RNA–Protein interactions for RNA: ENST00000564269.1

AC055855.3-201, humanhuman

TSL 2 BASIC

Gene AC055855.3, Length 578 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055855.3-201ENST00000564269 LINC00526Q96FQ7 95 aa3.19□□□□□ -1.9
AC055855.3-201ENST00000564269 MED28Q9H204 178 aa3.19□□□□□ -1.9
AC055855.3-201ENST00000564269 PSORS1C2Q9UIG4 136 aa3.19□□□□□ -1.9
AC055855.3-201ENST00000564269 ALG5Q9Y673 324 aa3.19□□□□□ -1.9
AC055855.3-201ENST00000564269 DEFA1P59665 94 aa3.18□□□□□ -1.9
AC055855.3-201ENST00000564269 CACNG7P62955 275 aa3.18□□□□□ -1.9
AC055855.3-201ENST00000564269 LCE1FQ5T754 118 aa3.18□□□□□ -1.9
AC055855.3-201ENST00000564269 KRTAP5-1Q6L8H4 278 aa3.18□□□□□ -1.9
AC055855.3-201ENST00000564269 FER1L6-AS1Q8NA97 138 aa3.18□□□□□ -1.9
AC055855.3-201ENST00000564269 TMEM18Q96B42 140 aa3.18□□□□□ -1.9
AC055855.3-201ENST00000564269 CARD19Q96LW7 228 aa3.18□□□□□ -1.9
AC055855.3-201ENST00000564269 TPPP3Q9BW30 176 aa3.18□□□□□ -1.9
AC055855.3-201ENST00000564269 CYTL1Q9NRR1 136 aa3.18□□□□□ -1.9
AC055855.3-201ENST00000564269 PKIGQ9Y2B9 76 aa3.18□□□□□ -1.9
AC055855.3-201ENST00000564269 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.17□□□□□ -1.9
AC055855.3-201ENST00000564269 IGHV1-58A0A0C4DH39 117 aa3.17□□□□□ -1.9
AC055855.3-201ENST00000564269 LINC00959A0A1B0GUT2 108 aa3.17□□□□□ -1.9
AC055855.3-201ENST00000564269 IGKV2-29A2NJV5 120 aaPredicted RBP3.17□□□□□ -1.9
AC055855.3-201ENST00000564269 C19orf71A6NCJ1 209 aa3.17□□□□□ -1.9
AC055855.3-201ENST00000564269 F2Z2F3 143 aa3.17□□□□□ -1.9
AC055855.3-201ENST00000564269 H7C423 109 aa3.17□□□□□ -1.9
AC055855.3-201ENST00000564269 FGF6P10767 208 aa3.17□□□□□ -1.9
AC055855.3-201ENST00000564269 NTF3P20783 257 aa3.17□□□□□ -1.9
AC055855.3-201ENST00000564269 RPL35P42766 123 aaKnown RBP3.17□□□□□ -1.9
AC055855.3-201ENST00000564269 XCL1P47992 114 aa3.17□□□□□ -1.9
AC055855.3-201ENST00000564269 KRTAP10-12P60413 245 aa3.17□□□□□ -1.9
AC055855.3-201ENST00000564269 SYCNQ0VAF6 134 aa3.17□□□□□ -1.9
AC055855.3-201ENST00000564269 GAGE2BQ13066 116 aa3.17□□□□□ -1.9
AC055855.3-201ENST00000564269 C1orf137Q5JT78 98 aa3.17□□□□□ -1.9
AC055855.3-201ENST00000564269 AMMECR1LQ6DCA0 310 aa3.17□□□□□ -1.9
AC055855.3-201ENST00000564269 LYZL1Q6UWQ5 148 aa3.17□□□□□ -1.9
AC055855.3-201ENST00000564269 OR2D3Q8NGH3 330 aa3.17□□□□□ -1.9
AC055855.3-201ENST00000564269 OR5A1Q8NGJ0 315 aa3.17□□□□□ -1.9
AC055855.3-201ENST00000564269 MBD3L1Q8WWY6 194 aa3.17□□□□□ -1.9
AC055855.3-201ENST00000564269 IGLV5-37A0A075B6J1 123 aa3.16□□□□□ -1.9
AC055855.3-201ENST00000564269 FXYD6-FXYD2A0A087WZ82 144 aa3.16□□□□□ -1.9
AC055855.3-201ENST00000564269 TRAV26-2A0A0B4J265 109 aa3.16□□□□□ -1.9
AC055855.3-201ENST00000564269 A0A0U1RQV1 116 aa3.16□□□□□ -1.9
AC055855.3-201ENST00000564269 LOC107984640A0A0U1RRK4 108 aa3.16□□□□□ -1.9
AC055855.3-201ENST00000564269 A0A1B0GV50 99 aa3.16□□□□□ -1.9
AC055855.3-201ENST00000564269 G3V3Q6 166 aa3.16□□□□□ -1.9
AC055855.3-201ENST00000564269 CCL25O15444 150 aa3.16□□□□□ -1.9
AC055855.3-201ENST00000564269 PFDN1O60925 122 aa3.16□□□□□ -1.9
AC055855.3-201ENST00000564269 NCR2O95944 276 aa3.16□□□□□ -1.9
AC055855.3-201ENST00000564269 MT-ND6P03923 174 aa3.16□□□□□ -1.9
AC055855.3-201ENST00000564269 GIPP09681 153 aaPredicted RBP3.16□□□□□ -1.9
AC055855.3-201ENST00000564269 TRGC1P0CF51 173 aa3.16□□□□□ -1.9
AC055855.3-201ENST00000564269 ZNF25P17030 456 aaPredicted RBP3.16□□□□□ -1.9
AC055855.3-201ENST00000564269 RPS20P60866 119 aaKnown RBP3.16□□□□□ -1.9
AC055855.3-201ENST00000564269 RNASEKQ6P5S7 137 aaKnown RBP3.16□□□□□ -1.9
AC055855.3-201ENST00000564269 PHF5AQ7RTV0 110 aaKnown RBP3.16□□□□□ -1.9
AC055855.3-201ENST00000564269 SMIM29Q86T20 159 aa3.16□□□□□ -1.9
AC055855.3-201ENST00000564269 C9orf62Q8N4C0 152 aa3.16□□□□□ -1.9
AC055855.3-201ENST00000564269 GATD1Q8NB37 220 aa3.16□□□□□ -1.9
AC055855.3-201ENST00000564269 SFT2D1Q8WV19 159 aa3.16□□□□□ -1.9
AC055855.3-201ENST00000564269 IGLV4-69A0A075B6H9 119 aa3.15□□□□□ -1.91
AC055855.3-201ENST00000564269 H0Y9J4 135 aa3.15□□□□□ -1.91
AC055855.3-201ENST00000564269 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.15□□□□□ -1.91
AC055855.3-201ENST00000564269 APCSP02743 223 aa3.15□□□□□ -1.91
AC055855.3-201ENST00000564269 IGLV7-43P04211 117 aa3.15□□□□□ -1.91
AC055855.3-201ENST00000564269 KRTAP1-4P0C5Y4 121 aa3.15□□□□□ -1.91
AC055855.3-201ENST00000564269 BCL2P10415 239 aa3.15□□□□□ -1.91
AC055855.3-201ENST00000564269 CAMPP49913 170 aa3.15□□□□□ -1.91
AC055855.3-201ENST00000564269 MEF2BQ02080 365 aaPredicted RBP3.15□□□□□ -1.91
AC055855.3-201ENST00000564269 PRR4Q16378 134 aa3.15□□□□□ -1.91
AC055855.3-201ENST00000564269 C9orf116Q5BN46 136 aaPredicted RBP3.15□□□□□ -1.91
AC055855.3-201ENST00000564269 CD164L2Q6UWJ8 174 aa3.15□□□□□ -1.91
AC055855.3-201ENST00000564269 KCNRGQ8N5I3 272 aa3.15□□□□□ -1.91
AC055855.3-201ENST00000564269 NUP35Q8NFH5 326 aa3.15□□□□□ -1.91
AC055855.3-201ENST00000564269 DIRC1Q969H9 104 aa3.15□□□□□ -1.91
AC055855.3-201ENST00000564269 ISOC2Q96AB3 205 aa3.15□□□□□ -1.91
AC055855.3-201ENST00000564269 RPL39LQ96EH5 51 aaKnown RBP3.15□□□□□ -1.91
AC055855.3-201ENST00000564269 CDC42SE2Q9NRR3 84 aa3.15□□□□□ -1.91
AC055855.3-201ENST00000564269 IGLV1-50A0A075B6I6 118 aa3.14□□□□□ -1.91
AC055855.3-201ENST00000564269 XKRY2A2RUG3 117 aa3.14□□□□□ -1.91
AC055855.3-201ENST00000564269 RAB19A4D1S5 217 aa3.14□□□□□ -1.91
AC055855.3-201ENST00000564269 SDHAF1A6NFY7 115 aa3.14□□□□□ -1.91
AC055855.3-201ENST00000564269 KRTAP9-6A8MVA2 160 aa3.14□□□□□ -1.91
AC055855.3-201ENST00000564269 UMAD1C9J7I0 102 aa3.14□□□□□ -1.91
AC055855.3-201ENST00000564269 I3L3M4 83 aa3.14□□□□□ -1.91
AC055855.3-201ENST00000564269 APOMO95445 188 aa3.14□□□□□ -1.91
AC055855.3-201ENST00000564269 IFNA1P01562 189 aa3.14□□□□□ -1.91
AC055855.3-201ENST00000564269 ESDP10768 282 aa3.14□□□□□ -1.91
AC055855.3-201ENST00000564269 CTRLP40313 264 aa3.14□□□□□ -1.91
AC055855.3-201ENST00000564269 FOXA3P55318 350 aaPredicted RBP3.14□□□□□ -1.91
AC055855.3-201ENST00000564269 CCL20P78556 96 aa3.14□□□□□ -1.91
AC055855.3-201ENST00000564269 SS18Q15532 418 aa3.14□□□□□ -1.91
AC055855.3-201ENST00000564269 CENPWQ5EE01 88 aa3.14□□□□□ -1.91
AC055855.3-201ENST00000564269 KRTAP11-1Q8IUC1 163 aa3.14□□□□□ -1.91
AC055855.3-201ENST00000564269 FAM213BQ8TBF2 198 aa3.14□□□□□ -1.91
AC055855.3-201ENST00000564269 C11orf52Q96A22 123 aa3.14□□□□□ -1.91
AC055855.3-201ENST00000564269 SMIM12Q96EX1 92 aa3.14□□□□□ -1.91
AC055855.3-201ENST00000564269 TMEM101Q96IK0 257 aa3.14□□□□□ -1.91
AC055855.3-201ENST00000564269 BTF3L4Q96K17 158 aa3.14□□□□□ -1.91
AC055855.3-201ENST00000564269 CNFNQ9BYD5 112 aa3.14□□□□□ -1.91
AC055855.3-201ENST00000564269 MUC17Q685J3 4493 aa3.14□□□□□ -1.91
AC055855.3-201ENST00000564269 TRBV20OR9-2A0A075B6H5 130 aa3.13□□□□□ -1.91
AC055855.3-201ENST00000564269 TRBV6-5A0A0K0K1A5 114 aa3.13□□□□□ -1.91
AC055855.3-201ENST00000564269 ARPC5O15511 151 aa3.13□□□□□ -1.91
AC055855.3-201ENST00000564269 PMCHP20382 165 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms