□□□ -0.72
RAB40C-208ENST00000564703 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.53□□□□□ -0.72
RAB40C-208ENST00000564703 TRAV13-1A0A0B4J241 112 aa10.53□□□□□ -0.72
RAB40C-208ENST00000564703 XCL1P47992 114 aa10.53□□□□□ -0.72
RAB40C-208ENST00000564703 MRPS36P82909 103 aaKnown RBP10.53□□□□□ -0.72
RAB40C-208ENST00000564703 RNASE13Q5GAN3 156 aaKnown RBP10.53□□□□□ -0.72
RAB40C-208ENST00000564703 LINC01549A6NIU2 74 aa10.52□□□□□ -0.73
RAB40C-208ENST00000564703 GCSHP23434 173 aa10.52□□□□□ -0.73
RAB40C-208ENST00000564703 FUSP35637 526 aaKnown RBP eCLIP10.52□□□□□ -0.731e-5■■■□□ 17
RAB40C-208ENST00000564703 Q6ZN92 141 aa10.52□□□□□ -0.73
RAB40C-208ENST00000564703 Q6ZUT4 128 aa10.52□□□□□ -0.73
RAB40C-208ENST00000564703 OPRPNQ99935 248 aaPredicted RBP10.52□□□□□ -0.73
RAB40C-208ENST00000564703 DNAH17Q9UFH2 4485 aa10.52□□□□□ -0.73
RAB40C-208ENST00000564703 EPPK1P58107 5090 aaKnown RBP10.52□□□□□ -0.73
RAB40C-208ENST00000564703 RAB5BP61020 215 aa10.51□□□□□ -0.73
RAB40C-208ENST00000564703 PAPPA-AS1Q5QFB9 102 aa10.51□□□□□ -0.73
RAB40C-208ENST00000564703 CD164L2Q6UWJ8 174 aa10.51□□□□□ -0.73
RAB40C-208ENST00000564703 TMEM141Q96I45 108 aa10.51□□□□□ -0.73
RAB40C-208ENST00000564703 VCX2Q9H322 139 aa10.51□□□□□ -0.73
RAB40C-208ENST00000564703 FRAS1Q86XX4 4008 aa10.51□□□□□ -0.73
RAB40C-208ENST00000564703 LINC00614P0C842 121 aa10.5□□□□□ -0.73
RAB40C-208ENST00000564703 TEX43Q6ZNM6 134 aa10.5□□□□□ -0.73
RAB40C-208ENST00000564703 C18orf32Q8TCD1 76 aa10.5□□□□□ -0.73
RAB40C-208ENST00000564703 AP5S1Q9NUS5 200 aa10.5□□□□□ -0.73
RAB40C-208ENST00000564703 hDV102S1A0JD36 115 aa10.49□□□□□ -0.73
RAB40C-208ENST00000564703 LINC01546A6NGU7 62 aa10.49□□□□□ -0.73
RAB40C-208ENST00000564703 IFITM10A6NMD0 228 aa10.49□□□□□ -0.73
RAB40C-208ENST00000564703 ATP6V1G1O75348 118 aa10.49□□□□□ -0.73
RAB40C-208ENST00000564703 NPSP0C0P6 89 aa10.49□□□□□ -0.73
RAB40C-208ENST00000564703 S100A1P23297 94 aa10.49□□□□□ -0.73
RAB40C-208ENST00000564703 TOMM6Q96B49 74 aa10.49□□□□□ -0.73
RAB40C-208ENST00000564703 SCGB3A1Q96QR1 104 aa10.49□□□□□ -0.73
RAB40C-208ENST00000564703 C2orf88Q9BSF0 95 aa10.49□□□□□ -0.73
RAB40C-208ENST00000564703 IGLV4-3A0A075B6K6 122 aa10.48□□□□□ -0.73
RAB40C-208ENST00000564703 MALP21145 153 aa10.48□□□□□ -0.73
RAB40C-208ENST00000564703 FOXI1Q12951 378 aa10.48□□□□□ -0.73
RAB40C-208ENST00000564703 PRSS1P07477 247 aa10.47□□□□□ -0.73
RAB40C-208ENST00000564703 ERASQ7Z444 233 aa10.47□□□□□ -0.73
RAB40C-208ENST00000564703 IGIPA6NJ69 53 aa10.46□□□□□ -0.73
RAB40C-208ENST00000564703 COLCA2A8K830 154 aa10.46□□□□□ -0.73
RAB40C-208ENST00000564703 COX7A2LO14548 114 aa10.46□□□□□ -0.73
RAB40C-208ENST00000564703 TRGC2P03986 189 aa10.46□□□□□ -0.73
RAB40C-208ENST00000564703 FAM104AQ969W3 186 aa10.46□□□□□ -0.73
RAB40C-208ENST00000564703 TIMM17AQ99595 171 aa10.46□□□□□ -0.73
RAB40C-208ENST00000564703 IGHV1-58A0A0C4DH39 117 aa10.45□□□□□ -0.74
RAB40C-208ENST00000564703 FAT2Q9NYQ8 4349 aa10.45□□□□□ -0.74
RAB40C-208ENST00000564703 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.44□□□□□ -0.74
RAB40C-208ENST00000564703 APOMO95445 188 aa10.44□□□□□ -0.74
RAB40C-208ENST00000564703 ZNF561-AS1K7EIQ3 104 aa10.43□□□□□ -0.74
RAB40C-208ENST00000564703 SCO1O75880 301 aa10.43□□□□□ -0.74
RAB40C-208ENST00000564703 HIGD2BQ4VC39 106 aa10.43□□□□□ -0.74
RAB40C-208ENST00000564703 C5orf38Q86SI9 138 aa10.43□□□□□ -0.74
RAB40C-208ENST00000564703 BAGE3Q86Y29 109 aa10.43□□□□□ -0.74
RAB40C-208ENST00000564703 AMELXQ99217 191 aa10.43□□□□□ -0.74
RAB40C-208ENST00000564703 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.42□□□□□ -0.74
RAB40C-208ENST00000564703 KRTAP10-1P60331 282 aa10.42□□□□□ -0.74
RAB40C-208ENST00000564703 SEC11AP67812 179 aa10.42□□□□□ -0.74
RAB40C-208ENST00000564703 CHCHD1Q96BP2 118 aaKnown RBP10.42□□□□□ -0.74
RAB40C-208ENST00000564703 PKD1P98161 4303 aa10.42□□□□□ -0.74
RAB40C-208ENST00000564703 HBDP02042 147 aa10.41□□□□□ -0.74
RAB40C-208ENST00000564703 C15orf56Q8N910 161 aa10.41□□□□□ -0.74
RAB40C-208ENST00000564703 URB1-AS1Q96HZ7 61 aa10.41□□□□□ -0.74
RAB40C-208ENST00000564703 GVQW2A0A096LPI5 108 aaPredicted RBP10.4□□□□□ -0.74
RAB40C-208ENST00000564703 CDK2AP2O75956 126 aa10.4□□□□□ -0.74
RAB40C-208ENST00000564703 UBE2D1P51668 147 aa10.4□□□□□ -0.74
RAB40C-208ENST00000564703 LINC00242Q5T6M2 205 aa10.4□□□□□ -0.74
RAB40C-208ENST00000564703 ZC2HC1BQ5TFG8 222 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms