RNA–Protein interactions for RNA: ENST00000561978.1

PCAT1-202, prostate cancer associated transcript 1, humanhuman

TSL 1 (best) BASIC

Gene PCAT1, Length 1,992 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT1-202ENST00000561978 C11orf72Q8NBR9 251 aa8.42□□□□□ -1.06
PCAT1-202ENST00000561978 CHAC1Q9BUX1 264 aa8.42□□□□□ -1.06
PCAT1-202ENST00000561978 V9GYY9 64 aa8.42□□□□□ -1.06
PCAT1-202ENST00000561978 PRKDCP78527 4128 aaKnown RBP8.41□□□□□ -1.06
PCAT1-202ENST00000561978 TSHBP01222 138 aa8.41□□□□□ -1.06
PCAT1-202ENST00000561978 RPL39P62891 51 aaKnown RBP8.41□□□□□ -1.06
PCAT1-202ENST00000561978 C20orf203Q8NBC4 194 aa8.41□□□□□ -1.06
PCAT1-202ENST00000561978 GAGE10A6NGK3 116 aa8.41□□□□□ -1.06
PCAT1-202ENST00000561978 XP32Q5T750 250 aa8.41□□□□□ -1.06
PCAT1-202ENST00000561978 CFAP126Q5VTH2 177 aa8.41□□□□□ -1.06
PCAT1-202ENST00000561978 OR5A1Q8NGJ0 315 aa8.41□□□□□ -1.06
PCAT1-202ENST00000561978 XCL2Q9UBD3 114 aa8.41□□□□□ -1.06
PCAT1-202ENST00000561978 MYMXA0A1B0GTQ4 84 aa8.4□□□□□ -1.06
PCAT1-202ENST00000561978 IGLV1-51P01701 117 aa8.39□□□□□ -1.07
PCAT1-202ENST00000561978 PRB2P02812 416 aaPredicted RBP8.39□□□□□ -1.07
PCAT1-202ENST00000561978 ZFAND6Q6FIF0 208 aa8.39□□□□□ -1.07
PCAT1-202ENST00000561978 MAPKAPK5-AS1Q8N8E1 139 aa8.39□□□□□ -1.07
PCAT1-202ENST00000561978 TM2D2Q9BX73 214 aa8.39□□□□□ -1.07
PCAT1-202ENST00000561978 TTTY13Q9BZ97 58 aa8.39□□□□□ -1.07
PCAT1-202ENST00000561978 IGHV3-73A0A0B4J1V6 119 aa8.39□□□□□ -1.07
PCAT1-202ENST00000561978 C9orf118A6NHY6 69 aa8.39□□□□□ -1.07
PCAT1-202ENST00000561978 IGHV3-53P01767 116 aa8.39□□□□□ -1.07
PCAT1-202ENST00000561978 SMIM13P0DJ93 91 aa8.39□□□□□ -1.07
PCAT1-202ENST00000561978 P0DMU3 169 aa8.39□□□□□ -1.07
PCAT1-202ENST00000561978 FAM231AP0DMU4 169 aa8.39□□□□□ -1.07
PCAT1-202ENST00000561978 FAM231CP0DMU5 169 aa8.39□□□□□ -1.07
PCAT1-202ENST00000561978 GCSHP23434 173 aa8.39□□□□□ -1.07
PCAT1-202ENST00000561978 CEND1Q8N111 149 aa8.39□□□□□ -1.07
PCAT1-202ENST00000561978 PYGO1Q9Y3Y4 419 aa8.39□□□□□ -1.07
PCAT1-202ENST00000561978 IGLV4-69A0A075B6H9 119 aa8.38□□□□□ -1.07
PCAT1-202ENST00000561978 C11orf86A6NJI1 115 aa8.38□□□□□ -1.07
PCAT1-202ENST00000561978 PRM2P04554 102 aa8.38□□□□□ -1.07
PCAT1-202ENST00000561978 C1orf158Q8N1D5 194 aa8.38□□□□□ -1.07
PCAT1-202ENST00000561978 PRADC1Q9BSG0 188 aa8.38□□□□□ -1.07
PCAT1-202ENST00000561978 NFE4Q86UQ8 179 aa8.37□□□□□ -1.07
PCAT1-202ENST00000561978 DEFB104AQ8WTQ1 72 aa8.37□□□□□ -1.07
PCAT1-202ENST00000561978 KRTAP10-11P60412 298 aa8.37□□□□□ -1.07
PCAT1-202ENST00000561978 C9orf66Q5T8R8 295 aa8.37□□□□□ -1.07
PCAT1-202ENST00000561978 TMEM263Q8WUH6 116 aaKnown RBP8.37□□□□□ -1.07
PCAT1-202ENST00000561978 K7EP34 96 aa8.36□□□□□ -1.07
PCAT1-202ENST00000561978 IL17DQ8TAD2 202 aa8.36□□□□□ -1.07
PCAT1-202ENST00000561978 HIST1H4GQ99525 98 aa8.36□□□□□ -1.07
PCAT1-202ENST00000561978 SPANXCQ9NY87 97 aa8.36□□□□□ -1.07
PCAT1-202ENST00000561978 TGP01266 2768 aa8.36□□□□□ -1.07
PCAT1-202ENST00000561978 IGHV3OR16-12A0A075B7B8 117 aa8.35□□□□□ -1.07
PCAT1-202ENST00000561978 TMEM170BQ5T4T1 132 aa8.35□□□□□ -1.07
PCAT1-202ENST00000561978 IGLV4-3A0A075B6K6 122 aa8.35□□□□□ -1.07
PCAT1-202ENST00000561978 ZNF815PA8K554 130 aa8.35□□□□□ -1.07
PCAT1-202ENST00000561978 Q6ZSN1 163 aa8.35□□□□□ -1.07
PCAT1-202ENST00000561978 TRGV1A0A0A0MS02 117 aa8.34□□□□□ -1.07
PCAT1-202ENST00000561978 INSL3P51460 131 aa8.34□□□□□ -1.07
PCAT1-202ENST00000561978 FXYD2P54710 66 aa8.34□□□□□ -1.07
PCAT1-202ENST00000561978 KPRPQ5T749 579 aaPredicted RBP8.34□□□□□ -1.07
PCAT1-202ENST00000561978 ZNRF2Q8NHG8 242 aa8.34□□□□□ -1.07
PCAT1-202ENST00000561978 TRBV10-1A0A0K0K1A3 114 aa8.33□□□□□ -1.08
PCAT1-202ENST00000561978 TINCRA0A1B0GVN0 87 aa8.33□□□□□ -1.08
PCAT1-202ENST00000561978 A0A1B0GX51 115 aa8.33□□□□□ -1.08
PCAT1-202ENST00000561978 J3KT08 172 aa8.33□□□□□ -1.08
PCAT1-202ENST00000561978 EMP1P54849 157 aa8.33□□□□□ -1.08
PCAT1-202ENST00000561978 EGFEM1PQ0D2K5 195 aa8.33□□□□□ -1.08
PCAT1-202ENST00000561978 DAZ2Q13117 558 aaKnown RBP8.33□□□□□ -1.08
PCAT1-202ENST00000561978 SCGB1D4Q6XE38 83 aa8.33□□□□□ -1.08
PCAT1-202ENST00000561978 Q8N3U1 123 aa8.33□□□□□ -1.08
PCAT1-202ENST00000561978 C16orf74Q96GX8 76 aa8.33□□□□□ -1.08
PCAT1-202ENST00000561978 TRAV4A0A0B4J268 109 aa8.33□□□□□ -1.08
PCAT1-202ENST00000561978 H3BUT2 72 aa8.33□□□□□ -1.08
PCAT1-202ENST00000561978 SPINK8P0C7L1 97 aa8.33□□□□□ -1.08
PCAT1-202ENST00000561978 RAB37Q96AX2 223 aa8.33□□□□□ -1.08
PCAT1-202ENST00000561978 AMELXQ99217 191 aa8.33□□□□□ -1.08
PCAT1-202ENST00000561978 C19orf73Q9NVV2 129 aa8.33□□□□□ -1.08
PCAT1-202ENST00000561978 NACAE9PAV3 2078 aa8.33□□□□□ -1.08
PCAT1-202ENST00000561978 TRBV7-3A0A075B6L6 115 aa8.32□□□□□ -1.08
PCAT1-202ENST00000561978 TEX48A0A1B0GUV7 120 aa8.32□□□□□ -1.08
PCAT1-202ENST00000561978 OPRPNQ99935 248 aaPredicted RBP8.32□□□□□ -1.08
PCAT1-202ENST00000561978 CHCHD7Q9BUK0 85 aa8.31□□□□□ -1.08
PCAT1-202ENST00000561978 NHP2Q9NX24 153 aaKnown RBP8.31□□□□□ -1.08
PCAT1-202ENST00000561978 A0A1W2PPM0 123 aa8.31□□□□□ -1.08
PCAT1-202ENST00000561978 TMEM223A0PJW6 202 aa8.31□□□□□ -1.08
PCAT1-202ENST00000561978 LEPROTO15243 131 aa8.31□□□□□ -1.08
PCAT1-202ENST00000561978 GIG44P09565 113 aaPredicted RBP8.31□□□□□ -1.08
PCAT1-202ENST00000561978 FABP2P12104 132 aa8.31□□□□□ -1.08
PCAT1-202ENST00000561978 LGALS3P17931 250 aaKnown RBP8.31□□□□□ -1.08
PCAT1-202ENST00000561978 RPS28P62857 69 aaKnown RBP8.31□□□□□ -1.08
PCAT1-202ENST00000561978 RPL36AP83881 106 aaKnown RBP8.31□□□□□ -1.08
PCAT1-202ENST00000561978 FAM19A5Q7Z5A7 132 aaPredicted RBP8.31□□□□□ -1.08
PCAT1-202ENST00000561978 RPL36ALQ969Q0 106 aaKnown RBP8.31□□□□□ -1.08
PCAT1-202ENST00000561978 PRO0628Q9UI54 55 aa8.31□□□□□ -1.08
PCAT1-202ENST00000561978 J3QQQ9 107 aa8.3□□□□□ -1.08
PCAT1-202ENST00000561978 RPL35AP18077 110 aaKnown RBP8.3□□□□□ -1.08
PCAT1-202ENST00000561978 MRPS36P82909 103 aaKnown RBP8.3□□□□□ -1.08
PCAT1-202ENST00000561978 SRSF9Q13242 221 aaKnown RBP eCLIP8.3□□□□□ -1.08
PCAT1-202ENST00000561978 DAZ4Q86SG3 579 aaKnown RBP8.3□□□□□ -1.08
PCAT1-202ENST00000561978 PLEKHB2Q96CS7 222 aa8.3□□□□□ -1.08
PCAT1-202ENST00000561978 DAZ3Q9NR90 486 aaKnown RBP8.3□□□□□ -1.08
PCAT1-202ENST00000561978 UBE2D4Q9Y2X8 147 aa8.3□□□□□ -1.08
PCAT1-202ENST00000561978 K7EQD1 137 aa8.3□□□□□ -1.08
PCAT1-202ENST00000561978 RRN3P1Q2M238 152 aa8.3□□□□□ -1.08
PCAT1-202ENST00000561978 C12orf74Q32Q52 190 aa8.3□□□□□ -1.08
PCAT1-202ENST00000561978 Q6ZTI0 123 aa8.3□□□□□ -1.08
PCAT1-202ENST00000561978 OVOL2Q9BRP0 275 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms