RNA–Protein interactions for RNA: ENST00000562307.1

CDH13-205, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-205ENST00000562307 MRPS16Q9Y3D3 137 aaKnown RBP6.65□□□□□ -1.34
CDH13-205ENST00000562307 NBEAL1Q6ZS30 2694 aa6.64□□□□□ -1.35
CDH13-205ENST00000562307 FBN3Q75N90 2809 aa6.64□□□□□ -1.35
CDH13-205ENST00000562307 SPATA25Q9BR10 227 aa6.64□□□□□ -1.35
CDH13-205ENST00000562307 IGKV2D-26A0A0A0MRZ7 120 aa6.63□□□□□ -1.35
CDH13-205ENST00000562307 E9PLD3 99 aa6.63□□□□□ -1.35
CDH13-205ENST00000562307 F5H768 121 aa6.63□□□□□ -1.35
CDH13-205ENST00000562307 H3BNG1 76 aa6.63□□□□□ -1.35
CDH13-205ENST00000562307 SIVA1O15304 175 aa6.63□□□□□ -1.35
CDH13-205ENST00000562307 ZNF25P17030 456 aaPredicted RBP6.63□□□□□ -1.35
CDH13-205ENST00000562307 HNRNPA3P51991 378 aaKnown RBP6.63□□□□□ -1.35
CDH13-205ENST00000562307 DGAT2L7PQ6IED9 249 aa6.63□□□□□ -1.35
CDH13-205ENST00000562307 Q6ZUT4 128 aa6.63□□□□□ -1.35
CDH13-205ENST00000562307 SH2D6Q7Z4S9 175 aa6.63□□□□□ -1.35
CDH13-205ENST00000562307 FAM19A3Q7Z5A8 133 aa6.63□□□□□ -1.35
CDH13-205ENST00000562307 CDC42SE2Q9NRR3 84 aa6.63□□□□□ -1.35
CDH13-205ENST00000562307 A0A0J9YXV3 536 aa6.62□□□□□ -1.35
CDH13-205ENST00000562307 TINCRA0A1B0GVN0 87 aa6.62□□□□□ -1.35
CDH13-205ENST00000562307 PRB2P02812 416 aaPredicted RBP6.62□□□□□ -1.35
CDH13-205ENST00000562307 UBE2D1P51668 147 aa6.62□□□□□ -1.35
CDH13-205ENST00000562307 CTAG1AP78358 180 aa6.62□□□□□ -1.35
CDH13-205ENST00000562307 MRPL23Q16540 153 aaKnown RBP6.62□□□□□ -1.35
CDH13-205ENST00000562307 PCP2Q8IVA1 136 aa6.62□□□□□ -1.35
CDH13-205ENST00000562307 NOTCH1P46531 2555 aa6.61□□□□□ -1.35
CDH13-205ENST00000562307 A0A0J9YWU9 116 aa6.61□□□□□ -1.35
CDH13-205ENST00000562307 A0A0J9YY99 117 aa6.61□□□□□ -1.35
CDH13-205ENST00000562307 UBE2L6O14933 153 aa6.61□□□□□ -1.35
CDH13-205ENST00000562307 ZNF22P17026 224 aaPredicted RBP6.61□□□□□ -1.35
CDH13-205ENST00000562307 NMUP48645 174 aa6.61□□□□□ -1.35
CDH13-205ENST00000562307 TIRAPP58753 221 aa6.61□□□□□ -1.35
CDH13-205ENST00000562307 HERVK_113P61574 105 aa6.61□□□□□ -1.35
CDH13-205ENST00000562307 DEFB121Q5J5C9 76 aa6.61□□□□□ -1.35
CDH13-205ENST00000562307 AMMECR1LQ6DCA0 310 aa6.61□□□□□ -1.35
CDH13-205ENST00000562307 C2orf91Q6ZV80 131 aa6.61□□□□□ -1.35
CDH13-205ENST00000562307 OR5A1Q8NGJ0 315 aa6.61□□□□□ -1.35
CDH13-205ENST00000562307 TMEM101Q96IK0 257 aa6.61□□□□□ -1.35
CDH13-205ENST00000562307 C2orf88Q9BSF0 95 aa6.61□□□□□ -1.35
CDH13-205ENST00000562307 CHAC1Q9BUX1 264 aa6.61□□□□□ -1.35
CDH13-205ENST00000562307 A0A096LPF7 62 aa6.6□□□□□ -1.35
CDH13-205ENST00000562307 A0A1B0GUV1 79 aa6.6□□□□□ -1.35
CDH13-205ENST00000562307 TMEM223A0PJW6 202 aa6.6□□□□□ -1.35
CDH13-205ENST00000562307 M0R143 59 aa6.6□□□□□ -1.35
CDH13-205ENST00000562307 HTN3P15516 51 aa6.6□□□□□ -1.35
CDH13-205ENST00000562307 RNASE13Q5GAN3 156 aaKnown RBP6.6□□□□□ -1.35
CDH13-205ENST00000562307 SNHG12Q9BXW3 62 aa6.6□□□□□ -1.35
CDH13-205ENST00000562307 TP73-AS1Q9UF72 201 aa6.6□□□□□ -1.35
CDH13-205ENST00000562307 ICOSQ9Y6W8 199 aa6.6□□□□□ -1.35
CDH13-205ENST00000562307 IGLV5-45A0A087WSX0 123 aa6.59□□□□□ -1.35
CDH13-205ENST00000562307 TCTAP57738 103 aa6.59□□□□□ -1.35
CDH13-205ENST00000562307 SEC11AP67812 179 aa6.59□□□□□ -1.35
CDH13-205ENST00000562307 GAGE6Q13070 117 aa6.59□□□□□ -1.35
CDH13-205ENST00000562307 LBHQ53QV2 105 aaPredicted RBP6.59□□□□□ -1.35
CDH13-205ENST00000562307 TMEM170BQ5T4T1 132 aa6.59□□□□□ -1.35
CDH13-205ENST00000562307 Q6ZTC4 211 aa6.59□□□□□ -1.35
CDH13-205ENST00000562307 MAPKAPK5-AS1Q8N8E1 139 aa6.59□□□□□ -1.35
CDH13-205ENST00000562307 C11orf45Q8TAV5 145 aa6.59□□□□□ -1.35
CDH13-205ENST00000562307 CHCHD5Q9BSY4 110 aa6.59□□□□□ -1.35
CDH13-205ENST00000562307 HIGD1BQ9P298 99 aa6.59□□□□□ -1.35
CDH13-205ENST00000562307 LEPROTO15243 131 aa6.58□□□□□ -1.36
CDH13-205ENST00000562307 LINC00242Q5T6M2 205 aa6.58□□□□□ -1.36
CDH13-205ENST00000562307 MGAM2Q2M2H8 2515 aa6.58□□□□□ -1.36
CDH13-205ENST00000562307 IGLV4-60A0A075B6I1 120 aa6.57□□□□□ -1.36
CDH13-205ENST00000562307 TRAV8-6A0A0B4J262 113 aa6.57□□□□□ -1.36
CDH13-205ENST00000562307 MYMXA0A1B0GTQ4 84 aa6.57□□□□□ -1.36
CDH13-205ENST00000562307 EREGO14944 169 aa6.57□□□□□ -1.36
CDH13-205ENST00000562307 NANOS2P60321 138 aaKnown RBP6.57□□□□□ -1.36
CDH13-205ENST00000562307 HERVK_113P63121 156 aa6.57□□□□□ -1.36
CDH13-205ENST00000562307 LELP1Q5T871 98 aa6.57□□□□□ -1.36
CDH13-205ENST00000562307 MRAPQ8TCY5 172 aa6.57□□□□□ -1.36
CDH13-205ENST00000562307 TTTY13Q9BZ97 58 aa6.57□□□□□ -1.36
CDH13-205ENST00000562307 TENM3Q9P273 2699 aa6.56□□□□□ -1.36
CDH13-205ENST00000562307 J3QQQ9 107 aa6.56□□□□□ -1.36
CDH13-205ENST00000562307 RBX1P62877 108 aa6.56□□□□□ -1.36
CDH13-205ENST00000562307 COX6A2Q02221 97 aa6.56□□□□□ -1.36
CDH13-205ENST00000562307 LYPD5Q6UWN5 251 aa6.56□□□□□ -1.36
CDH13-205ENST00000562307 PLEKHB2Q96CS7 222 aa6.56□□□□□ -1.36
CDH13-205ENST00000562307 GEMIN7Q9H840 131 aaKnown RBP6.56□□□□□ -1.36
CDH13-205ENST00000562307 HUWE1Q7Z6Z7 4374 aaKnown RBP6.55□□□□□ -1.36
CDH13-205ENST00000562307 DEFB131BA0A096LNP1 70 aa6.55□□□□□ -1.36
CDH13-205ENST00000562307 IGHV1-58A0A0C4DH39 117 aa6.55□□□□□ -1.36
CDH13-205ENST00000562307 H3BRM9 83 aa6.55□□□□□ -1.36
CDH13-205ENST00000562307 TSPEAR-AS2P59090 65 aa6.55□□□□□ -1.36
CDH13-205ENST00000562307 MPV17L2Q567V2 206 aa6.55□□□□□ -1.36
CDH13-205ENST00000562307 LINC00469Q8N7U9 141 aa6.55□□□□□ -1.36
CDH13-205ENST00000562307 B9D2Q9BPU9 175 aa6.55□□□□□ -1.36
CDH13-205ENST00000562307 CDKN2A-AS1Q9UH64 79 aa6.55□□□□□ -1.36
CDH13-205ENST00000562307 TRAV10A0A0B4J240 114 aa6.54□□□□□ -1.36
CDH13-205ENST00000562307 TRAV13-1A0A0B4J241 112 aa6.54□□□□□ -1.36
CDH13-205ENST00000562307 IGLV5-39A0A0G2JS06 123 aa6.54□□□□□ -1.36
CDH13-205ENST00000562307 ZNF815PA8K554 130 aa6.54□□□□□ -1.36
CDH13-205ENST00000562307 TMEM262E9PQX1 116 aa6.54□□□□□ -1.36
CDH13-205ENST00000562307 CCL25O15444 150 aa6.54□□□□□ -1.36
CDH13-205ENST00000562307 IGHV3-30-3P0DP02 117 aa6.54□□□□□ -1.36
CDH13-205ENST00000562307 HINT1P49773 126 aaPredicted RBP6.54□□□□□ -1.36
CDH13-205ENST00000562307 HSD52Q0P140 79 aa6.54□□□□□ -1.36
CDH13-205ENST00000562307 BVES-AS1Q5T3Y7 98 aa6.54□□□□□ -1.36
CDH13-205ENST00000562307 DNAH9Q9NYC9 4486 aa6.53□□□□□ -1.36
CDH13-205ENST00000562307 LINC00959A0A1B0GUT2 108 aa6.53□□□□□ -1.36
CDH13-205ENST00000562307 LGALS3P17931 250 aaKnown RBP6.53□□□□□ -1.36
CDH13-205ENST00000562307 TAL2Q16559 108 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms