RNA–Protein interactions for RNA: ENST00000560962.5

USP3-AS1-208, USP3 antisense RNA 1, humanhuman

TSL 2

Gene USP3-AS1, Length 1,807 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-AS1-208ENST00000560962 TMEM243Q9BU79 118 aa12.46□□□□□ -0.42
USP3-AS1-208ENST00000560962 A0A096LPF7 62 aa12.45□□□□□ -0.42
USP3-AS1-208ENST00000560962 CTAG1AP78358 180 aa12.45□□□□□ -0.42
USP3-AS1-208ENST00000560962 ATP6V0E2Q8NHE4 81 aa12.45□□□□□ -0.42
USP3-AS1-208ENST00000560962 MRAPQ8TCY5 172 aa12.45□□□□□ -0.42
USP3-AS1-208ENST00000560962 TRBV25-1A0A075B6N4 114 aa12.44□□□□□ -0.42
USP3-AS1-208ENST00000560962 FGF6P10767 208 aa12.44□□□□□ -0.42
USP3-AS1-208ENST00000560962 TRAV26-1A0A087WT03 109 aa12.44□□□□□ -0.42
USP3-AS1-208ENST00000560962 A0A0J9YWU9 116 aa12.44□□□□□ -0.42
USP3-AS1-208ENST00000560962 UBE2L6O14933 153 aa12.44□□□□□ -0.42
USP3-AS1-208ENST00000560962 NPSP0C0P6 89 aa12.44□□□□□ -0.42
USP3-AS1-208ENST00000560962 PCP2Q8IVA1 136 aa12.44□□□□□ -0.42
USP3-AS1-208ENST00000560962 TIMM21Q9BVV7 248 aa12.44□□□□□ -0.42
USP3-AS1-208ENST00000560962 TRBV6-8A0A0A6YYG3 113 aa12.43□□□□□ -0.42
USP3-AS1-208ENST00000560962 A0A0J9YXV3 536 aa12.43□□□□□ -0.42
USP3-AS1-208ENST00000560962 TTTY13Q9BZ97 58 aa12.42□□□□□ -0.42
USP3-AS1-208ENST00000560962 MRPS36P82909 103 aaKnown RBP12.41□□□□□ -0.42
USP3-AS1-208ENST00000560962 GAGE6Q13070 117 aa12.41□□□□□ -0.42
USP3-AS1-208ENST00000560962 TMEM170BQ5T4T1 132 aa12.41□□□□□ -0.42
USP3-AS1-208ENST00000560962 AMMECR1LQ6DCA0 310 aa12.41□□□□□ -0.42
USP3-AS1-208ENST00000560962 CHAC1Q9BUX1 264 aa12.41□□□□□ -0.42
USP3-AS1-208ENST00000560962 DNHD1Q96M86 4753 aa12.41□□□□□ -0.42
USP3-AS1-208ENST00000560962 MRPL52Q86TS9 123 aaKnown RBP12.41□□□□□ -0.42
USP3-AS1-208ENST00000560962 NFE4Q86UQ8 179 aa12.41□□□□□ -0.42
USP3-AS1-208ENST00000560962 TENM3Q9P273 2699 aa12.41□□□□□ -0.42
USP3-AS1-208ENST00000560962 BOD1L2Q8IYS8 172 aa12.4□□□□□ -0.42
USP3-AS1-208ENST00000560962 CHCHD5Q9BSY4 110 aa12.4□□□□□ -0.42
USP3-AS1-208ENST00000560962 TMEM97Q5BJF2 176 aa12.39□□□□□ -0.43
USP3-AS1-208ENST00000560962 C2orf88Q9BSF0 95 aa12.39□□□□□ -0.43
USP3-AS1-208ENST00000560962 MRPS16Q9Y3D3 137 aaKnown RBP12.39□□□□□ -0.43
USP3-AS1-208ENST00000560962 TRAV8-6A0A0B4J262 113 aa12.39□□□□□ -0.43
USP3-AS1-208ENST00000560962 OR5A1Q8NGJ0 315 aa12.39□□□□□ -0.43
USP3-AS1-208ENST00000560962 SNHG12Q9BXW3 62 aa12.39□□□□□ -0.43
USP3-AS1-208ENST00000560962 CSDC2Q9Y534 153 aaKnown RBP12.39□□□□□ -0.43
USP3-AS1-208ENST00000560962 EREGO14944 169 aa12.38□□□□□ -0.43
USP3-AS1-208ENST00000560962 SMAGPQ0VAQ4 97 aa12.38□□□□□ -0.43
USP3-AS1-208ENST00000560962 Q6ZTC4 211 aa12.38□□□□□ -0.43
USP3-AS1-208ENST00000560962 C11orf45Q8TAV5 145 aa12.38□□□□□ -0.43
USP3-AS1-208ENST00000560962 TMEM101Q96IK0 257 aa12.38□□□□□ -0.43
USP3-AS1-208ENST00000560962 H7C423 109 aa12.37□□□□□ -0.43
USP3-AS1-208ENST00000560962 MAPKAPK5-AS1Q8N8E1 139 aa12.37□□□□□ -0.43
USP3-AS1-208ENST00000560962 CDC42SE2Q9NRR3 84 aa12.37□□□□□ -0.43
USP3-AS1-208ENST00000560962 E9PLD3 99 aa12.37□□□□□ -0.43
USP3-AS1-208ENST00000560962 M0R143 59 aa12.37□□□□□ -0.43
USP3-AS1-208ENST00000560962 ZNF22P17026 224 aaPredicted RBP12.37□□□□□ -0.43
USP3-AS1-208ENST00000560962 C2orf91Q6ZV80 131 aa12.37□□□□□ -0.43
USP3-AS1-208ENST00000560962 DLEU1O43261 78 aa12.36□□□□□ -0.43
USP3-AS1-208ENST00000560962 UBE2D1P51668 147 aa12.36□□□□□ -0.43
USP3-AS1-208ENST00000560962 NANOS2P60321 138 aaKnown RBP12.36□□□□□ -0.43
USP3-AS1-208ENST00000560962 HERVK_113P61574 105 aa12.36□□□□□ -0.43
USP3-AS1-208ENST00000560962 BATFQ16520 125 aa12.36□□□□□ -0.43
USP3-AS1-208ENST00000560962 B9D2Q9BPU9 175 aa12.36□□□□□ -0.43
USP3-AS1-208ENST00000560962 MRPL23Q16540 153 aaKnown RBP12.35□□□□□ -0.43
USP3-AS1-208ENST00000560962 ICOSQ9Y6W8 199 aa12.35□□□□□ -0.43
USP3-AS1-208ENST00000560962 TINCRA0A1B0GVN0 87 aa12.34□□□□□ -0.43
USP3-AS1-208ENST00000560962 HUWE1Q7Z6Z7 4374 aaKnown RBP12.34□□□□□ -0.43
USP3-AS1-208ENST00000560962 IGLV4-60A0A075B6I1 120 aa12.34□□□□□ -0.43
USP3-AS1-208ENST00000560962 TMEM223A0PJW6 202 aa12.34□□□□□ -0.43
USP3-AS1-208ENST00000560962 H3BNG1 76 aa12.34□□□□□ -0.43
USP3-AS1-208ENST00000560962 HINT1P49773 126 aaPredicted RBP12.34□□□□□ -0.43
USP3-AS1-208ENST00000560962 TRAV13-1A0A0B4J241 112 aa12.33□□□□□ -0.44
USP3-AS1-208ENST00000560962 TMEM262E9PQX1 116 aa12.33□□□□□ -0.44
USP3-AS1-208ENST00000560962 ZNF25P17030 456 aaPredicted RBP12.33□□□□□ -0.44
USP3-AS1-208ENST00000560962 SH2D6Q7Z4S9 175 aa12.33□□□□□ -0.44
USP3-AS1-208ENST00000560962 IGHV3-64A0A075B6Q5 118 aa12.32□□□□□ -0.44
USP3-AS1-208ENST00000560962 GEMIN7Q9H840 131 aaKnown RBP12.32□□□□□ -0.44
USP3-AS1-208ENST00000560962 COX6A2Q02221 97 aa12.31□□□□□ -0.44
USP3-AS1-208ENST00000560962 LINC00469Q8N7U9 141 aa12.31□□□□□ -0.44
USP3-AS1-208ENST00000560962 IGKV3OR2-268A0A0C4DH90 116 aa12.3□□□□□ -0.44
USP3-AS1-208ENST00000560962 SIVA1O15304 175 aa12.3□□□□□ -0.44
USP3-AS1-208ENST00000560962 MPV17L2Q567V2 206 aa12.3□□□□□ -0.44
USP3-AS1-208ENST00000560962 LINC00242Q5T6M2 205 aa12.3□□□□□ -0.44
USP3-AS1-208ENST00000560962 DEFB131BA0A096LNP1 70 aa12.3□□□□□ -0.44
USP3-AS1-208ENST00000560962 MYMXA0A1B0GTQ4 84 aa12.3□□□□□ -0.44
USP3-AS1-208ENST00000560962 TIRAPP58753 221 aa12.3□□□□□ -0.44
USP3-AS1-208ENST00000560962 TSPEAR-AS2P59090 65 aa12.3□□□□□ -0.44
USP3-AS1-208ENST00000560962 ZNF815PA8K554 130 aa12.28□□□□□ -0.44
USP3-AS1-208ENST00000560962 LEPROTO15243 131 aa12.28□□□□□ -0.44
USP3-AS1-208ENST00000560962 RBX1P62877 108 aa12.28□□□□□ -0.44
USP3-AS1-208ENST00000560962 CDKN2A-AS1Q9UH64 79 aa12.28□□□□□ -0.44
USP3-AS1-208ENST00000560962 TRAV8-3A0A0A6YYJ7 113 aa12.27□□□□□ -0.44
USP3-AS1-208ENST00000560962 SPINK8P0C7L1 97 aa12.27□□□□□ -0.44
USP3-AS1-208ENST00000560962 DNAH9Q9NYC9 4486 aa12.27□□□□□ -0.44
USP3-AS1-208ENST00000560962 J3QQQ9 107 aa12.27□□□□□ -0.45
USP3-AS1-208ENST00000560962 FAM19A3Q7Z5A8 133 aa12.27□□□□□ -0.45
USP3-AS1-208ENST00000560962 TRAV10A0A0B4J240 114 aa12.26□□□□□ -0.45
USP3-AS1-208ENST00000560962 A0A1B0GUV1 79 aa12.26□□□□□ -0.45
USP3-AS1-208ENST00000560962 LGALS3P17931 250 aaKnown RBP12.26□□□□□ -0.45
USP3-AS1-208ENST00000560962 HERVK_113P63121 156 aa12.26□□□□□ -0.45
USP3-AS1-208ENST00000560962 IGLV5-45A0A087WSX0 123 aa12.25□□□□□ -0.45
USP3-AS1-208ENST00000560962 NHLRC4P0CG21 123 aaPredicted RBP12.25□□□□□ -0.45
USP3-AS1-208ENST00000560962 SEC11AP67812 179 aa12.25□□□□□ -0.45
USP3-AS1-208ENST00000560962 LELP1Q5T871 98 aa12.25□□□□□ -0.45
USP3-AS1-208ENST00000560962 LYPD5Q6UWN5 251 aa12.25□□□□□ -0.45
USP3-AS1-208ENST00000560962 Q8N3U1 123 aa12.25□□□□□ -0.45
USP3-AS1-208ENST00000560962 HIGD1BQ9P298 99 aa12.25□□□□□ -0.45
USP3-AS1-208ENST00000560962 IGHV3-30-3P0DP02 117 aa12.25□□□□□ -0.45
USP3-AS1-208ENST00000560962 BVES-AS1Q5T3Y7 98 aa12.25□□□□□ -0.45
USP3-AS1-208ENST00000560962 PLEKHB2Q96CS7 222 aa12.25□□□□□ -0.45
USP3-AS1-208ENST00000560962 H3BRM9 83 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms