RNA–Protein interactions for RNA: ENST00000561749.1

SMPD3-202, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 2

Gene SMPD3, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-202ENST00000561749 MRPL52Q86TS9 123 aaKnown RBP15.41■□□□□ 0.06
SMPD3-202ENST00000561749 TRAV8-4A0A0B4J246 113 aa15.4■□□□□ 0.06
SMPD3-202ENST00000561749 RPL39P62891 51 aaKnown RBP15.4■□□□□ 0.06
SMPD3-202ENST00000561749 DGAT2L7PQ6IED9 249 aa15.4■□□□□ 0.06
SMPD3-202ENST00000561749 GNB1LQ9BYB4 327 aa15.4■□□□□ 0.06
SMPD3-202ENST00000561749 UBE2D4Q9Y2X8 147 aa15.4■□□□□ 0.06
SMPD3-202ENST00000561749 IGLV5-52A0A0A0MRZ9 124 aa15.39■□□□□ 0.05
SMPD3-202ENST00000561749 PRSS47A8MTI9 375 aa15.38■□□□□ 0.05
SMPD3-202ENST00000561749 USP17L23D6RBM5 183 aa15.38■□□□□ 0.05
SMPD3-202ENST00000561749 RAB5AP20339 215 aa15.38■□□□□ 0.05
SMPD3-202ENST00000561749 RNASE13Q5GAN3 156 aaKnown RBP15.38■□□□□ 0.05
SMPD3-202ENST00000561749 TMEM18Q96B42 140 aa15.38■□□□□ 0.05
SMPD3-202ENST00000561749 CDC42SE2Q9NRR3 84 aa15.38■□□□□ 0.05
SMPD3-202ENST00000561749 COX19Q49B96 90 aa15.37■□□□□ 0.05
SMPD3-202ENST00000561749 ZNF664Q8N3J9 261 aa15.37■□□□□ 0.05
SMPD3-202ENST00000561749 Q8N8P6 123 aa15.37■□□□□ 0.05
SMPD3-202ENST00000561749 NTN5Q8WTR8 489 aaPredicted RBP15.37■□□□□ 0.05
SMPD3-202ENST00000561749 MRPL18Q9H0U6 180 aaKnown RBP15.37■□□□□ 0.05
SMPD3-202ENST00000561749 GAGE12HA6NDE8 117 aa15.36■□□□□ 0.05
SMPD3-202ENST00000561749 SMAGPQ0VAQ4 97 aa15.35■□□□□ 0.05
SMPD3-202ENST00000561749 FABP9Q0Z7S8 132 aa15.35■□□□□ 0.05
SMPD3-202ENST00000561749 Q6ZUT4 128 aa15.35■□□□□ 0.05
SMPD3-202ENST00000561749 CHCHD10Q8WYQ3 142 aaPredicted RBP15.35■□□□□ 0.05
SMPD3-202ENST00000561749 MT-ND6P03923 174 aa15.34■□□□□ 0.05
SMPD3-202ENST00000561749 KRTAP10-1P60331 282 aa15.34■□□□□ 0.05
SMPD3-202ENST00000561749 DNAH5Q8TE73 4624 aa15.34■□□□□ 0.05
SMPD3-202ENST00000561749 LINC00959A0A1B0GUT2 108 aa15.33■□□□□ 0.04
SMPD3-202ENST00000561749 GCSHP23434 173 aa15.33■□□□□ 0.04
SMPD3-202ENST00000561749 IFI27P40305 119 aaPredicted RBP15.33■□□□□ 0.04
SMPD3-202ENST00000561749 TIMM21Q9BVV7 248 aa15.33■□□□□ 0.04
SMPD3-202ENST00000561749 CSDC2Q9Y534 153 aaKnown RBP15.33■□□□□ 0.04
SMPD3-202ENST00000561749 OPRPNQ99935 248 aaPredicted RBP15.32■□□□□ 0.04
SMPD3-202ENST00000561749 ALKBH7Q9BT30 221 aaPredicted RBP15.32■□□□□ 0.04
SMPD3-202ENST00000561749 KIAA1109Q2LD37 5005 aa15.31■□□□□ 0.04
SMPD3-202ENST00000561749 XCL1P47992 114 aa15.31■□□□□ 0.04
SMPD3-202ENST00000561749 C14orf177Q52M58 125 aa15.31■□□□□ 0.04
SMPD3-202ENST00000561749 NXT2Q9NPJ8 142 aaKnown RBP15.31■□□□□ 0.04
SMPD3-202ENST00000561749 CCL25O15444 150 aa15.3■□□□□ 0.04
SMPD3-202ENST00000561749 CBLN2Q8IUK8 224 aa15.3■□□□□ 0.04
SMPD3-202ENST00000561749 SPANXA1Q9NS26 97 aa15.3■□□□□ 0.04
SMPD3-202ENST00000561749 TRAPPC1Q9Y5R8 145 aa15.3■□□□□ 0.04
SMPD3-202ENST00000561749 PRSS1P07477 247 aa15.29■□□□□ 0.04
SMPD3-202ENST00000561749 SS18Q15532 418 aa15.29■□□□□ 0.04
SMPD3-202ENST00000561749 LINC01620Q4KN68 170 aa15.29■□□□□ 0.04
SMPD3-202ENST00000561749 FAM104AQ969W3 186 aa15.29■□□□□ 0.04
SMPD3-202ENST00000561749 LRP1BQ9NZR2 4599 aa15.28■□□□□ 0.04
SMPD3-202ENST00000561749 YPEL4Q96NS1 127 aa15.28■□□□□ 0.04
SMPD3-202ENST00000561749 TRAV13-1A0A0B4J241 112 aa15.27■□□□□ 0.04
SMPD3-202ENST00000561749 FOXI1Q12951 378 aa15.27■□□□□ 0.04
SMPD3-202ENST00000561749 ORMDL2Q53FV1 153 aa15.27■□□□□ 0.04
SMPD3-202ENST00000561749 PRSS3P2Q8NHM4 247 aa15.27■□□□□ 0.04
SMPD3-202ENST00000561749 C2orf66Q6UXQ4 117 aa15.26■□□□□ 0.03
SMPD3-202ENST00000561749 CYSLTR1Q9Y271 337 aa15.26■□□□□ 0.03
SMPD3-202ENST00000561749 hDV102S1A0JD36 115 aa15.25■□□□□ 0.03
SMPD3-202ENST00000561749 SMCO4Q9NRQ5 59 aa15.25■□□□□ 0.03
SMPD3-202ENST00000561749 CDK2AP2O75956 126 aa15.24■□□□□ 0.03
SMPD3-202ENST00000561749 MRPS36P82909 103 aaKnown RBP15.24■□□□□ 0.03
SMPD3-202ENST00000561749 C15orf56Q8N910 161 aa15.24■□□□□ 0.03
SMPD3-202ENST00000561749 K7EMI3 77 aa15.23■□□□□ 0.03
SMPD3-202ENST00000561749 IGLV4-3A0A075B6K6 122 aa15.22■□□□□ 0.03
SMPD3-202ENST00000561749 C1orf196B1AJZ1 125 aa15.22■□□□□ 0.03
SMPD3-202ENST00000561749 HIGD2BQ4VC39 106 aa15.22■□□□□ 0.03
SMPD3-202ENST00000561749 CD164L2Q6UWJ8 174 aa15.22■□□□□ 0.03
SMPD3-202ENST00000561749 PYGO1Q9Y3Y4 419 aa15.22■□□□□ 0.03
SMPD3-202ENST00000561749 IFITM10A6NMD0 228 aa15.21■□□□□ 0.03
SMPD3-202ENST00000561749 HAMPP81172 84 aa15.2■□□□□ 0.02
SMPD3-202ENST00000561749 CFAP161Q6P656 301 aa15.2■□□□□ 0.02
SMPD3-202ENST00000561749 FA2HQ7L5A8 372 aa15.2■□□□□ 0.02
SMPD3-202ENST00000561749 ZC2HC1BQ5TFG8 222 aa15.19■□□□□ 0.02
SMPD3-202ENST00000561749 TMEM141Q96I45 108 aa15.19■□□□□ 0.02
SMPD3-202ENST00000561749 FAM30AQ9NZY2 134 aa15.19■□□□□ 0.02
SMPD3-202ENST00000561749 RYR1P21817 5038 aa15.18■□□□□ 0.02
SMPD3-202ENST00000561749 C18orf32Q8TCD1 76 aa15.18■□□□□ 0.02
SMPD3-202ENST00000561749 HERC2O95714 4834 aa15.17■□□□□ 0.02
SMPD3-202ENST00000561749 XGP55808 180 aa15.17■□□□□ 0.02
SMPD3-202ENST00000561749 AP5S1Q9NUS5 200 aa15.17■□□□□ 0.02
SMPD3-202ENST00000561749 LINC01546A6NGU7 62 aa15.16■□□□□ 0.02
SMPD3-202ENST00000561749 IGIPA6NJ69 53 aa15.16■□□□□ 0.02
SMPD3-202ENST00000561749 SLPIP03973 132 aa15.16■□□□□ 0.02
SMPD3-202ENST00000561749 C5orf38Q86SI9 138 aa15.16■□□□□ 0.02
SMPD3-202ENST00000561749 TOMM6Q96B49 74 aa15.16■□□□□ 0.02
SMPD3-202ENST00000561749 APOBP04114 4563 aaKnown RBP15.15■□□□□ 0.02
SMPD3-202ENST00000561749 IGHV1-58A0A0C4DH39 117 aa15.15■□□□□ 0.02
SMPD3-202ENST00000561749 COX7A2LO14548 114 aa15.15■□□□□ 0.02
SMPD3-202ENST00000561749 G0S2P27469 103 aa15.15■□□□□ 0.02
SMPD3-202ENST00000561749 TEX43Q6ZNM6 134 aa15.15■□□□□ 0.02
SMPD3-202ENST00000561749 GVQW2A0A096LPI5 108 aaPredicted RBP15.14■□□□□ 0.01
SMPD3-202ENST00000561749 MALP21145 153 aa15.14■□□□□ 0.01
SMPD3-202ENST00000561749 Q6ZN92 141 aa15.14■□□□□ 0.01
SMPD3-202ENST00000561749 LINC00173Q6ZV60 143 aa15.14■□□□□ 0.01
SMPD3-202ENST00000561749 LINC00526Q96FQ7 95 aa15.14■□□□□ 0.01
SMPD3-202ENST00000561749 URB1-AS1Q96HZ7 61 aa15.14■□□□□ 0.01
SMPD3-202ENST00000561749 KRTAP17-1Q9BYP8 105 aa15.14■□□□□ 0.01
SMPD3-202ENST00000561749 C9orf163Q8N9P6 203 aa15.13■□□□□ 0.01
SMPD3-202ENST00000561749 SCGB3A1Q96QR1 104 aa15.13■□□□□ 0.01
SMPD3-202ENST00000561749 CNBPP62633 177 aaKnown RBP15.12■□□□□ 0.01
SMPD3-202ENST00000561749 VCX2Q9H322 139 aa15.12■□□□□ 0.01
SMPD3-202ENST00000561749 AMELXQ99217 191 aa15.11■□□□□ 0.01
SMPD3-202ENST00000561749 TIMM17AQ99595 171 aa15.11■□□□□ 0.01
SMPD3-202ENST00000561749 C2orf88Q9BSF0 95 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms