RNA–Protein interactions for RNA: ENST00000560721.6

ZEB1-219, Transcript of zinc finger E-box binding homeobox 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ZEB1, Length 3,368 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-219ENST00000560721 ZNF876PQ49A33 203 aa3.85□□□□□ -1.79
ZEB1-219ENST00000560721 HRCT1Q6UXD1 115 aa3.85□□□□□ -1.79
ZEB1-219ENST00000560721 NFE4Q86UQ8 179 aa3.85□□□□□ -1.79
ZEB1-219ENST00000560721 SLC25A29Q8N8R3 303 aa3.85□□□□□ -1.79
ZEB1-219ENST00000560721 NSD1Q96L73 2696 aaPredicted RBP3.85□□□□□ -1.79
ZEB1-219ENST00000560721 PTPN13Q12923 2485 aa3.85□□□□□ -1.79
ZEB1-219ENST00000560721 IGHV3-53P01767 116 aa3.85□□□□□ -1.79
ZEB1-219ENST00000560721 NSUN5P1Q3KNT7 163 aa3.85□□□□□ -1.79
ZEB1-219ENST00000560721 C14orf178Q8N769 122 aaPredicted RBP3.85□□□□□ -1.79
ZEB1-219ENST00000560721 PLEKHB2Q96CS7 222 aa3.85□□□□□ -1.79
ZEB1-219ENST00000560721 CYSLTR1Q9Y271 337 aa3.85□□□□□ -1.79
ZEB1-219ENST00000560721 PHLDA3Q9Y5J5 127 aa3.85□□□□□ -1.79
ZEB1-219ENST00000560721 LOC100131303A0A0U1RQF7 123 aa3.85□□□□□ -1.79
ZEB1-219ENST00000560721 RPL11P62913 178 aaKnown RBP3.85□□□□□ -1.79
ZEB1-219ENST00000560721 PMVKQ15126 192 aa3.85□□□□□ -1.79
ZEB1-219ENST00000560721 MDFIQ99750 246 aa3.85□□□□□ -1.79
ZEB1-219ENST00000560721 ZNF815PA8K554 130 aa3.84□□□□□ -1.79
ZEB1-219ENST00000560721 VPREB1P12018 145 aa3.84□□□□□ -1.79
ZEB1-219ENST00000560721 IGHV3OR16-13A0A075B7E8 117 aa3.84□□□□□ -1.79
ZEB1-219ENST00000560721 IGHV3-74A0A0B4J1X5 117 aa3.84□□□□□ -1.79
ZEB1-219ENST00000560721 GNRH2O43555 120 aa3.84□□□□□ -1.79
ZEB1-219ENST00000560721 APOMO95445 188 aa3.84□□□□□ -1.79
ZEB1-219ENST00000560721 CFC1BP0CG36 223 aa3.84□□□□□ -1.79
ZEB1-219ENST00000560721 CFC1P0CG37 223 aa3.84□□□□□ -1.79
ZEB1-219ENST00000560721 RNASE4P34096 147 aaKnown RBP3.84□□□□□ -1.79
ZEB1-219ENST00000560721 ZNRF2Q8NHG8 242 aa3.84□□□□□ -1.79
ZEB1-219ENST00000560721 FAT2Q9NYQ8 4349 aa3.84□□□□□ -1.8
ZEB1-219ENST00000560721 A0A1B0GUV1 79 aa3.83□□□□□ -1.8
ZEB1-219ENST00000560721 GAGE5Q13069 117 aa3.83□□□□□ -1.8
ZEB1-219ENST00000560721 GAGE6Q13070 117 aa3.83□□□□□ -1.8
ZEB1-219ENST00000560721 MRPL16Q9NX20 251 aaKnown RBP3.83□□□□□ -1.8
ZEB1-219ENST00000560721 CELSR1Q9NYQ6 3014 aa3.83□□□□□ -1.8
ZEB1-219ENST00000560721 ABCA12Q86UK0 2595 aa3.83□□□□□ -1.8
ZEB1-219ENST00000560721 IGHV3-49A0A0A0MS15 119 aa3.83□□□□□ -1.8
ZEB1-219ENST00000560721 IGHV4-30-4P0DP06 118 aa3.83□□□□□ -1.8
ZEB1-219ENST00000560721 TSPEAR-AS2P59090 65 aa3.83□□□□□ -1.8
ZEB1-219ENST00000560721 SUMO4Q6EEV6 95 aa3.83□□□□□ -1.8
ZEB1-219ENST00000560721 TEN1Q86WV5 123 aa3.83□□□□□ -1.8
ZEB1-219ENST00000560721 C10orf126Q8N4M7 172 aa3.83□□□□□ -1.8
ZEB1-219ENST00000560721 NUPR2A6NF83 97 aa3.83□□□□□ -1.8
ZEB1-219ENST00000560721 S100A4P26447 101 aaKnown RBP3.83□□□□□ -1.8
ZEB1-219ENST00000560721 XGP55808 180 aa3.83□□□□□ -1.8
ZEB1-219ENST00000560721 MEIG1Q5JSS6 88 aa3.83□□□□□ -1.8
ZEB1-219ENST00000560721 CARD19Q96LW7 228 aa3.83□□□□□ -1.8
ZEB1-219ENST00000560721 MDFICQ9P1T7 246 aa3.83□□□□□ -1.8
ZEB1-219ENST00000560721 HUWE1Q7Z6Z7 4374 aaKnown RBP3.82□□□□□ -1.8
ZEB1-219ENST00000560721 TMEM223A0PJW6 202 aa3.82□□□□□ -1.8
ZEB1-219ENST00000560721 EIF4EBP3O60516 100 aaPredicted RBP3.82□□□□□ -1.8
ZEB1-219ENST00000560721 TCL1BO95988 128 aa3.82□□□□□ -1.8
ZEB1-219ENST00000560721 HERVK_113P61574 105 aa3.82□□□□□ -1.8
ZEB1-219ENST00000560721 CIRBPQ14011 172 aaKnown RBP3.82□□□□□ -1.8
ZEB1-219ENST00000560721 DAZ4Q86SG3 579 aaKnown RBP3.82□□□□□ -1.8
ZEB1-219ENST00000560721 DAZ3Q9NR90 486 aaKnown RBP3.82□□□□□ -1.8
ZEB1-219ENST00000560721 A0A0B4J2C4 111 aa3.82□□□□□ -1.8
ZEB1-219ENST00000560721 CCDC179H3BU77 68 aa3.82□□□□□ -1.8
ZEB1-219ENST00000560721 M0QY20 66 aa3.82□□□□□ -1.8
ZEB1-219ENST00000560721 P0DMU3 169 aa3.82□□□□□ -1.8
ZEB1-219ENST00000560721 FAM231AP0DMU4 169 aa3.82□□□□□ -1.8
ZEB1-219ENST00000560721 FAM231CP0DMU5 169 aa3.82□□□□□ -1.8
ZEB1-219ENST00000560721 PPDPFLQ8WWR9 84 aa3.82□□□□□ -1.8
ZEB1-219ENST00000560721 KIR2DL4Q99706 377 aa3.82□□□□□ -1.8
ZEB1-219ENST00000560721 SDHAF1A6NFY7 115 aa3.82□□□□□ -1.8
ZEB1-219ENST00000560721 LEPROTO15243 131 aa3.82□□□□□ -1.8
ZEB1-219ENST00000560721 RBMY1A1P0DJD3 496 aaKnown RBP3.82□□□□□ -1.8
ZEB1-219ENST00000560721 RBMY1CP0DJD4 496 aa3.82□□□□□ -1.8
ZEB1-219ENST00000560721 RBMY1FQ15415 496 aaKnown RBP3.82□□□□□ -1.8
ZEB1-219ENST00000560721 MRAPQ8TCY5 172 aa3.82□□□□□ -1.8
ZEB1-219ENST00000560721 FAM104AQ969W3 186 aa3.82□□□□□ -1.8
ZEB1-219ENST00000560721 SPTAN1Q13813 2472 aaKnown RBP3.81□□□□□ -1.8
ZEB1-219ENST00000560721 HELZ2Q9BYK8 2649 aaKnown RBP3.81□□□□□ -1.8
ZEB1-219ENST00000560721 MGPP08493 103 aa3.81□□□□□ -1.8
ZEB1-219ENST00000560721 SCGB1D4Q6XE38 83 aa3.81□□□□□ -1.8
ZEB1-219ENST00000560721 Q6ZUT4 128 aa3.81□□□□□ -1.8
ZEB1-219ENST00000560721 PRO1854Q9UHT4 67 aa3.81□□□□□ -1.8
ZEB1-219ENST00000560721 KLK5Q9Y337 293 aaPredicted RBP3.81□□□□□ -1.8
ZEB1-219ENST00000560721 TINCRA0A1B0GVN0 87 aa3.81□□□□□ -1.8
ZEB1-219ENST00000560721 F6UB75 175 aa3.81□□□□□ -1.8
ZEB1-219ENST00000560721 J3QQQ9 107 aa3.81□□□□□ -1.8
ZEB1-219ENST00000560721 IGHV3-11P01762 117 aa3.81□□□□□ -1.8
ZEB1-219ENST00000560721 DEFB131AP59861 70 aa3.81□□□□□ -1.8
ZEB1-219ENST00000560721 DEFB1P60022 68 aa3.81□□□□□ -1.8
ZEB1-219ENST00000560721 RPL39P62891 51 aaKnown RBP3.81□□□□□ -1.8
ZEB1-219ENST00000560721 FAM159AQ6UWV7 190 aa3.81□□□□□ -1.8
ZEB1-219ENST00000560721 VPS13DQ5THJ4 4388 aa3.81□□□□□ -1.8
ZEB1-219ENST00000560721 TRAV10A0A0B4J240 114 aa3.8□□□□□ -1.8
ZEB1-219ENST00000560721 LINC01620Q4KN68 170 aa3.8□□□□□ -1.8
ZEB1-219ENST00000560721 LITAFQ99732 161 aa3.8□□□□□ -1.8
ZEB1-219ENST00000560721 FAM236DA0A1B0GTK5 79 aa3.8□□□□□ -1.8
ZEB1-219ENST00000560721 IGHV3-33P01772 117 aa3.8□□□□□ -1.8
ZEB1-219ENST00000560721 SPART-AS1P0CW21 52 aa3.8□□□□□ -1.8
ZEB1-219ENST00000560721 INAFM2P0DMQ5 153 aa3.8□□□□□ -1.8
ZEB1-219ENST00000560721 FAM236CP0DP71 79 aa3.8□□□□□ -1.8
ZEB1-219ENST00000560721 PSMB2P49721 201 aa3.8□□□□□ -1.8
ZEB1-219ENST00000560721 JPT2Q9H910 190 aa3.8□□□□□ -1.8
ZEB1-219ENST00000560721 IGLV5-45A0A087WSX0 123 aa3.8□□□□□ -1.8
ZEB1-219ENST00000560721 MT-ATP8P03928 68 aa3.8□□□□□ -1.8
ZEB1-219ENST00000560721 ZNF688P0C7X2 276 aa3.8□□□□□ -1.8
ZEB1-219ENST00000560721 C20orf203Q8NBC4 194 aa3.8□□□□□ -1.8
ZEB1-219ENST00000560721 FASNP49327 2511 aaKnown RBP3.8□□□□□ -1.8
ZEB1-219ENST00000560721 F8P00451 2351 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms