RNA–Protein interactions for RNA: ENST00000564333.1

CCNF-204, Transcript of cyclin F, humanhuman

Gene CCNF, Length 1,937 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-204ENST00000564333 TMEM263Q8WUH6 116 aaKnown RBP11.92□□□□□ -0.5
CCNF-204ENST00000564333 FAM110AQ9BQ89 295 aa11.92□□□□□ -0.5
CCNF-204ENST00000564333 MAST4O15021 2626 aa11.92□□□□□ -0.5
CCNF-204ENST00000564333 LY6G6DO95868 133 aa11.92□□□□□ -0.5
CCNF-204ENST00000564333 SMCPP49901 116 aaPredicted RBP11.92□□□□□ -0.5
CCNF-204ENST00000564333 CHCHD7Q9BUK0 85 aa11.92□□□□□ -0.5
CCNF-204ENST00000564333 SCGB1C2P0DMR2 95 aa11.91□□□□□ -0.5
CCNF-204ENST00000564333 MTURNQ8N3F0 131 aa11.91□□□□□ -0.5
CCNF-204ENST00000564333 C19orf73Q9NVV2 129 aa11.91□□□□□ -0.5
CCNF-204ENST00000564333 ZNF22P17026 224 aaPredicted RBP11.9□□□□□ -0.5
CCNF-204ENST00000564333 NF1P21359 2839 aa11.9□□□□□ -0.5
CCNF-204ENST00000564333 IGHV3-38A0A0C4DH36 116 aa11.9□□□□□ -0.51
CCNF-204ENST00000564333 GIG44P09565 113 aaPredicted RBP11.9□□□□□ -0.51
CCNF-204ENST00000564333 A0A0J9YXV3 536 aa11.89□□□□□ -0.51
CCNF-204ENST00000564333 TCL1BO95988 128 aa11.89□□□□□ -0.51
CCNF-204ENST00000564333 RPL35AP18077 110 aaKnown RBP11.89□□□□□ -0.51
CCNF-204ENST00000564333 KRTAP10-3P60369 221 aa11.89□□□□□ -0.51
CCNF-204ENST00000564333 FAM104AQ969W3 186 aa11.89□□□□□ -0.51
CCNF-204ENST00000564333 SPANXA1Q9NS26 97 aa11.89□□□□□ -0.51
CCNF-204ENST00000564333 ERG28Q9UKR5 140 aa11.89□□□□□ -0.51
CCNF-204ENST00000564333 TMEM262E9PQX1 116 aa11.88□□□□□ -0.51
CCNF-204ENST00000564333 INSL3P51460 131 aa11.88□□□□□ -0.51
CCNF-204ENST00000564333 CEMP1Q6PRD7 247 aaPredicted RBP11.88□□□□□ -0.51
CCNF-204ENST00000564333 Q6ZTI0 123 aa11.88□□□□□ -0.51
CCNF-204ENST00000564333 UBE2D4Q9Y2X8 147 aa11.88□□□□□ -0.51
CCNF-204ENST00000564333 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.88□□□□□ -0.51
CCNF-204ENST00000564333 IGKV2-29A2NJV5 120 aaPredicted RBP11.88□□□□□ -0.51
CCNF-204ENST00000564333 A4D1N5 150 aa11.87□□□□□ -0.51
CCNF-204ENST00000564333 PF4P02776 101 aa11.87□□□□□ -0.51
CCNF-204ENST00000564333 MRPS36P82909 103 aaKnown RBP11.87□□□□□ -0.51
CCNF-204ENST00000564333 C16orf74Q96GX8 76 aa11.87□□□□□ -0.51
CCNF-204ENST00000564333 TRAV4A0A0B4J268 109 aa11.86□□□□□ -0.51
CCNF-204ENST00000564333 K7EQD1 137 aa11.86□□□□□ -0.51
CCNF-204ENST00000564333 IGHV3-33P01772 117 aa11.86□□□□□ -0.51
CCNF-204ENST00000564333 RNASE13Q5GAN3 156 aaKnown RBP11.86□□□□□ -0.51
CCNF-204ENST00000564333 TIMM21Q9BVV7 248 aa11.86□□□□□ -0.51
CCNF-204ENST00000564333 NOP10Q9NPE3 64 aaKnown RBP11.86□□□□□ -0.51
CCNF-204ENST00000564333 Q6ZUT4 128 aa11.85□□□□□ -0.51
CCNF-204ENST00000564333 MTORP42345 2549 aa11.85□□□□□ -0.51
CCNF-204ENST00000564333 IGHV3-64A0A075B6Q5 118 aa11.84□□□□□ -0.51
CCNF-204ENST00000564333 DAZ2Q13117 558 aaKnown RBP11.84□□□□□ -0.51
CCNF-204ENST00000564333 SFTA2Q6UW10 78 aa11.84□□□□□ -0.51
CCNF-204ENST00000564333 CDIP1Q9H305 208 aa11.84□□□□□ -0.51
CCNF-204ENST00000564333 TRBV10-1A0A0K0K1A3 114 aa11.84□□□□□ -0.51
CCNF-204ENST00000564333 PLAC8L1A1L4L8 177 aa11.84□□□□□ -0.51
CCNF-204ENST00000564333 ATXN8Q156A1 80 aa11.84□□□□□ -0.51
CCNF-204ENST00000564333 MUSTN1Q8IVN3 82 aa11.84□□□□□ -0.51
CCNF-204ENST00000564333 LINC00482Q8N8I6 264 aa11.84□□□□□ -0.51
CCNF-204ENST00000564333 RNF183Q96D59 192 aa11.84□□□□□ -0.51
CCNF-204ENST00000564333 LINC01600Q96MT4 127 aa11.84□□□□□ -0.51
CCNF-204ENST00000564333 A0A0J9YXY3 114 aa11.83□□□□□ -0.52
CCNF-204ENST00000564333 RPL36AP83881 106 aaKnown RBP11.83□□□□□ -0.52
CCNF-204ENST00000564333 CSNK1G2-AS1Q8NCQ2 148 aa11.83□□□□□ -0.52
CCNF-204ENST00000564333 RPL36ALQ969Q0 106 aaKnown RBP11.83□□□□□ -0.52
CCNF-204ENST00000564333 IGHV1-58A0A0C4DH39 117 aa11.82□□□□□ -0.52
CCNF-204ENST00000564333 TINCRA0A1B0GVN0 87 aa11.82□□□□□ -0.52
CCNF-204ENST00000564333 INAFM1C9JVW0 142 aa11.82□□□□□ -0.52
CCNF-204ENST00000564333 SLC25A20O43772 301 aa11.82□□□□□ -0.52
CCNF-204ENST00000564333 IGHV3-30-3P0DP02 117 aa11.82□□□□□ -0.52
CCNF-204ENST00000564333 HIVEP1P15822 2718 aa11.82□□□□□ -0.52
CCNF-204ENST00000564333 SPANXDQ9BXN6 97 aa11.82□□□□□ -0.52
CCNF-204ENST00000564333 SPANXCQ9NY87 97 aa11.82□□□□□ -0.52
CCNF-204ENST00000564333 CARD19Q96LW7 228 aa11.82□□□□□ -0.52
CCNF-204ENST00000564333 HIVEP2P31629 2446 aa11.82□□□□□ -0.52
CCNF-204ENST00000564333 TRBV30A0A0K0K1B3 111 aa11.81□□□□□ -0.52
CCNF-204ENST00000564333 SPINK8P0C7L1 97 aa11.8□□□□□ -0.52
CCNF-204ENST00000564333 ANKRD29Q8N6D5 301 aa11.8□□□□□ -0.52
CCNF-204ENST00000564333 TIMM17BO60830 172 aa11.8□□□□□ -0.52
CCNF-204ENST00000564333 GAGE7O76087 117 aa11.8□□□□□ -0.52
CCNF-204ENST00000564333 GAGE12FP0CL80 117 aa11.8□□□□□ -0.52
CCNF-204ENST00000564333 GAGE12GP0CL81 117 aa11.8□□□□□ -0.52
CCNF-204ENST00000564333 GAGE12IP0CL82 117 aa11.8□□□□□ -0.52
CCNF-204ENST00000564333 CKS1BP61024 79 aa11.8□□□□□ -0.52
CCNF-204ENST00000564333 Q1RN00 199 aa11.8□□□□□ -0.52
CCNF-204ENST00000564333 TRGV2A0A075B6R0 118 aa11.79□□□□□ -0.52
CCNF-204ENST00000564333 DAZ4Q86SG3 579 aaKnown RBP11.79□□□□□ -0.52
CCNF-204ENST00000564333 DAZ3Q9NR90 486 aaKnown RBP11.79□□□□□ -0.52
CCNF-204ENST00000564333 GAGE12JA6NER3 117 aa11.78□□□□□ -0.52
CCNF-204ENST00000564333 C9JAW5 83 aa11.78□□□□□ -0.52
CCNF-204ENST00000564333 GAGE4Q13068 117 aa11.78□□□□□ -0.52
CCNF-204ENST00000564333 GAGE5Q13069 117 aa11.78□□□□□ -0.52
CCNF-204ENST00000564333 OVOL2Q9BRP0 275 aa11.78□□□□□ -0.52
CCNF-204ENST00000564333 COX6CP09669 75 aa11.78□□□□□ -0.52
CCNF-204ENST00000564333 IFITM1P13164 125 aa11.78□□□□□ -0.52
CCNF-204ENST00000564333 DGAT2L7PQ6IED9 249 aa11.78□□□□□ -0.52
CCNF-204ENST00000564333 VSIG2Q96IQ7 327 aa11.78□□□□□ -0.52
CCNF-204ENST00000564333 NDUFA12Q9UI09 145 aa11.78□□□□□ -0.52
CCNF-204ENST00000564333 MIAQ16674 131 aa11.77□□□□□ -0.53
CCNF-204ENST00000564333 LITAFQ99732 161 aa11.77□□□□□ -0.53
CCNF-204ENST00000564333 SETD2Q9BYW2 2564 aaPredicted RBP11.77□□□□□ -0.53
CCNF-204ENST00000564333 TRAV8-3A0A0A6YYJ7 113 aa11.76□□□□□ -0.53
CCNF-204ENST00000564333 GEMIN7Q9H840 131 aaKnown RBP11.76□□□□□ -0.53
CCNF-204ENST00000564333 F8P00451 2351 aa11.76□□□□□ -0.53
CCNF-204ENST00000564333 LINC01620Q4KN68 170 aa11.76□□□□□ -0.53
CCNF-204ENST00000564333 NTM-AS1Q6ZSK4 140 aa11.76□□□□□ -0.53
CCNF-204ENST00000564333 TRBV10-2A0A0K0K1G8 114 aa11.75□□□□□ -0.53
CCNF-204ENST00000564333 EIF4EBP3O60516 100 aaPredicted RBP11.75□□□□□ -0.53
CCNF-204ENST00000564333 LINC00694P0DN24 101 aa11.75□□□□□ -0.53
CCNF-204ENST00000564333 RPL13AP40429 203 aaKnown RBP11.75□□□□□ -0.53
CCNF-204ENST00000564333 ZFAND6Q6FIF0 208 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms