RNA–Protein interactions for RNA: ENST00000564247.1

CMTM3-208, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,127 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-208ENST00000564247 WFDC10BQ8IUB3 73 aa11.57□□□□□ -0.56
CMTM3-208ENST00000564247 OR5A1Q8NGJ0 315 aa11.57□□□□□ -0.56
CMTM3-208ENST00000564247 TMEM141Q96I45 108 aa11.57□□□□□ -0.56
CMTM3-208ENST00000564247 UBE2D4Q9Y2X8 147 aa11.57□□□□□ -0.56
CMTM3-208ENST00000564247 C5orf52A6NGY3 159 aa11.56□□□□□ -0.56
CMTM3-208ENST00000564247 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.56□□□□□ -0.56
CMTM3-208ENST00000564247 ATP5LO75964 103 aa11.56□□□□□ -0.56
CMTM3-208ENST00000564247 HSPB8Q9UJY1 196 aa11.56□□□□□ -0.56
CMTM3-208ENST00000564247 CSDC2Q9Y534 153 aaKnown RBP11.56□□□□□ -0.56
CMTM3-208ENST00000564247 FABP4P15090 132 aa11.55□□□□□ -0.56
CMTM3-208ENST00000564247 RBX1P62877 108 aa11.55□□□□□ -0.56
CMTM3-208ENST00000564247 PAPPA-AS1Q5QFB9 102 aa11.55□□□□□ -0.56
CMTM3-208ENST00000564247 HIST3H2BBQ8N257 126 aa11.55□□□□□ -0.56
CMTM3-208ENST00000564247 TIMM17AQ99595 171 aa11.55□□□□□ -0.56
CMTM3-208ENST00000564247 Q9H8V8 135 aa11.55□□□□□ -0.56
CMTM3-208ENST00000564247 TRAV9-2A0A087WT02 112 aa11.54□□□□□ -0.56
CMTM3-208ENST00000564247 IGIPA6NJ69 53 aa11.54□□□□□ -0.56
CMTM3-208ENST00000564247 IGHV3-30P01768 117 aa11.54□□□□□ -0.56
CMTM3-208ENST00000564247 IGHV3-33P01772 117 aa11.54□□□□□ -0.56
CMTM3-208ENST00000564247 NPSP0C0P6 89 aa11.54□□□□□ -0.56
CMTM3-208ENST00000564247 IGHV3-30-3P0DP02 117 aa11.54□□□□□ -0.56
CMTM3-208ENST00000564247 IGHV3-30-5P0DP03 117 aa11.54□□□□□ -0.56
CMTM3-208ENST00000564247 MPV17L2Q567V2 206 aa11.54□□□□□ -0.56
CMTM3-208ENST00000564247 Q6ZN92 141 aa11.54□□□□□ -0.56
CMTM3-208ENST00000564247 PACRGQ96M98 296 aaPredicted RBP11.54□□□□□ -0.56
CMTM3-208ENST00000564247 DNAH10OSP0CZ25 163 aa11.53□□□□□ -0.56
CMTM3-208ENST00000564247 LINC01556Q5JQF7 62 aa11.53□□□□□ -0.56
CMTM3-208ENST00000564247 ZNF664Q8N3J9 261 aa11.53□□□□□ -0.56
CMTM3-208ENST00000564247 Q8N976 141 aa11.53□□□□□ -0.56
CMTM3-208ENST00000564247 VCX2Q9H322 139 aa11.53□□□□□ -0.56
CMTM3-208ENST00000564247 MRPS36P82909 103 aaKnown RBP11.52□□□□□ -0.57
CMTM3-208ENST00000564247 IFI27L1Q96BM0 104 aa11.52□□□□□ -0.57
CMTM3-208ENST00000564247 CDC42SE2Q9NRR3 84 aa11.52□□□□□ -0.57
CMTM3-208ENST00000564247 ANGP03950 147 aaKnown RBP11.51□□□□□ -0.57
CMTM3-208ENST00000564247 PRSS1P07477 247 aa11.51□□□□□ -0.57
CMTM3-208ENST00000564247 DNAH17Q9UFH2 4485 aa11.5□□□□□ -0.57
CMTM3-208ENST00000564247 FAT2Q9NYQ8 4349 aa11.5□□□□□ -0.57
CMTM3-208ENST00000564247 IGLV4-60A0A075B6I1 120 aa11.5□□□□□ -0.57
CMTM3-208ENST00000564247 IGLV4-3A0A075B6K6 122 aa11.5□□□□□ -0.57
CMTM3-208ENST00000564247 K7EP13 123 aa11.5□□□□□ -0.57
CMTM3-208ENST00000564247 OPRPNQ99935 248 aaPredicted RBP11.5□□□□□ -0.57
CMTM3-208ENST00000564247 MAP1LC3CQ9BXW4 147 aa11.5□□□□□ -0.57
CMTM3-208ENST00000564247 KLK12Q9UKR0 248 aa11.5□□□□□ -0.57
CMTM3-208ENST00000564247 TEX43Q6ZNM6 134 aa11.49□□□□□ -0.57
CMTM3-208ENST00000564247 Q6ZUT4 128 aa11.49□□□□□ -0.57
CMTM3-208ENST00000564247 C10orf126Q8N4M7 172 aa11.49□□□□□ -0.57
CMTM3-208ENST00000564247 HIST1H2BLQ99880 126 aa11.49□□□□□ -0.57
CMTM3-208ENST00000564247 C2orf88Q9BSF0 95 aa11.49□□□□□ -0.57
CMTM3-208ENST00000564247 LINC00173Q6ZV60 143 aa11.48□□□□□ -0.57
CMTM3-208ENST00000564247 LINC00269Q8N2A0 174 aa11.48□□□□□ -0.57
CMTM3-208ENST00000564247 Q8N3U1 123 aa11.48□□□□□ -0.57
CMTM3-208ENST00000564247 HECTD4Q9Y4D8 3996 aa11.47□□□□□ -0.57
CMTM3-208ENST00000564247 CRPP02741 224 aa11.47□□□□□ -0.57
CMTM3-208ENST00000564247 PMVKQ15126 192 aa11.47□□□□□ -0.57
CMTM3-208ENST00000564247 RNASE13Q5GAN3 156 aaKnown RBP11.47□□□□□ -0.57
CMTM3-208ENST00000564247 BAALCQ8WXS3 180 aa11.47□□□□□ -0.57
CMTM3-208ENST00000564247 IGKV3OR2-268A0A0C4DH90 116 aa11.46□□□□□ -0.57
CMTM3-208ENST00000564247 M0R2N4 97 aa11.46□□□□□ -0.57
CMTM3-208ENST00000564247 REG3AQ06141 175 aa11.46□□□□□ -0.57
CMTM3-208ENST00000564247 AMELXQ99217 191 aa11.46□□□□□ -0.57
CMTM3-208ENST00000564247 IFITM10A6NMD0 228 aa11.45□□□□□ -0.58
CMTM3-208ENST00000564247 H0Y8G0 127 aa11.45□□□□□ -0.58
CMTM3-208ENST00000564247 KRTDAPP60985 99 aa11.45□□□□□ -0.58
CMTM3-208ENST00000564247 TTC32Q5I0X7 151 aa11.45□□□□□ -0.58
CMTM3-208ENST00000564247 Q6ZR54 194 aa11.45□□□□□ -0.58
CMTM3-208ENST00000564247 FAM104AQ969W3 186 aa11.45□□□□□ -0.58
CMTM3-208ENST00000564247 UBE2WQ96B02 151 aa11.45□□□□□ -0.58
CMTM3-208ENST00000564247 CST9LQ9H4G1 147 aa11.45□□□□□ -0.58
CMTM3-208ENST00000564247 TRAV12-1A0A0B4J245 112 aa11.44□□□□□ -0.58
CMTM3-208ENST00000564247 PRSS29PA6NIE9 313 aa11.44□□□□□ -0.58
CMTM3-208ENST00000564247 IBA57-AS1B1ANH7 110 aa11.44□□□□□ -0.58
CMTM3-208ENST00000564247 CCL25O15444 150 aa11.44□□□□□ -0.58
CMTM3-208ENST00000564247 SS18Q15532 418 aa11.44□□□□□ -0.58
CMTM3-208ENST00000564247 LINC00336Q6ZUF6 198 aa11.44□□□□□ -0.58
CMTM3-208ENST00000564247 TRAV8-3A0A0A6YYJ7 113 aa11.43□□□□□ -0.58
CMTM3-208ENST00000564247 TRAV13-1A0A0B4J241 112 aa11.43□□□□□ -0.58
CMTM3-208ENST00000564247 NBDYA0A0U1RRE5 68 aa11.43□□□□□ -0.58
CMTM3-208ENST00000564247 SYS1-DBNDD2H3BUS1 97 aa11.43□□□□□ -0.58
CMTM3-208ENST00000564247 MIAQ16674 131 aa11.43□□□□□ -0.58
CMTM3-208ENST00000564247 ZC2HC1BQ5TFG8 222 aa11.43□□□□□ -0.58
CMTM3-208ENST00000564247 CLPSL2Q6UWE3 100 aa11.43□□□□□ -0.58
CMTM3-208ENST00000564247 PRR34Q9NV39 138 aa11.43□□□□□ -0.58
CMTM3-208ENST00000564247 C3orf79P0CE67 100 aa11.42□□□□□ -0.58
CMTM3-208ENST00000564247 PET117Q6UWS5 81 aa11.42□□□□□ -0.58
CMTM3-208ENST00000564247 OR10D4PQ8NGN7 298 aa11.42□□□□□ -0.58
CMTM3-208ENST00000564247 CHTOPQ9Y3Y2 248 aaKnown RBP11.42□□□□□ -0.58
CMTM3-208ENST00000564247 TRAV8-4A0A0B4J246 113 aa11.41□□□□□ -0.58
CMTM3-208ENST00000564247 LINC00959A0A1B0GUT2 108 aa11.41□□□□□ -0.58
CMTM3-208ENST00000564247 SEC11AP67812 179 aa11.41□□□□□ -0.58
CMTM3-208ENST00000564247 ENHOQ6UWT2 76 aa11.41□□□□□ -0.58
CMTM3-208ENST00000564247 SPATA12Q7Z6I5 190 aa11.41□□□□□ -0.58
CMTM3-208ENST00000564247 RTL8CO15255 209 aa11.4□□□□□ -0.58
CMTM3-208ENST00000564247 UBE2D1P51668 147 aa11.4□□□□□ -0.58
CMTM3-208ENST00000564247 RMI2Q96E14 147 aa11.4□□□□□ -0.58
CMTM3-208ENST00000564247 C20orf202A1L168 122 aa11.39□□□□□ -0.59
CMTM3-208ENST00000564247 Q9HAA7 133 aa11.39□□□□□ -0.59
CMTM3-208ENST00000564247 PKD1P98161 4303 aa11.39□□□□□ -0.59
CMTM3-208ENST00000564247 C1orf43Q9BWL3 253 aa11.38□□□□□ -0.59
CMTM3-208ENST00000564247 GEMIN7Q9H840 131 aaKnown RBP11.38□□□□□ -0.59
CMTM3-208ENST00000564247 PKHD1P08F94 4074 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms