RNA–Protein interactions for RNA: ENST00000561638.1

TMEM249-201, Transcript of transmembrane protein 249, humanhuman

TSL 2

Gene TMEM249, Length 1,762 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM249-201ENST00000561638 RPL32P62910 135 aaKnown RBP16.08■□□□□ 0.17
TMEM249-201ENST00000561638 PRSS3P2Q8NHM4 247 aa16.08■□□□□ 0.17
TMEM249-201ENST00000561638 NXT2Q9NPJ8 142 aaKnown RBP16.08■□□□□ 0.16
TMEM249-201ENST00000561638 TRBV6-8A0A0A6YYG3 113 aa16.07■□□□□ 0.16
TMEM249-201ENST00000561638 BVES-AS1Q5T3Y7 98 aa16.07■□□□□ 0.16
TMEM249-201ENST00000561638 C18orf32Q8TCD1 76 aa16.07■□□□□ 0.16
TMEM249-201ENST00000561638 TRBV25-1A0A075B6N4 114 aa16.06■□□□□ 0.16
TMEM249-201ENST00000561638 PRSS47A8MTI9 375 aa16.06■□□□□ 0.16
TMEM249-201ENST00000561638 IFI27P40305 119 aaPredicted RBP16.06■□□□□ 0.16
TMEM249-201ENST00000561638 TIRAPP58753 221 aa16.06■□□□□ 0.16
TMEM249-201ENST00000561638 A0A1B0GV72 72 aa16.05■□□□□ 0.16
TMEM249-201ENST00000561638 LELP1Q5T871 98 aa16.05■□□□□ 0.16
TMEM249-201ENST00000561638 Q8N8P6 123 aa16.05■□□□□ 0.16
TMEM249-201ENST00000561638 CHCHD1Q96BP2 118 aaKnown RBP16.05■□□□□ 0.16
TMEM249-201ENST00000561638 LINC00588Q9Y4M8 146 aa16.05■□□□□ 0.16
TMEM249-201ENST00000561638 IGHV1-24A0A0C4DH33 117 aa16.05■□□□□ 0.16
TMEM249-201ENST00000561638 GAGE10A6NGK3 116 aa16.05■□□□□ 0.16
TMEM249-201ENST00000561638 TSHBP01222 138 aa16.05■□□□□ 0.16
TMEM249-201ENST00000561638 NTM-AS1Q6ZSK4 140 aa16.05■□□□□ 0.16
TMEM249-201ENST00000561638 OR5A1Q8NGJ0 315 aa16.05■□□□□ 0.16
TMEM249-201ENST00000561638 DYNC2H1Q8NCM8 4307 aaKnown RBP16.04■□□□□ 0.16
TMEM249-201ENST00000561638 TRAV8-6A0A0B4J262 113 aa16.04■□□□□ 0.16
TMEM249-201ENST00000561638 A6NDN8 102 aa16.04■□□□□ 0.16
TMEM249-201ENST00000561638 MAJINQ3KP22 176 aa16.03■□□□□ 0.16
TMEM249-201ENST00000561638 AMMECR1LQ6DCA0 310 aa16.03■□□□□ 0.16
TMEM249-201ENST00000561638 FA2HQ7L5A8 372 aa16.03■□□□□ 0.16
TMEM249-201ENST00000561638 CHCHD5Q9BSY4 110 aa16.03■□□□□ 0.16
TMEM249-201ENST00000561638 IGLV2-18A0A075B6J9 118 aa16.02■□□□□ 0.15
TMEM249-201ENST00000561638 MPV17L2Q567V2 206 aa16.02■□□□□ 0.15
TMEM249-201ENST00000561638 TMEM243Q9BU79 118 aa16.02■□□□□ 0.15
TMEM249-201ENST00000561638 UBE2L6O14933 153 aa16■□□□□ 0.15
TMEM249-201ENST00000561638 MTURNQ8N3F0 131 aa16■□□□□ 0.15
TMEM249-201ENST00000561638 RNASEKQ6P5S7 137 aaKnown RBP16■□□□□ 0.15
TMEM249-201ENST00000561638 J3QR89 54 aa15.99■□□□□ 0.15
TMEM249-201ENST00000561638 K7EMI3 77 aa15.99■□□□□ 0.15
TMEM249-201ENST00000561638 LAGE3Q14657 143 aa15.99■□□□□ 0.15
TMEM249-201ENST00000561638 WFDC10BQ8IUB3 73 aa15.99■□□□□ 0.15
TMEM249-201ENST00000561638 TMEM262E9PQX1 116 aa15.98■□□□□ 0.15
TMEM249-201ENST00000561638 ORMDL2Q53FV1 153 aa15.98■□□□□ 0.15
TMEM249-201ENST00000561638 AP5S1Q9NUS5 200 aa15.98■□□□□ 0.15
TMEM249-201ENST00000561638 HSPB8Q9UJY1 196 aa15.98■□□□□ 0.15
TMEM249-201ENST00000561638 PLECQ15149 4684 aaKnown RBP15.98■□□□□ 0.15
TMEM249-201ENST00000561638 MAP1LC3CQ9BXW4 147 aa15.98■□□□□ 0.15
TMEM249-201ENST00000561638 IGKV2D-29A0A075B6S2 120 aaPredicted RBP15.97■□□□□ 0.15
TMEM249-201ENST00000561638 IGKV2-29A2NJV5 120 aaPredicted RBP15.97■□□□□ 0.15
TMEM249-201ENST00000561638 H3BRM9 83 aa15.97■□□□□ 0.15
TMEM249-201ENST00000561638 LGALS9CQ6DKI2 356 aa15.97■□□□□ 0.15
TMEM249-201ENST00000561638 UPK3BQ9BT76 320 aa15.97■□□□□ 0.15
TMEM249-201ENST00000561638 CHCHD7Q9BUK0 85 aa15.97■□□□□ 0.15
TMEM249-201ENST00000561638 LY6G6CO95867 125 aa15.96■□□□□ 0.15
TMEM249-201ENST00000561638 GAGE6Q13070 117 aa15.96■□□□□ 0.15
TMEM249-201ENST00000561638 ATOH7Q8N100 152 aa15.96■□□□□ 0.15
TMEM249-201ENST00000561638 FAM19A2Q8N3H0 131 aa15.96■□□□□ 0.15
TMEM249-201ENST00000561638 A0A087WX48 190 aa15.95■□□□□ 0.14
TMEM249-201ENST00000561638 SIVA1O15304 175 aa15.95■□□□□ 0.14
TMEM249-201ENST00000561638 LYSTQ99698 3801 aa15.95■□□□□ 0.14
TMEM249-201ENST00000561638 SYS1-DBNDD2H3BUS1 97 aa15.94■□□□□ 0.14
TMEM249-201ENST00000561638 Q6ZVH6 145 aa15.94■□□□□ 0.14
TMEM249-201ENST00000561638 LINC00476Q8WZB0 136 aa15.94■□□□□ 0.14
TMEM249-201ENST00000561638 Q9H8V8 135 aa15.94■□□□□ 0.14
TMEM249-201ENST00000561638 K7EP34 96 aa15.93■□□□□ 0.14
TMEM249-201ENST00000561638 LEPROTL1O95214 131 aa15.93■□□□□ 0.14
TMEM249-201ENST00000561638 C20orf203Q8NBC4 194 aa15.93■□□□□ 0.14
TMEM249-201ENST00000561638 C9orf118A6NHY6 69 aa15.92■□□□□ 0.14
TMEM249-201ENST00000561638 URB1-AS1Q96HZ7 61 aa15.92■□□□□ 0.14
TMEM249-201ENST00000561638 LINC01546A6NGU7 62 aa15.91■□□□□ 0.14
TMEM249-201ENST00000561638 H7C423 109 aa15.91■□□□□ 0.14
TMEM249-201ENST00000561638 IGHV3-30P01768 117 aa15.9■□□□□ 0.14
TMEM249-201ENST00000561638 IGHV3-33P01772 117 aa15.9■□□□□ 0.14
TMEM249-201ENST00000561638 IGHV3-30-3P0DP02 117 aa15.9■□□□□ 0.14
TMEM249-201ENST00000561638 IGHV3-30-5P0DP03 117 aa15.9■□□□□ 0.14
TMEM249-201ENST00000561638 RPL39P62891 51 aaKnown RBP15.9■□□□□ 0.14
TMEM249-201ENST00000561638 CYSLTR1Q9Y271 337 aa15.9■□□□□ 0.14
TMEM249-201ENST00000561638 COX8AP10176 69 aa15.9■□□□□ 0.14
TMEM249-201ENST00000561638 FGF6P10767 208 aa15.9■□□□□ 0.14
TMEM249-201ENST00000561638 C2orf66Q6UXQ4 117 aa15.9■□□□□ 0.14
TMEM249-201ENST00000561638 SMAGPQ0VAQ4 97 aa15.89■□□□□ 0.13
TMEM249-201ENST00000561638 Q8N3U1 123 aa15.89■□□□□ 0.13
TMEM249-201ENST00000561638 DNAH10OSP0CZ25 163 aa15.88■□□□□ 0.13
TMEM249-201ENST00000561638 LINC01556Q5JQF7 62 aa15.88■□□□□ 0.13
TMEM249-201ENST00000561638 DGAT2L7PQ6IED9 249 aa15.88■□□□□ 0.13
TMEM249-201ENST00000561638 SIGMAR1Q99720 223 aa15.88■□□□□ 0.13
TMEM249-201ENST00000561638 TMEM101Q96IK0 257 aa15.87■□□□□ 0.13
TMEM249-201ENST00000561638 HSD52Q0P140 79 aa15.86■□□□□ 0.13
TMEM249-201ENST00000561638 HBDP02042 147 aa15.85■□□□□ 0.13
TMEM249-201ENST00000561638 SPATA12Q7Z6I5 190 aa15.85■□□□□ 0.13
TMEM249-201ENST00000561638 UBE2D4Q9Y2X8 147 aa15.85■□□□□ 0.13
TMEM249-201ENST00000561638 ANGP03950 147 aaKnown RBP15.85■□□□□ 0.13
TMEM249-201ENST00000561638 A0A1B0GUV1 79 aa15.84■□□□□ 0.13
TMEM249-201ENST00000561638 TOMM6Q96B49 74 aa15.84■□□□□ 0.13
TMEM249-201ENST00000561638 SPANXA1Q9NS26 97 aa15.84■□□□□ 0.13
TMEM249-201ENST00000561638 LINC01549A6NIU2 74 aa15.82■□□□□ 0.12
TMEM249-201ENST00000561638 FABP2P12104 132 aa15.82■□□□□ 0.12
TMEM249-201ENST00000561638 KLK12Q9UKR0 248 aa15.82■□□□□ 0.12
TMEM249-201ENST00000561638 IGLV4-60A0A075B6I1 120 aa15.82■□□□□ 0.12
TMEM249-201ENST00000561638 C10orf126Q8N4M7 172 aa15.82■□□□□ 0.12
TMEM249-201ENST00000561638 SCGB3A1Q96QR1 104 aa15.82■□□□□ 0.12
TMEM249-201ENST00000561638 TIMM21Q9BVV7 248 aa15.82■□□□□ 0.12
TMEM249-201ENST00000561638 TTC32Q5I0X7 151 aa15.81■□□□□ 0.12
TMEM249-201ENST00000561638 LINC01545Q5VT33 79 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms