RNA–Protein interactions for RNA: ENST00000562601.5

CDH13-206, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-206ENST00000562601 LINC00269Q8N2A0 174 aa3.84□□□□□ -1.79
CDH13-206ENST00000562601 BAALCQ8WXS3 180 aa3.84□□□□□ -1.79
CDH13-206ENST00000562601 TMEM243Q9BU79 118 aa3.84□□□□□ -1.79
CDH13-206ENST00000562601 TMEM191AQ9H0A3 160 aa3.84□□□□□ -1.79
CDH13-206ENST00000562601 IGLV4-60A0A075B6I1 120 aa3.83□□□□□ -1.8
CDH13-206ENST00000562601 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.83□□□□□ -1.8
CDH13-206ENST00000562601 IGKV2-29A2NJV5 120 aaPredicted RBP3.83□□□□□ -1.8
CDH13-206ENST00000562601 SDHAF1A6NFY7 115 aa3.83□□□□□ -1.8
CDH13-206ENST00000562601 UBE2L6O14933 153 aa3.83□□□□□ -1.8
CDH13-206ENST00000562601 CRPP02741 224 aa3.83□□□□□ -1.8
CDH13-206ENST00000562601 ADCYAP1P18509 176 aa3.83□□□□□ -1.8
CDH13-206ENST00000562601 PMCHP20382 165 aa3.83□□□□□ -1.8
CDH13-206ENST00000562601 COTL1Q14019 142 aa3.83□□□□□ -1.8
CDH13-206ENST00000562601 ELOBQ15370 118 aa3.83□□□□□ -1.8
CDH13-206ENST00000562601 MRPL51Q4U2R6 128 aaKnown RBP3.83□□□□□ -1.8
CDH13-206ENST00000562601 COMMD7Q86VX2 200 aa3.83□□□□□ -1.8
CDH13-206ENST00000562601 ST20Q9HBF5 79 aa3.83□□□□□ -1.8
CDH13-206ENST00000562601 TMEM242Q9NWH2 141 aa3.83□□□□□ -1.8
CDH13-206ENST00000562601 IGLV10-54A0A075B6I4 117 aa3.82□□□□□ -1.8
CDH13-206ENST00000562601 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.82□□□□□ -1.8
CDH13-206ENST00000562601 IGLV5-52A0A0A0MRZ9 124 aa3.82□□□□□ -1.8
CDH13-206ENST00000562601 IGKV3OR2-268A0A0C4DH90 116 aa3.82□□□□□ -1.8
CDH13-206ENST00000562601 TMEM218A2RU14 115 aa3.82□□□□□ -1.8
CDH13-206ENST00000562601 F8W036 122 aa3.82□□□□□ -1.8
CDH13-206ENST00000562601 I3L3M4 83 aa3.82□□□□□ -1.8
CDH13-206ENST00000562601 TSHBP01222 138 aa3.82□□□□□ -1.8
CDH13-206ENST00000562601 APCSP02743 223 aa3.82□□□□□ -1.8
CDH13-206ENST00000562601 KRTAP10-1P60331 282 aa3.82□□□□□ -1.8
CDH13-206ENST00000562601 Q0VG73 95 aa3.82□□□□□ -1.8
CDH13-206ENST00000562601 FAM104BQ5XKR9 115 aa3.82□□□□□ -1.8
CDH13-206ENST00000562601 Q8N814 137 aa3.82□□□□□ -1.8
CDH13-206ENST00000562601 C20orf203Q8NBC4 194 aa3.82□□□□□ -1.8
CDH13-206ENST00000562601 FRZBQ92765 325 aa3.82□□□□□ -1.8
CDH13-206ENST00000562601 RMI2Q96E14 147 aa3.82□□□□□ -1.8
CDH13-206ENST00000562601 MRAP2Q96G30 205 aa3.82□□□□□ -1.8
CDH13-206ENST00000562601 CHCHD7Q9BUK0 85 aa3.82□□□□□ -1.8
CDH13-206ENST00000562601 FAT1Q14517 4588 aa3.82□□□□□ -1.8
CDH13-206ENST00000562601 TRBV6-5A0A0K0K1A5 114 aa3.81□□□□□ -1.8
CDH13-206ENST00000562601 A0A1B0GXF2 115 aa3.81□□□□□ -1.8
CDH13-206ENST00000562601 PPP1R2P9O14990 202 aa3.81□□□□□ -1.8
CDH13-206ENST00000562601 HLA-DQA1P01909 254 aa3.81□□□□□ -1.8
CDH13-206ENST00000562601 MT-ND4LP03901 98 aa3.81□□□□□ -1.8
CDH13-206ENST00000562601 VPREB1P12018 145 aa3.81□□□□□ -1.8
CDH13-206ENST00000562601 CKS2P33552 79 aa3.81□□□□□ -1.8
CDH13-206ENST00000562601 POLR2KP53803 58 aaKnown RBP3.81□□□□□ -1.8
CDH13-206ENST00000562601 PKIAP61925 76 aa3.81□□□□□ -1.8
CDH13-206ENST00000562601 HBBP68871 147 aa3.81□□□□□ -1.8
CDH13-206ENST00000562601 HAMPP81172 84 aa3.81□□□□□ -1.8
CDH13-206ENST00000562601 REG3AQ06141 175 aa3.81□□□□□ -1.8
CDH13-206ENST00000562601 LINC01620Q4KN68 170 aa3.81□□□□□ -1.8
CDH13-206ENST00000562601 AMMECR1LQ6DCA0 310 aa3.81□□□□□ -1.8
CDH13-206ENST00000562601 RNASEKQ6P5S7 137 aaKnown RBP3.81□□□□□ -1.8
CDH13-206ENST00000562601 TMEM70Q9BUB7 260 aa3.81□□□□□ -1.8
CDH13-206ENST00000562601 A0A1B0GUV1 79 aa3.8□□□□□ -1.8
CDH13-206ENST00000562601 A0A1B0GW15 77 aa3.8□□□□□ -1.8
CDH13-206ENST00000562601 D6R8Y8 96 aa3.8□□□□□ -1.8
CDH13-206ENST00000562601 VCYO14598 125 aa3.8□□□□□ -1.8
CDH13-206ENST00000562601 FGF6P10767 208 aa3.8□□□□□ -1.8
CDH13-206ENST00000562601 PNRC1Q12796 327 aaPredicted RBP3.8□□□□□ -1.8
CDH13-206ENST00000562601 MIAQ16674 131 aa3.8□□□□□ -1.8
CDH13-206ENST00000562601 UQCC3Q6UW78 93 aa3.8□□□□□ -1.8
CDH13-206ENST00000562601 PRR34Q9NV39 138 aa3.8□□□□□ -1.8
CDH13-206ENST00000562601 VPS13BQ7Z7G8 4022 aa3.79□□□□□ -1.8
CDH13-206ENST00000562601 IGKV2D-30A0A075B6S6 120 aa3.79□□□□□ -1.8
CDH13-206ENST00000562601 TRBV27A0A0K0K1C4 114 aa3.79□□□□□ -1.8
CDH13-206ENST00000562601 LINC00862A6NCI5 91 aa3.79□□□□□ -1.8
CDH13-206ENST00000562601 CDK2AP2O75956 126 aa3.79□□□□□ -1.8
CDH13-206ENST00000562601 NPYP01303 97 aa3.79□□□□□ -1.8
CDH13-206ENST00000562601 S100A8P05109 93 aa3.79□□□□□ -1.8
CDH13-206ENST00000562601 ESDP10768 282 aa3.79□□□□□ -1.8
CDH13-206ENST00000562601 FCER1GP30273 86 aa3.79□□□□□ -1.8
CDH13-206ENST00000562601 RNASE13Q5GAN3 156 aaKnown RBP3.79□□□□□ -1.8
CDH13-206ENST00000562601 KRTAP26-1Q6PEX3 210 aa3.79□□□□□ -1.8
CDH13-206ENST00000562601 LOC389332A0A1B0GUA5 103 aa3.78□□□□□ -1.8
CDH13-206ENST00000562601 C7orf77A4D0Y5 90 aa3.78□□□□□ -1.8
CDH13-206ENST00000562601 TCAPO15273 167 aa3.78□□□□□ -1.8
CDH13-206ENST00000562601 PPP1R17O96001 155 aa3.78□□□□□ -1.8
CDH13-206ENST00000562601 SMR3BP02814 79 aaPredicted RBP3.78□□□□□ -1.8
CDH13-206ENST00000562601 PRSS1P07477 247 aa3.78□□□□□ -1.8
CDH13-206ENST00000562601 XGP55808 180 aa3.78□□□□□ -1.8
CDH13-206ENST00000562601 TMEM136Q6ZRR5 245 aa3.78□□□□□ -1.8
CDH13-206ENST00000562601 ATP5L2Q7Z4Y8 100 aa3.78□□□□□ -1.8
CDH13-206ENST00000562601 OR5A1Q8NGJ0 315 aa3.78□□□□□ -1.8
CDH13-206ENST00000562601 TMEM101Q96IK0 257 aa3.78□□□□□ -1.8
CDH13-206ENST00000562601 PRELID3AQ96N28 172 aa3.78□□□□□ -1.8
CDH13-206ENST00000562601 KIR2DL4Q99706 377 aa3.78□□□□□ -1.8
CDH13-206ENST00000562601 SEC11CQ9BY50 192 aa3.78□□□□□ -1.8
CDH13-206ENST00000562601 TRBV24-1A0A075B6N3 115 aa3.77□□□□□ -1.81
CDH13-206ENST00000562601 TRAV8-4A0A0B4J246 113 aa3.77□□□□□ -1.81
CDH13-206ENST00000562601 A4D1N5 150 aa3.77□□□□□ -1.81
CDH13-206ENST00000562601 H7C423 109 aa3.77□□□□□ -1.81
CDH13-206ENST00000562601 XCL1P47992 114 aa3.77□□□□□ -1.81
CDH13-206ENST00000562601 RPL39P62891 51 aaKnown RBP3.77□□□□□ -1.81
CDH13-206ENST00000562601 KIAA1644Q3SXP7 199 aa3.77□□□□□ -1.81
CDH13-206ENST00000562601 C10orf91Q5T1B1 145 aa3.77□□□□□ -1.81
CDH13-206ENST00000562601 LCE1AQ5T7P2 110 aa3.77□□□□□ -1.81
CDH13-206ENST00000562601 ORMDL3Q8N138 153 aa3.77□□□□□ -1.81
CDH13-206ENST00000562601 ZNF664Q8N3J9 261 aa3.77□□□□□ -1.81
CDH13-206ENST00000562601 CHCHD10Q8WYQ3 142 aaPredicted RBP3.77□□□□□ -1.81
CDH13-206ENST00000562601 BTF3L4Q96K17 158 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms