RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 LINC01549A6NIU2 74 aa12.63□□□□□ -0.39
RAB40C-207ENST00000563109 ENHOQ6UWT2 76 aa12.63□□□□□ -0.39
RAB40C-207ENST00000563109 ZNF664Q8N3J9 261 aa12.63□□□□□ -0.39
RAB40C-207ENST00000563109 C1orf43Q9BWL3 253 aa12.63□□□□□ -0.39
RAB40C-207ENST00000563109 IGKV2D-24A0A075B6R9 120 aa12.62□□□□□ -0.39
RAB40C-207ENST00000563109 IGKV3OR2-268A0A0C4DH90 116 aa12.62□□□□□ -0.39
RAB40C-207ENST00000563109 PSCAO43653 123 aa12.62□□□□□ -0.39
RAB40C-207ENST00000563109 CDC42SE2Q9NRR3 84 aa12.62□□□□□ -0.39
RAB40C-207ENST00000563109 PYGO1Q9Y3Y4 419 aa12.62□□□□□ -0.39
RAB40C-207ENST00000563109 COX11Q9Y6N1 276 aa12.62□□□□□ -0.39
RAB40C-207ENST00000563109 Q6ZUT4 128 aa12.61□□□□□ -0.39
RAB40C-207ENST00000563109 CHCHD1Q96BP2 118 aaKnown RBP12.61□□□□□ -0.39
RAB40C-207ENST00000563109 TRAV8-4A0A0B4J246 113 aa12.6□□□□□ -0.39
RAB40C-207ENST00000563109 RTL8CO15255 209 aa12.6□□□□□ -0.39
RAB40C-207ENST00000563109 MRPS36P82909 103 aaKnown RBP12.6□□□□□ -0.39
RAB40C-207ENST00000563109 LINC00336Q6ZUF6 198 aa12.6□□□□□ -0.39
RAB40C-207ENST00000563109 TOMM6Q96B49 74 aa12.6□□□□□ -0.39
RAB40C-207ENST00000563109 URB1-AS1Q96HZ7 61 aa12.6□□□□□ -0.39
RAB40C-207ENST00000563109 Q6ZN92 141 aa12.59□□□□□ -0.39
RAB40C-207ENST00000563109 Q6ZRN7 208 aaPredicted RBP12.59□□□□□ -0.39
RAB40C-207ENST00000563109 HBDP02042 147 aa12.58□□□□□ -0.4
RAB40C-207ENST00000563109 NPSP0C0P6 89 aa12.58□□□□□ -0.4
RAB40C-207ENST00000563109 RNASE13Q5GAN3 156 aaKnown RBP12.58□□□□□ -0.4
RAB40C-207ENST00000563109 TMEM141Q96I45 108 aa12.58□□□□□ -0.4
RAB40C-207ENST00000563109 SCGB3A1Q96QR1 104 aa12.58□□□□□ -0.4
RAB40C-207ENST00000563109 RYR3Q15413 4870 aa12.57□□□□□ -0.4
RAB40C-207ENST00000563109 IGLV10-54A0A075B6I4 117 aa12.57□□□□□ -0.4
RAB40C-207ENST00000563109 IGLV4-3A0A075B6K6 122 aa12.57□□□□□ -0.4
RAB40C-207ENST00000563109 C1orf196B1AJZ1 125 aa12.57□□□□□ -0.4
RAB40C-207ENST00000563109 HSBP1O75506 76 aa12.57□□□□□ -0.4
RAB40C-207ENST00000563109 PAPPA-AS1Q5QFB9 102 aa12.57□□□□□ -0.4
RAB40C-207ENST00000563109 TIMM17AQ99595 171 aa12.57□□□□□ -0.4
RAB40C-207ENST00000563109 PRSS29PA6NIE9 313 aa12.56□□□□□ -0.4
RAB40C-207ENST00000563109 SS18Q15532 418 aa12.56□□□□□ -0.4
RAB40C-207ENST00000563109 PMCHL1Q16048 86 aa12.56□□□□□ -0.4
RAB40C-207ENST00000563109 ERASQ7Z444 233 aa12.56□□□□□ -0.4
RAB40C-207ENST00000563109 IGIPA6NJ69 53 aa12.55□□□□□ -0.4
RAB40C-207ENST00000563109 IFITM10A6NMD0 228 aa12.55□□□□□ -0.4
RAB40C-207ENST00000563109 HIST1H2BKO60814 126 aa12.55□□□□□ -0.4
RAB40C-207ENST00000563109 HIST1H2BJP06899 126 aa12.55□□□□□ -0.4
RAB40C-207ENST00000563109 HIST1H2BOP23527 126 aa12.55□□□□□ -0.4
RAB40C-207ENST00000563109 HIST1H2BBP33778 126 aa12.55□□□□□ -0.4
RAB40C-207ENST00000563109 HIST1H2BDP58876 126 aa12.55□□□□□ -0.4
RAB40C-207ENST00000563109 HIST1H2BCP62807 126 aa12.55□□□□□ -0.4
RAB40C-207ENST00000563109 HIST2H2BEQ16778 126 aa12.55□□□□□ -0.4
RAB40C-207ENST00000563109 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.55□□□□□ -0.4
RAB40C-207ENST00000563109 TEX43Q6ZNM6 134 aa12.55□□□□□ -0.4
RAB40C-207ENST00000563109 HIST1H2BHQ93079 126 aa12.55□□□□□ -0.4
RAB40C-207ENST00000563109 HIST1H2BNQ99877 126 aa12.55□□□□□ -0.4
RAB40C-207ENST00000563109 HIST1H2BMQ99879 126 aa12.55□□□□□ -0.4
RAB40C-207ENST00000563109 OPRPNQ99935 248 aaPredicted RBP12.55□□□□□ -0.4
RAB40C-207ENST00000563109 C2orf88Q9BSF0 95 aa12.55□□□□□ -0.4
RAB40C-207ENST00000563109 LINC00959A0A1B0GUT2 108 aa12.54□□□□□ -0.4
RAB40C-207ENST00000563109 CCL25O15444 150 aa12.54□□□□□ -0.4
RAB40C-207ENST00000563109 SERF1AO75920 110 aa12.54□□□□□ -0.4
RAB40C-207ENST00000563109 VCX2Q9H322 139 aa12.54□□□□□ -0.4
RAB40C-207ENST00000563109 A0A096LNJ9 63 aa12.53□□□□□ -0.4
RAB40C-207ENST00000563109 TRAV13-1A0A0B4J241 112 aa12.53□□□□□ -0.4
RAB40C-207ENST00000563109 CHCHD10Q8WYQ3 142 aaPredicted RBP12.53□□□□□ -0.4
RAB40C-207ENST00000563109 FRAS1Q86XX4 4008 aa12.52□□□□□ -0.4
RAB40C-207ENST00000563109 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.52□□□□□ -0.41
RAB40C-207ENST00000563109 EREGO14944 169 aa12.52□□□□□ -0.41
RAB40C-207ENST00000563109 TNP2Q05952 138 aa12.52□□□□□ -0.41
RAB40C-207ENST00000563109 FAM104AQ969W3 186 aa12.52□□□□□ -0.41
RAB40C-207ENST00000563109 DNAH2Q9P225 4427 aa12.52□□□□□ -0.41
RAB40C-207ENST00000563109 GAGE12HA6NDE8 117 aa12.51□□□□□ -0.41
RAB40C-207ENST00000563109 ATP5LO75964 103 aa12.51□□□□□ -0.41
RAB40C-207ENST00000563109 XCL1P47992 114 aa12.51□□□□□ -0.41
RAB40C-207ENST00000563109 PDZD11Q5EBL8 140 aa12.5□□□□□ -0.41
RAB40C-207ENST00000563109 AMELXQ99217 191 aa12.5□□□□□ -0.41
RAB40C-207ENST00000563109 LINC00310P59036 64 aa12.49□□□□□ -0.41
RAB40C-207ENST00000563109 KRTAP26-1Q6PEX3 210 aa12.48□□□□□ -0.41
RAB40C-207ENST00000563109 FAM19A2Q8N3H0 131 aa12.48□□□□□ -0.41
RAB40C-207ENST00000563109 BAALCQ8WXS3 180 aa12.48□□□□□ -0.41
RAB40C-207ENST00000563109 DNAH10Q8IVF4 4471 aa12.48□□□□□ -0.41
RAB40C-207ENST00000563109 A0A087WTM6 91 aa12.47□□□□□ -0.41
RAB40C-207ENST00000563109 CD164L2Q6UWJ8 174 aa12.47□□□□□ -0.41
RAB40C-207ENST00000563109 LINC00173Q6ZV60 143 aa12.47□□□□□ -0.41
RAB40C-207ENST00000563109 MAPKAPK5-AS1Q8N8E1 139 aa12.47□□□□□ -0.41
RAB40C-207ENST00000563109 LRCOL1A6NCL2 159 aa12.46□□□□□ -0.41
RAB40C-207ENST00000563109 NDUFA6P56556 154 aa12.46□□□□□ -0.41
RAB40C-207ENST00000563109 FOXI1Q12951 378 aa12.46□□□□□ -0.41
RAB40C-207ENST00000563109 PMVKQ15126 192 aa12.46□□□□□ -0.41
RAB40C-207ENST00000563109 ZC2HC1BQ5TFG8 222 aa12.46□□□□□ -0.41
RAB40C-207ENST00000563109 LECT2O14960 151 aa12.45□□□□□ -0.42
RAB40C-207ENST00000563109 NUPR1O60356 82 aa12.45□□□□□ -0.42
RAB40C-207ENST00000563109 UBE2D1P51668 147 aa12.45□□□□□ -0.42
RAB40C-207ENST00000563109 C14orf177Q52M58 125 aa12.45□□□□□ -0.42
RAB40C-207ENST00000563109 DNAH17Q9UFH2 4485 aa12.44□□□□□ -0.42
RAB40C-207ENST00000563109 USP17L23D6RBM5 183 aa12.44□□□□□ -0.42
RAB40C-207ENST00000563109 LEPROTL1O95214 131 aa12.44□□□□□ -0.42
RAB40C-207ENST00000563109 SEC11AP67812 179 aa12.44□□□□□ -0.42
RAB40C-207ENST00000563109 IFI27L1Q96BM0 104 aa12.44□□□□□ -0.42
RAB40C-207ENST00000563109 HSPB8Q9UJY1 196 aa12.44□□□□□ -0.42
RAB40C-207ENST00000563109 COX7A2LO14548 114 aa12.43□□□□□ -0.42
RAB40C-207ENST00000563109 COA6Q5JTJ3 125 aaKnown RBP12.43□□□□□ -0.42
RAB40C-207ENST00000563109 CFAP161Q6P656 301 aa12.43□□□□□ -0.42
RAB40C-207ENST00000563109 CST9LQ9H4G1 147 aa12.43□□□□□ -0.42
RAB40C-207ENST00000563109 PRSS1P07477 247 aa12.42□□□□□ -0.42
RAB40C-207ENST00000563109 MALP21145 153 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 91.4 ms