RNA–Protein interactions for RNA: ENST00000560070.5

USP3-217, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-217ENST00000560070 PRR34Q9NV39 138 aa5.65□□□□□ -1.5
USP3-217ENST00000560070 FAT2Q9NYQ8 4349 aa5.65□□□□□ -1.51
USP3-217ENST00000560070 TRBV24-1A0A075B6N3 115 aa5.64□□□□□ -1.51
USP3-217ENST00000560070 GAGE12HA6NDE8 117 aa5.64□□□□□ -1.51
USP3-217ENST00000560070 H7C423 109 aa5.64□□□□□ -1.51
USP3-217ENST00000560070 PPBPP02775 128 aa5.64□□□□□ -1.51
USP3-217ENST00000560070 RAB5AP20339 215 aa5.64□□□□□ -1.51
USP3-217ENST00000560070 GCSHP23434 173 aa5.64□□□□□ -1.51
USP3-217ENST00000560070 KRTAP10-1P60331 282 aa5.64□□□□□ -1.51
USP3-217ENST00000560070 LINC01620Q4KN68 170 aa5.64□□□□□ -1.51
USP3-217ENST00000560070 RNASE13Q5GAN3 156 aaKnown RBP5.64□□□□□ -1.51
USP3-217ENST00000560070 LCE1DQ5T752 114 aa5.64□□□□□ -1.51
USP3-217ENST00000560070 LINC00528Q8N1L1 170 aa5.64□□□□□ -1.51
USP3-217ENST00000560070 OR5A1Q8NGJ0 315 aa5.64□□□□□ -1.51
USP3-217ENST00000560070 SMIM2Q9BVW6 85 aa5.64□□□□□ -1.51
USP3-217ENST00000560070 TGIF2-C20orf24A0A0A6YYL0 155 aa5.63□□□□□ -1.51
USP3-217ENST00000560070 USP17L23D6RBM5 183 aa5.63□□□□□ -1.51
USP3-217ENST00000560070 RPL39P62891 51 aaKnown RBP5.63□□□□□ -1.51
USP3-217ENST00000560070 RHEBQ15382 184 aa5.63□□□□□ -1.51
USP3-217ENST00000560070 NDUFA5Q16718 116 aa5.63□□□□□ -1.51
USP3-217ENST00000560070 KRTAP26-1Q6PEX3 210 aa5.63□□□□□ -1.51
USP3-217ENST00000560070 ZNF664Q8N3J9 261 aa5.63□□□□□ -1.51
USP3-217ENST00000560070 TRAV8-4A0A0B4J246 113 aa5.62□□□□□ -1.51
USP3-217ENST00000560070 XCL1P47992 114 aa5.62□□□□□ -1.51
USP3-217ENST00000560070 HAMPP81172 84 aa5.62□□□□□ -1.51
USP3-217ENST00000560070 FABP9Q0Z7S8 132 aa5.62□□□□□ -1.51
USP3-217ENST00000560070 CHCHD10Q8WYQ3 142 aaPredicted RBP5.62□□□□□ -1.51
USP3-217ENST00000560070 TMEM18Q96B42 140 aa5.62□□□□□ -1.51
USP3-217ENST00000560070 OPRPNQ99935 248 aaPredicted RBP5.62□□□□□ -1.51
USP3-217ENST00000560070 MAP1LC3AQ9H492 121 aa5.62□□□□□ -1.51
USP3-217ENST00000560070 CDC42SE2Q9NRR3 84 aa5.62□□□□□ -1.51
USP3-217ENST00000560070 HECTD4Q9Y4D8 3996 aa5.62□□□□□ -1.51
USP3-217ENST00000560070 TRAV9-1A0A075B6T8 112 aa5.61□□□□□ -1.51
USP3-217ENST00000560070 TRAV13-1A0A0B4J241 112 aa5.61□□□□□ -1.51
USP3-217ENST00000560070 LINC00959A0A1B0GUT2 108 aa5.61□□□□□ -1.51
USP3-217ENST00000560070 PHOX2AO14813 284 aa5.61□□□□□ -1.51
USP3-217ENST00000560070 CCL25O15444 150 aa5.61□□□□□ -1.51
USP3-217ENST00000560070 SNAPINO95295 136 aa5.61□□□□□ -1.51
USP3-217ENST00000560070 PRSS1P07477 247 aa5.61□□□□□ -1.51
USP3-217ENST00000560070 ZNF25P17030 456 aaPredicted RBP5.61□□□□□ -1.51
USP3-217ENST00000560070 RPL32P62910 135 aaKnown RBP5.61□□□□□ -1.51
USP3-217ENST00000560070 SVBPQ8N300 66 aa5.61□□□□□ -1.51
USP3-217ENST00000560070 GNB1LQ9BYB4 327 aa5.61□□□□□ -1.51
USP3-217ENST00000560070 MRPL18Q9H0U6 180 aaKnown RBP5.61□□□□□ -1.51
USP3-217ENST00000560070 UBE2D4Q9Y2X8 147 aa5.61□□□□□ -1.51
USP3-217ENST00000560070 IFI27P40305 119 aaPredicted RBP5.6□□□□□ -1.51
USP3-217ENST00000560070 SS18Q15532 418 aa5.6□□□□□ -1.51
USP3-217ENST00000560070 CDPF1Q6NVV7 123 aa5.6□□□□□ -1.51
USP3-217ENST00000560070 Q6ZUT4 128 aa5.6□□□□□ -1.51
USP3-217ENST00000560070 MRPL52Q86TS9 123 aaKnown RBP5.6□□□□□ -1.51
USP3-217ENST00000560070 Q8N8P6 123 aa5.6□□□□□ -1.51
USP3-217ENST00000560070 PRSS3P2Q8NHM4 247 aa5.6□□□□□ -1.51
USP3-217ENST00000560070 NTN5Q8WTR8 489 aaPredicted RBP5.6□□□□□ -1.51
USP3-217ENST00000560070 hDV102S1A0JD36 115 aa5.59□□□□□ -1.51
USP3-217ENST00000560070 PRSS47A8MTI9 375 aa5.59□□□□□ -1.51
USP3-217ENST00000560070 SMAGPQ0VAQ4 97 aa5.59□□□□□ -1.51
USP3-217ENST00000560070 HIGD2BQ4VC39 106 aa5.59□□□□□ -1.51
USP3-217ENST00000560070 C14orf177Q52M58 125 aa5.59□□□□□ -1.51
USP3-217ENST00000560070 ALKBH7Q9BT30 221 aaPredicted RBP5.59□□□□□ -1.51
USP3-217ENST00000560070 FAM30AQ9NZY2 134 aa5.59□□□□□ -1.51
USP3-217ENST00000560070 LAMTOR2Q9Y2Q5 125 aa5.59□□□□□ -1.51
USP3-217ENST00000560070 TRAPPC1Q9Y5R8 145 aa5.59□□□□□ -1.51
USP3-217ENST00000560070 PKD1P98161 4303 aa5.59□□□□□ -1.51
USP3-217ENST00000560070 SMR3BP02814 79 aaPredicted RBP5.58□□□□□ -1.52
USP3-217ENST00000560070 FOXI1Q12951 378 aa5.58□□□□□ -1.52
USP3-217ENST00000560070 ZC2HC1BQ5TFG8 222 aa5.58□□□□□ -1.52
USP3-217ENST00000560070 CBLN2Q8IUK8 224 aa5.58□□□□□ -1.52
USP3-217ENST00000560070 DNAH11Q96DT5 4516 aa5.58□□□□□ -1.52
USP3-217ENST00000560070 XGP55808 180 aa5.57□□□□□ -1.52
USP3-217ENST00000560070 COX19Q49B96 90 aa5.57□□□□□ -1.52
USP3-217ENST00000560070 CFAP161Q6P656 301 aa5.57□□□□□ -1.52
USP3-217ENST00000560070 C2orf66Q6UXQ4 117 aa5.57□□□□□ -1.52
USP3-217ENST00000560070 C5orf38Q86SI9 138 aa5.57□□□□□ -1.52
USP3-217ENST00000560070 LINC00526Q96FQ7 95 aa5.57□□□□□ -1.52
USP3-217ENST00000560070 TIMM21Q9BVV7 248 aa5.57□□□□□ -1.52
USP3-217ENST00000560070 KRTAP17-1Q9BYP8 105 aa5.57□□□□□ -1.52
USP3-217ENST00000560070 NXT2Q9NPJ8 142 aaKnown RBP5.57□□□□□ -1.52
USP3-217ENST00000560070 SPANXA1Q9NS26 97 aa5.57□□□□□ -1.52
USP3-217ENST00000560070 IFITM10A6NMD0 228 aa5.56□□□□□ -1.52
USP3-217ENST00000560070 C1orf196B1AJZ1 125 aa5.56□□□□□ -1.52
USP3-217ENST00000560070 CDK2AP2O75956 126 aa5.56□□□□□ -1.52
USP3-217ENST00000560070 MALP21145 153 aa5.56□□□□□ -1.52
USP3-217ENST00000560070 ORMDL2Q53FV1 153 aa5.56□□□□□ -1.52
USP3-217ENST00000560070 FA2HQ7L5A8 372 aa5.56□□□□□ -1.52
USP3-217ENST00000560070 C15orf56Q8N910 161 aa5.56□□□□□ -1.52
USP3-217ENST00000560070 FAM104AQ969W3 186 aa5.56□□□□□ -1.52
USP3-217ENST00000560070 DPH3Q96FX2 82 aa5.56□□□□□ -1.52
USP3-217ENST00000560070 AP5S1Q9NUS5 200 aa5.56□□□□□ -1.52
USP3-217ENST00000560070 CYSLTR1Q9Y271 337 aa5.56□□□□□ -1.52
USP3-217ENST00000560070 CSDC2Q9Y534 153 aaKnown RBP5.56□□□□□ -1.52
USP3-217ENST00000560070 IGLV4-3A0A075B6K6 122 aa5.55□□□□□ -1.52
USP3-217ENST00000560070 MT-ND6P03923 174 aa5.55□□□□□ -1.52
USP3-217ENST00000560070 SLPIP03973 132 aa5.55□□□□□ -1.52
USP3-217ENST00000560070 CD164L2Q6UWJ8 174 aa5.55□□□□□ -1.52
USP3-217ENST00000560070 SMCO4Q9NRQ5 59 aa5.55□□□□□ -1.52
USP3-217ENST00000560070 DYNC1H1Q14204 4646 aaKnown RBP5.54□□□□□ -1.52
USP3-217ENST00000560070 COX7A2LO14548 114 aa5.54□□□□□ -1.52
USP3-217ENST00000560070 MRPS36P82909 103 aaKnown RBP5.54□□□□□ -1.52
USP3-217ENST00000560070 TMEM141Q96I45 108 aa5.54□□□□□ -1.52
USP3-217ENST00000560070 YPEL4Q96NS1 127 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 109.7 ms