RNA–Protein interactions for RNA: ENST00000563976.1

CYLD-206, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

TSL 4

Gene CYLD, Length 547 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-206ENST00000563976 PTH2Q96A98 100 aa2.76□□□□□ -1.97
CYLD-206ENST00000563976 ISOC2Q96AB3 205 aa2.76□□□□□ -1.97
CYLD-206ENST00000563976 UPK3BQ9BT76 320 aa2.76□□□□□ -1.97
CYLD-206ENST00000563976 GTSF1LQ9H1H1 148 aa2.76□□□□□ -1.97
CYLD-206ENST00000563976 DPH3P1Q9H4G8 78 aa2.76□□□□□ -1.97
CYLD-206ENST00000563976 DYNC2H1Q8NCM8 4307 aaKnown RBP2.76□□□□□ -1.97
CYLD-206ENST00000563976 F2Z2F3 143 aa2.75□□□□□ -1.97
CYLD-206ENST00000563976 SMKR1H3BMG3 65 aa2.75□□□□□ -1.97
CYLD-206ENST00000563976 H7C1H1 209 aa2.75□□□□□ -1.97
CYLD-206ENST00000563976 PSCAO43653 123 aa2.75□□□□□ -1.97
CYLD-206ENST00000563976 LINC00694P0DN24 101 aa2.75□□□□□ -1.97
CYLD-206ENST00000563976 FUSP35637 526 aaKnown RBP eCLIP2.75□□□□□ -1.97
CYLD-206ENST00000563976 FOXA3P55318 350 aaPredicted RBP2.75□□□□□ -1.97
CYLD-206ENST00000563976 RAB4BP61018 213 aa2.75□□□□□ -1.97
CYLD-206ENST00000563976 IFITM2Q01629 132 aa2.75□□□□□ -1.97
CYLD-206ENST00000563976 TMEM241Q24JQ0 296 aa2.75□□□□□ -1.97
CYLD-206ENST00000563976 CLLU1Q5K131 121 aa2.75□□□□□ -1.97
CYLD-206ENST00000563976 LELP1Q5T871 98 aa2.75□□□□□ -1.97
CYLD-206ENST00000563976 KCNIP4Q6PIL6 250 aa2.75□□□□□ -1.97
CYLD-206ENST00000563976 FAM231DQ6ZW35 169 aa2.75□□□□□ -1.97
CYLD-206ENST00000563976 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.75□□□□□ -1.97
CYLD-206ENST00000563976 RPL39LQ96EH5 51 aaKnown RBP2.75□□□□□ -1.97
CYLD-206ENST00000563976 URGCP-MRPS24S4R325 110 aa2.75□□□□□ -1.97
CYLD-206ENST00000563976 V9GYV3 84 aa2.75□□□□□ -1.97
CYLD-206ENST00000563976 TRBV7-3A0A075B6L6 115 aa2.74□□□□□ -1.97
CYLD-206ENST00000563976 A0A087WX48 190 aa2.74□□□□□ -1.97
CYLD-206ENST00000563976 TRBV10-1A0A0K0K1A3 114 aa2.74□□□□□ -1.97
CYLD-206ENST00000563976 A0A1B0GUT8 65 aa2.74□□□□□ -1.97
CYLD-206ENST00000563976 TMEM262E9PQX1 116 aa2.74□□□□□ -1.97
CYLD-206ENST00000563976 F8W036 122 aa2.74□□□□□ -1.97
CYLD-206ENST00000563976 HLA-DQA1P01909 254 aa2.74□□□□□ -1.97
CYLD-206ENST00000563976 CRPP02741 224 aa2.74□□□□□ -1.97
CYLD-206ENST00000563976 ANGP03950 147 aaKnown RBP2.74□□□□□ -1.97
CYLD-206ENST00000563976 UBE2D3P61077 147 aa2.74□□□□□ -1.97
CYLD-206ENST00000563976 UBE2D2P62837 147 aa2.74□□□□□ -1.97
CYLD-206ENST00000563976 FAM74A3Q4VXF1 159 aa2.74□□□□□ -1.97
CYLD-206ENST00000563976 RASL11AQ6T310 242 aa2.74□□□□□ -1.97
CYLD-206ENST00000563976 LINC00336Q6ZUF6 198 aa2.74□□□□□ -1.97
CYLD-206ENST00000563976 DAZ4Q86SG3 579 aaKnown RBP2.74□□□□□ -1.97
CYLD-206ENST00000563976 AMN1Q8IY45 258 aa2.74□□□□□ -1.97
CYLD-206ENST00000563976 TSKUQ8WUA8 353 aa2.74□□□□□ -1.97
CYLD-206ENST00000563976 DAZ3Q9NR90 486 aaKnown RBP2.74□□□□□ -1.97
CYLD-206ENST00000563976 OSTCQ9NRP0 149 aa2.74□□□□□ -1.97
CYLD-206ENST00000563976 RYR2Q92736 4967 aa2.73□□□□□ -1.97
CYLD-206ENST00000563976 TRBV25-1A0A075B6N4 114 aa2.73□□□□□ -1.97
CYLD-206ENST00000563976 IGKV2D-24A0A075B6R9 120 aa2.73□□□□□ -1.97
CYLD-206ENST00000563976 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.73□□□□□ -1.97
CYLD-206ENST00000563976 A0A087WWC5 75 aa2.73□□□□□ -1.97
CYLD-206ENST00000563976 TRBV6-8A0A0A6YYG3 113 aa2.73□□□□□ -1.97
CYLD-206ENST00000563976 IGHV1-24A0A0C4DH33 117 aa2.73□□□□□ -1.97
CYLD-206ENST00000563976 IGKV3OR2-268A0A0C4DH90 116 aa2.73□□□□□ -1.97
CYLD-206ENST00000563976 IGKV2-29A2NJV5 120 aaPredicted RBP2.73□□□□□ -1.97
CYLD-206ENST00000563976 C5orf52A6NGY3 159 aa2.73□□□□□ -1.97
CYLD-206ENST00000563976 M0QY20 66 aa2.73□□□□□ -1.97
CYLD-206ENST00000563976 UBE2L6O14933 153 aa2.73□□□□□ -1.97
CYLD-206ENST00000563976 LECT2O14960 151 aa2.73□□□□□ -1.97
CYLD-206ENST00000563976 APCSP02743 223 aa2.73□□□□□ -1.97
CYLD-206ENST00000563976 ADCYAP1P18509 176 aa2.73□□□□□ -1.97
CYLD-206ENST00000563976 COTL1Q14019 142 aa2.73□□□□□ -1.97
CYLD-206ENST00000563976 MPV17L2Q567V2 206 aa2.73□□□□□ -1.97
CYLD-206ENST00000563976 LINC01556Q5JQF7 62 aa2.73□□□□□ -1.97
CYLD-206ENST00000563976 SPATA12Q7Z6I5 190 aa2.73□□□□□ -1.97
CYLD-206ENST00000563976 C10orf126Q8N4M7 172 aa2.73□□□□□ -1.97
CYLD-206ENST00000563976 Q8N976 141 aa2.73□□□□□ -1.97
CYLD-206ENST00000563976 GATD1Q8NB37 220 aa2.73□□□□□ -1.97
CYLD-206ENST00000563976 NUP35Q8NFH5 326 aa2.73□□□□□ -1.97
CYLD-206ENST00000563976 UBE2WQ96B02 151 aa2.73□□□□□ -1.97
CYLD-206ENST00000563976 TMEM242Q9NWH2 141 aa2.73□□□□□ -1.97
CYLD-206ENST00000563976 NAT8BQ9UHF3 227 aa2.73□□□□□ -1.97
CYLD-206ENST00000563976 KLK12Q9UKR0 248 aa2.73□□□□□ -1.97
CYLD-206ENST00000563976 HYDINQ4G0P3 5121 aa2.73□□□□□ -1.97
CYLD-206ENST00000563976 DNAH6Q9C0G6 4158 aa2.73□□□□□ -1.97
CYLD-206ENST00000563976 IGLV10-54A0A075B6I4 117 aa2.72□□□□□ -1.97
CYLD-206ENST00000563976 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.72□□□□□ -1.97
CYLD-206ENST00000563976 SDHAF1A6NFY7 115 aa2.72□□□□□ -1.97
CYLD-206ENST00000563976 C16orf90A8MZG2 172 aa2.72□□□□□ -1.97
CYLD-206ENST00000563976 PPP1R2P9O14990 202 aa2.72□□□□□ -1.97
CYLD-206ENST00000563976 NDUFS6O75380 124 aaKnown RBP2.72□□□□□ -1.97
CYLD-206ENST00000563976 PMCHP20382 165 aa2.72□□□□□ -1.97
CYLD-206ENST00000563976 RPS10P46783 165 aaKnown RBP2.72□□□□□ -1.97
CYLD-206ENST00000563976 KRTAP10-1P60331 282 aa2.72□□□□□ -1.97
CYLD-206ENST00000563976 HBBP68871 147 aa2.72□□□□□ -1.97
CYLD-206ENST00000563976 C9orf129Q5T035 196 aaKnown RBP2.72□□□□□ -1.97
CYLD-206ENST00000563976 AMMECR1LQ6DCA0 310 aa2.72□□□□□ -1.97
CYLD-206ENST00000563976 Q6ZRN7 208 aaPredicted RBP2.72□□□□□ -1.97
CYLD-206ENST00000563976 NTM-AS1Q6ZSK4 140 aa2.72□□□□□ -1.97
CYLD-206ENST00000563976 NIT1Q86X76 327 aa2.72□□□□□ -1.97
CYLD-206ENST00000563976 DNAJC30Q96LL9 226 aa2.72□□□□□ -1.97
CYLD-206ENST00000563976 TMEM243Q9BU79 118 aa2.72□□□□□ -1.97
CYLD-206ENST00000563976 CNFNQ9BYD5 112 aa2.72□□□□□ -1.97
CYLD-206ENST00000563976 SMDT1Q9H4I9 107 aa2.72□□□□□ -1.97
CYLD-206ENST00000563976 NIT2Q9NQR4 276 aa2.72□□□□□ -1.97
CYLD-206ENST00000563976 KMT2CQ8NEZ4 4911 aaKnown RBP2.71□□□□□ -1.98
CYLD-206ENST00000563976 SMIM27A0A1W2PRY6 76 aa2.71□□□□□ -1.98
CYLD-206ENST00000563976 MT-ND4LP03901 98 aa2.71□□□□□ -1.98
CYLD-206ENST00000563976 FCER1GP30273 86 aa2.71□□□□□ -1.98
CYLD-206ENST00000563976 MRPL51Q4U2R6 128 aaKnown RBP2.71□□□□□ -1.98
CYLD-206ENST00000563976 TMEM97Q5BJF2 176 aa2.71□□□□□ -1.98
CYLD-206ENST00000563976 RNASE13Q5GAN3 156 aaKnown RBP2.71□□□□□ -1.98
CYLD-206ENST00000563976 RNASEKQ6P5S7 137 aaKnown RBP2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms