RNA–Protein interactions for RNA: ENST00000563590.2

CCDC187-201, Transcript of coiled-coil domain containing 187, humanhuman

TSL 1 (best)

Gene CCDC187, Length 3,543 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187-201ENST00000563590 Q9H8V8 135 aa9.43□□□□□ -0.9
CCDC187-201ENST00000563590 LENEPQ9Y5L5 61 aa9.43□□□□□ -0.9
CCDC187-201ENST00000563590 SDIM1Q6ZPB5 146 aa9.42□□□□□ -0.9
CCDC187-201ENST00000563590 PRIMA1Q86XR5 153 aa9.42□□□□□ -0.9
CCDC187-201ENST00000563590 DAZ2Q13117 558 aaKnown RBP9.42□□□□□ -0.9
CCDC187-201ENST00000563590 Q6Q795 121 aa9.42□□□□□ -0.9
CCDC187-201ENST00000563590 DAZ4Q86SG3 579 aaKnown RBP9.42□□□□□ -0.9
CCDC187-201ENST00000563590 AMELXQ99217 191 aa9.42□□□□□ -0.9
CCDC187-201ENST00000563590 DAZ1Q9NQZ3 744 aaKnown RBP9.42□□□□□ -0.9
CCDC187-201ENST00000563590 DAZ3Q9NR90 486 aaKnown RBP9.42□□□□□ -0.9
CCDC187-201ENST00000563590 NDUFA7O95182 113 aa9.42□□□□□ -0.9
CCDC187-201ENST00000563590 LINC00315P59091 139 aa9.41□□□□□ -0.9
CCDC187-201ENST00000563590 C11orf71Q6IPW1 123 aa9.41□□□□□ -0.9
CCDC187-201ENST00000563590 GCN1Q92616 2671 aaKnown RBP9.41□□□□□ -0.9
CCDC187-201ENST00000563590 SIRPDQ9H106 197 aa9.41□□□□□ -0.9
CCDC187-201ENST00000563590 SNRPD3P62318 126 aaKnown RBP9.4□□□□□ -0.9
CCDC187-201ENST00000563590 MIAQ16674 131 aa9.4□□□□□ -0.9
CCDC187-201ENST00000563590 DEFB112Q30KQ8 113 aa9.4□□□□□ -0.9
CCDC187-201ENST00000563590 TINCRA0A1B0GVN0 87 aa9.4□□□□□ -0.9
CCDC187-201ENST00000563590 LST1O00453 97 aa9.4□□□□□ -0.9
CCDC187-201ENST00000563590 C3orf22Q8N5N4 141 aa9.4□□□□□ -0.9
CCDC187-201ENST00000563590 POM121L12Q8N7R1 296 aa9.4□□□□□ -0.9
CCDC187-201ENST00000563590 DYNLRB2Q8TF09 96 aa9.4□□□□□ -0.9
CCDC187-201ENST00000563590 TRBV27A0A0K0K1C4 114 aa9.4□□□□□ -0.91
CCDC187-201ENST00000563590 M0QY20 66 aa9.4□□□□□ -0.91
CCDC187-201ENST00000563590 AVPP01185 164 aa9.4□□□□□ -0.91
CCDC187-201ENST00000563590 KIF25-AS1Q9Y6Z4 181 aa9.4□□□□□ -0.91
CCDC187-201ENST00000563590 IGHV1-58A0A0C4DH39 117 aa9.39□□□□□ -0.91
CCDC187-201ENST00000563590 A0A1B0GX51 115 aa9.39□□□□□ -0.91
CCDC187-201ENST00000563590 C5orf56Q8N8D9 126 aa9.39□□□□□ -0.91
CCDC187-201ENST00000563590 CDKN2A-AS1Q9UH64 79 aa9.39□□□□□ -0.91
CCDC187-201ENST00000563590 ATRQ13535 2644 aa9.39□□□□□ -0.91
CCDC187-201ENST00000563590 CFHR3Q02985 330 aa9.39□□□□□ -0.91
CCDC187-201ENST00000563590 TMEM61Q8N0U2 210 aa9.39□□□□□ -0.91
CCDC187-201ENST00000563590 IGHV1OR15-1A0A075B7D0 117 aa9.38□□□□□ -0.91
CCDC187-201ENST00000563590 J3KT08 172 aa9.38□□□□□ -0.91
CCDC187-201ENST00000563590 MSMBP08118 114 aa9.38□□□□□ -0.91
CCDC187-201ENST00000563590 C11orf68Q9H3H3 251 aaKnown RBP9.38□□□□□ -0.91
CCDC187-201ENST00000563590 SPANXA1Q9NS26 97 aa9.38□□□□□ -0.91
CCDC187-201ENST00000563590 IGHV4OR15-8A0A075B7B6 117 aa9.38□□□□□ -0.91
CCDC187-201ENST00000563590 A0A087WW49 117 aa9.38□□□□□ -0.91
CCDC187-201ENST00000563590 DEFB131AP59861 70 aa9.38□□□□□ -0.91
CCDC187-201ENST00000563590 FAM19A5Q7Z5A7 132 aaPredicted RBP9.38□□□□□ -0.91
CCDC187-201ENST00000563590 LINC01587Q99440 93 aa9.38□□□□□ -0.91
CCDC187-201ENST00000563590 NDUFA4O00483 81 aa9.37□□□□□ -0.91
CCDC187-201ENST00000563590 SOCS3O14543 225 aa9.37□□□□□ -0.91
CCDC187-201ENST00000563590 TRACP01848 142 aa9.37□□□□□ -0.91
CCDC187-201ENST00000563590 MED14OSP0DP75 135 aa9.37□□□□□ -0.91
CCDC187-201ENST00000563590 CSDC2Q9Y534 153 aaKnown RBP9.37□□□□□ -0.91
CCDC187-201ENST00000563590 UQCRQO14949 82 aa9.37□□□□□ -0.91
CCDC187-201ENST00000563590 APRG1Q8IVJ8 170 aa9.37□□□□□ -0.91
CCDC187-201ENST00000563590 XCL2Q9UBD3 114 aa9.36□□□□□ -0.91
CCDC187-201ENST00000563590 KLK9Q2XQG4 91 aa9.36□□□□□ -0.91
CCDC187-201ENST00000563590 LINC00643Q86TS7 51 aa9.36□□□□□ -0.91
CCDC187-201ENST00000563590 Q9UF83 564 aa9.36□□□□□ -0.91
CCDC187-201ENST00000563590 UBR5O95071 2799 aaPredicted RBP9.36□□□□□ -0.91
CCDC187-201ENST00000563590 PIK3CD-AS1Q5SR53 167 aa9.36□□□□□ -0.91
CCDC187-201ENST00000563590 C14orf132Q9NPU4 83 aa9.36□□□□□ -0.91
CCDC187-201ENST00000563590 PEMTQ9UBM1 199 aa9.36□□□□□ -0.91
CCDC187-201ENST00000563590 A0A087WVE0 104 aa9.35□□□□□ -0.91
CCDC187-201ENST00000563590 VSIG2Q96IQ7 327 aa9.35□□□□□ -0.91
CCDC187-201ENST00000563590 FAM223BA6NKX1 122 aa9.35□□□□□ -0.91
CCDC187-201ENST00000563590 KRTAP10-9P60411 292 aa9.35□□□□□ -0.91
CCDC187-201ENST00000563590 C19orf54Q5BKX5 351 aa9.35□□□□□ -0.91
CCDC187-201ENST00000563590 C18orf65Q6ZTR6 163 aa9.35□□□□□ -0.91
CCDC187-201ENST00000563590 FAM223AQ8IWN6 122 aa9.35□□□□□ -0.91
CCDC187-201ENST00000563590 FAM19A4Q96LR4 140 aa9.35□□□□□ -0.91
CCDC187-201ENST00000563590 ATP5G1P05496 136 aa9.35□□□□□ -0.91
CCDC187-201ENST00000563590 SLURP1P55000 103 aa9.35□□□□□ -0.91
CCDC187-201ENST00000563590 DSCR8Q96T75 97 aa9.35□□□□□ -0.91
CCDC187-201ENST00000563590 LINC00158P58513 81 aa9.34□□□□□ -0.91
CCDC187-201ENST00000563590 TIRAPP58753 221 aa9.34□□□□□ -0.91
CCDC187-201ENST00000563590 DNAJC30Q96LL9 226 aa9.34□□□□□ -0.91
CCDC187-201ENST00000563590 B4DSR2 109 aa9.33□□□□□ -0.92
CCDC187-201ENST00000563590 CRPP02741 224 aa9.33□□□□□ -0.92
CCDC187-201ENST00000563590 RNF152Q8N8N0 203 aa9.33□□□□□ -0.92
CCDC187-201ENST00000563590 SMCR5Q8TEV8 140 aa9.33□□□□□ -0.92
CCDC187-201ENST00000563590 ITPR2Q14571 2701 aa9.33□□□□□ -0.92
CCDC187-201ENST00000563590 J3QKU1 62 aa9.33□□□□□ -0.92
CCDC187-201ENST00000563590 ACYP1P07311 99 aa9.33□□□□□ -0.92
CCDC187-201ENST00000563590 ZFHX3Q15911 3703 aa9.32□□□□□ -0.92
CCDC187-201ENST00000563590 C5orf47Q569G3 176 aa9.32□□□□□ -0.92
CCDC187-201ENST00000563590 Q8N2B8 174 aa9.32□□□□□ -0.92
CCDC187-201ENST00000563590 C10orf105Q8TEF2 133 aa9.32□□□□□ -0.92
CCDC187-201ENST00000563590 LINC00467Q9BRT7 94 aa9.32□□□□□ -0.92
CCDC187-201ENST00000563590 SMIM9A6NGZ8 99 aa9.32□□□□□ -0.92
CCDC187-201ENST00000563590 PFN2P35080 140 aa9.32□□□□□ -0.92
CCDC187-201ENST00000563590 NIPBLQ6KC79 2804 aaeCLIP9.32□□□□□ -0.92
CCDC187-201ENST00000563590 LINC00308Q8TCZ7 52 aa9.32□□□□□ -0.92
CCDC187-201ENST00000563590 Q96MF0 132 aa9.32□□□□□ -0.92
CCDC187-201ENST00000563590 COX7A2LO14548 114 aa9.31□□□□□ -0.92
CCDC187-201ENST00000563590 INAFM2P0DMQ5 153 aa9.31□□□□□ -0.92
CCDC187-201ENST00000563590 KIR2DL5BQ8NHK3 375 aa9.31□□□□□ -0.92
CCDC187-201ENST00000563590 SLPIP03973 132 aa9.31□□□□□ -0.92
CCDC187-201ENST00000563590 RPL35AP18077 110 aaKnown RBP9.31□□□□□ -0.92
CCDC187-201ENST00000563590 MXRA5Q9NR99 2828 aa9.3□□□□□ -0.92
CCDC187-201ENST00000563590 PAX4O43316 350 aa9.3□□□□□ -0.92
CCDC187-201ENST00000563590 KLLNB2CW77 178 aa9.3□□□□□ -0.92
CCDC187-201ENST00000563590 TRBV7-7A0A0K0K1E9 115 aa9.3□□□□□ -0.92
CCDC187-201ENST00000563590 FAM240AA0A1B0GVK7 77 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms