RNA–Protein interactions for RNA: ENST00000563960.1

AC138869.3-201, humanhuman

TSL 1 (best) BASIC

Gene AC138869.3, Length 2,486 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC138869.3-201ENST00000563960 MIAQ16674 131 aa6.75□□□□□ -1.33
AC138869.3-201ENST00000563960 FANCD2OSQ96PS1 177 aa6.75□□□□□ -1.33
AC138869.3-201ENST00000563960 M0R1W7 72 aa6.75□□□□□ -1.33
AC138869.3-201ENST00000563960 SYNJ2BPP57105 145 aa6.75□□□□□ -1.33
AC138869.3-201ENST00000563960 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.75□□□□□ -1.33
AC138869.3-201ENST00000563960 C9orf85Q96MD7 179 aa6.75□□□□□ -1.33
AC138869.3-201ENST00000563960 SIRPDQ9H106 197 aa6.75□□□□□ -1.33
AC138869.3-201ENST00000563960 PHLDA3Q9Y5J5 127 aa6.75□□□□□ -1.33
AC138869.3-201ENST00000563960 IGHV3-35A0A0C4DH35 117 aa6.74□□□□□ -1.33
AC138869.3-201ENST00000563960 A0A0J9YXV3 536 aa6.74□□□□□ -1.33
AC138869.3-201ENST00000563960 LINC01561Q8N1V8 128 aa6.74□□□□□ -1.33
AC138869.3-201ENST00000563960 LINC01356Q8N9X3 169 aa6.74□□□□□ -1.33
AC138869.3-201ENST00000563960 SMR3AQ99954 134 aa6.74□□□□□ -1.33
AC138869.3-201ENST00000563960 TEP1Q99973 2627 aaKnown RBP6.74□□□□□ -1.33
AC138869.3-201ENST00000563960 IGLV11-55A0A075B6I3 123 aa6.74□□□□□ -1.33
AC138869.3-201ENST00000563960 IGKV3D-7A0A0C4DH55 119 aa6.74□□□□□ -1.33
AC138869.3-201ENST00000563960 IGF1P05019 195 aa6.74□□□□□ -1.33
AC138869.3-201ENST00000563960 LINC00315P59091 139 aa6.74□□□□□ -1.33
AC138869.3-201ENST00000563960 BEAN1Q3B7T3 259 aa6.74□□□□□ -1.33
AC138869.3-201ENST00000563960 BRD3OSQ6XYD6 125 aa6.74□□□□□ -1.33
AC138869.3-201ENST00000563960 IGHV4OR15-8A0A075B7B6 117 aa6.73□□□□□ -1.33
AC138869.3-201ENST00000563960 A0A087WW49 117 aa6.73□□□□□ -1.33
AC138869.3-201ENST00000563960 USP17L23D6RBM5 183 aa6.73□□□□□ -1.33
AC138869.3-201ENST00000563960 VCYO14598 125 aa6.73□□□□□ -1.33
AC138869.3-201ENST00000563960 IGHV1-69P01742 117 aa6.73□□□□□ -1.33
AC138869.3-201ENST00000563960 CTSGP08311 255 aa6.73□□□□□ -1.33
AC138869.3-201ENST00000563960 BAALC-AS2P0C853 105 aa6.73□□□□□ -1.33
AC138869.3-201ENST00000563960 S100A4P26447 101 aaKnown RBP6.73□□□□□ -1.33
AC138869.3-201ENST00000563960 NIPBLQ6KC79 2804 aaeCLIP6.73□□□□□ -1.33
AC138869.3-201ENST00000563960 EPM2AB3EWF7 344 aa6.73□□□□□ -1.33
AC138869.3-201ENST00000563960 COX7A2LO14548 114 aa6.73□□□□□ -1.33
AC138869.3-201ENST00000563960 BUB3O43684 328 aa6.73□□□□□ -1.33
AC138869.3-201ENST00000563960 IGHV4-38-2P0DP08 117 aa6.73□□□□□ -1.33
AC138869.3-201ENST00000563960 C9orf47Q6ZRZ4 202 aa6.73□□□□□ -1.33
AC138869.3-201ENST00000563960 C9orf139Q6ZV77 190 aa6.73□□□□□ -1.33
AC138869.3-201ENST00000563960 FAM223AQ8IWN6 122 aa6.73□□□□□ -1.33
AC138869.3-201ENST00000563960 RNF5Q99942 180 aa6.73□□□□□ -1.33
AC138869.3-201ENST00000563960 CR1P17927 2039 aa6.73□□□□□ -1.33
AC138869.3-201ENST00000563960 NF1P21359 2839 aa6.73□□□□□ -1.33
AC138869.3-201ENST00000563960 IGHV3-66A0A0C4DH42 116 aa6.72□□□□□ -1.33
AC138869.3-201ENST00000563960 KIF25-AS1Q9Y6Z4 181 aa6.72□□□□□ -1.33
AC138869.3-201ENST00000563960 NXPH4O95158 308 aa6.72□□□□□ -1.33
AC138869.3-201ENST00000563960 ZNF415Q09FC8 603 aa6.72□□□□□ -1.33
AC138869.3-201ENST00000563960 FAM236DA0A1B0GTK5 79 aa6.71□□□□□ -1.33
AC138869.3-201ENST00000563960 FAM223BA6NKX1 122 aa6.71□□□□□ -1.33
AC138869.3-201ENST00000563960 NBR2O15453 112 aa6.71□□□□□ -1.33
AC138869.3-201ENST00000563960 INAFM2P0DMQ5 153 aa6.71□□□□□ -1.33
AC138869.3-201ENST00000563960 FAM236CP0DP71 79 aa6.71□□□□□ -1.33
AC138869.3-201ENST00000563960 SAA4P35542 130 aa6.71□□□□□ -1.33
AC138869.3-201ENST00000563960 SUMO4Q6EEV6 95 aa6.71□□□□□ -1.33
AC138869.3-201ENST00000563960 C16orf95Q9H693 158 aa6.71□□□□□ -1.33
AC138869.3-201ENST00000563960 DPM3Q9P2X0 92 aa6.71□□□□□ -1.33
AC138869.3-201ENST00000563960 NDUFA12Q9UI09 145 aa6.71□□□□□ -1.33
AC138869.3-201ENST00000563960 HIVEP2P31629 2446 aa6.71□□□□□ -1.33
AC138869.3-201ENST00000563960 MUC4Q99102 2169 aa6.71□□□□□ -1.34
AC138869.3-201ENST00000563960 F8P00451 2351 aa6.71□□□□□ -1.34
AC138869.3-201ENST00000563960 IGHV3OR16-13A0A075B7E8 117 aa6.71□□□□□ -1.34
AC138869.3-201ENST00000563960 IGHV3-74A0A0B4J1X5 117 aa6.71□□□□□ -1.34
AC138869.3-201ENST00000563960 TRBV27A0A0K0K1C4 114 aa6.71□□□□□ -1.34
AC138869.3-201ENST00000563960 CLPSL1A2RUU4 121 aa6.71□□□□□ -1.34
AC138869.3-201ENST00000563960 NDUFC2-KCTD14E9PQ53 114 aa6.71□□□□□ -1.34
AC138869.3-201ENST00000563960 Q6JHZ5 121 aa6.71□□□□□ -1.34
AC138869.3-201ENST00000563960 V9GYY9 64 aa6.71□□□□□ -1.34
AC138869.3-201ENST00000563960 A8MZ25 164 aa6.7□□□□□ -1.34
AC138869.3-201ENST00000563960 NDUFC2O95298 119 aa6.7□□□□□ -1.34
AC138869.3-201ENST00000563960 PF4P02776 101 aa6.7□□□□□ -1.34
AC138869.3-201ENST00000563960 PSMB8P28062 276 aa6.7□□□□□ -1.34
AC138869.3-201ENST00000563960 PRIMA1Q86XR5 153 aa6.7□□□□□ -1.34
AC138869.3-201ENST00000563960 NPBQ8NG41 125 aa6.7□□□□□ -1.34
AC138869.3-201ENST00000563960 ODF3BA8MYP8 253 aa6.7□□□□□ -1.34
AC138869.3-201ENST00000563960 GNRH2O43555 120 aa6.7□□□□□ -1.34
AC138869.3-201ENST00000563960 RNASE3P12724 160 aaKnown RBP6.7□□□□□ -1.34
AC138869.3-201ENST00000563960 FAM222AQ5U5X8 452 aa6.7□□□□□ -1.34
AC138869.3-201ENST00000563960 Q8N2B8 174 aa6.7□□□□□ -1.34
AC138869.3-201ENST00000563960 SETD2Q9BYW2 2564 aaPredicted RBP6.69□□□□□ -1.34
AC138869.3-201ENST00000563960 TRAV12-2A0A075B6T6 113 aa6.69□□□□□ -1.34
AC138869.3-201ENST00000563960 KRTAP1-1Q07627 177 aa6.69□□□□□ -1.34
AC138869.3-201ENST00000563960 CUBNO60494 3623 aa6.69□□□□□ -1.34
AC138869.3-201ENST00000563960 IGLV4-3A0A075B6K6 122 aa6.69□□□□□ -1.34
AC138869.3-201ENST00000563960 IGHV1-58A0A0C4DH39 117 aa6.69□□□□□ -1.34
AC138869.3-201ENST00000563960 ZFAND2AQ8N6M9 145 aa6.69□□□□□ -1.34
AC138869.3-201ENST00000563960 FAM218AQ96MZ4 157 aa6.69□□□□□ -1.34
AC138869.3-201ENST00000563960 TMEM243Q9BU79 118 aa6.69□□□□□ -1.34
AC138869.3-201ENST00000563960 LINC00846Q9NV44 126 aa6.69□□□□□ -1.34
AC138869.3-201ENST00000563960 MED14OSP0DP75 135 aa6.68□□□□□ -1.34
AC138869.3-201ENST00000563960 MRPL53Q96EL3 112 aaKnown RBP6.68□□□□□ -1.34
AC138869.3-201ENST00000563960 SERP1Q9Y6X1 66 aa6.68□□□□□ -1.34
AC138869.3-201ENST00000563960 JMJD1CQ15652 2540 aa6.68□□□□□ -1.34
AC138869.3-201ENST00000563960 A0A087WWL8 130 aa6.68□□□□□ -1.34
AC138869.3-201ENST00000563960 TRAV21A0A0B4J279 112 aa6.68□□□□□ -1.34
AC138869.3-201ENST00000563960 NDPQ00604 133 aa6.68□□□□□ -1.34
AC138869.3-201ENST00000563960 FP248Q71RG6 208 aaPredicted RBP6.68□□□□□ -1.34
AC138869.3-201ENST00000563960 UBE2D4Q9Y2X8 147 aa6.68□□□□□ -1.34
AC138869.3-201ENST00000563960 NSD1Q96L73 2696 aaPredicted RBP6.68□□□□□ -1.34
AC138869.3-201ENST00000563960 F5H697 171 aa6.67□□□□□ -1.34
AC138869.3-201ENST00000563960 DNAL4O96015 105 aa6.67□□□□□ -1.34
AC138869.3-201ENST00000563960 C9orf129Q5T035 196 aaKnown RBP6.67□□□□□ -1.34
AC138869.3-201ENST00000563960 C16orf92Q96LL3 132 aa6.67□□□□□ -1.34
AC138869.3-201ENST00000563960 IGHV3-49A0A0A0MS15 119 aa6.67□□□□□ -1.34
AC138869.3-201ENST00000563960 TRBV6-5A0A0K0K1A5 114 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms