RNA–Protein interactions for RNA: ENST00000559737.5

USP3-AS1-203, USP3 antisense RNA 1, humanhuman

TSL 1 (best)

Gene USP3-AS1, Length 1,434 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-AS1-203ENST00000559737 OPRPNQ99935 248 aaPredicted RBP12.58□□□□□ -0.4
USP3-AS1-203ENST00000559737 K7EP13 123 aa12.57□□□□□ -0.4
USP3-AS1-203ENST00000559737 CLPSL2Q6UWE3 100 aa12.57□□□□□ -0.4
USP3-AS1-203ENST00000559737 LINC00269Q8N2A0 174 aa12.57□□□□□ -0.4
USP3-AS1-203ENST00000559737 FAM104AQ969W3 186 aa12.57□□□□□ -0.4
USP3-AS1-203ENST00000559737 CDC42SE2Q9NRR3 84 aa12.57□□□□□ -0.4
USP3-AS1-203ENST00000559737 SPANXA1Q9NS26 97 aa12.57□□□□□ -0.4
USP3-AS1-203ENST00000559737 CSDC2Q9Y534 153 aaKnown RBP12.57□□□□□ -0.4
USP3-AS1-203ENST00000559737 G0S2P27469 103 aa12.56□□□□□ -0.4
USP3-AS1-203ENST00000559737 SMAGPQ0VAQ4 97 aa12.56□□□□□ -0.4
USP3-AS1-203ENST00000559737 Q6ZUT4 128 aa12.56□□□□□ -0.4
USP3-AS1-203ENST00000559737 HSBP1O75506 76 aa12.55□□□□□ -0.4
USP3-AS1-203ENST00000559737 RNASE13Q5GAN3 156 aaKnown RBP12.55□□□□□ -0.4
USP3-AS1-203ENST00000559737 ENHOQ6UWT2 76 aa12.55□□□□□ -0.4
USP3-AS1-203ENST00000559737 FAM19A2Q8N3H0 131 aa12.55□□□□□ -0.4
USP3-AS1-203ENST00000559737 UBE2WQ96B02 151 aa12.55□□□□□ -0.4
USP3-AS1-203ENST00000559737 PYGO1Q9Y3Y4 419 aa12.55□□□□□ -0.4
USP3-AS1-203ENST00000559737 IGIPA6NJ69 53 aa12.54□□□□□ -0.4
USP3-AS1-203ENST00000559737 HBDP02042 147 aa12.54□□□□□ -0.4
USP3-AS1-203ENST00000559737 NDUFA6P56556 154 aa12.54□□□□□ -0.4
USP3-AS1-203ENST00000559737 ZNF664Q8N3J9 261 aa12.54□□□□□ -0.4
USP3-AS1-203ENST00000559737 Q9HAA7 133 aa12.54□□□□□ -0.4
USP3-AS1-203ENST00000559737 PRR34Q9NV39 138 aa12.54□□□□□ -0.4
USP3-AS1-203ENST00000559737 IGLV4-3A0A075B6K6 122 aa12.54□□□□□ -0.4
USP3-AS1-203ENST00000559737 REG3AQ06141 175 aa12.54□□□□□ -0.4
USP3-AS1-203ENST00000559737 SCGB3A1Q96QR1 104 aa12.54□□□□□ -0.4
USP3-AS1-203ENST00000559737 RYR2Q92736 4967 aa12.53□□□□□ -0.4
USP3-AS1-203ENST00000559737 IGKV3OR2-268A0A0C4DH90 116 aa12.53□□□□□ -0.4
USP3-AS1-203ENST00000559737 CRPP02741 224 aa12.52□□□□□ -0.41
USP3-AS1-203ENST00000559737 MRPS36P82909 103 aaKnown RBP12.52□□□□□ -0.41
USP3-AS1-203ENST00000559737 ERASQ7Z444 233 aa12.52□□□□□ -0.41
USP3-AS1-203ENST00000559737 TIMM17AQ99595 171 aa12.52□□□□□ -0.41
USP3-AS1-203ENST00000559737 DNAH2Q9P225 4427 aa12.52□□□□□ -0.41
USP3-AS1-203ENST00000559737 LINC01549A6NIU2 74 aa12.51□□□□□ -0.41
USP3-AS1-203ENST00000559737 PDZD11Q5EBL8 140 aa12.51□□□□□ -0.41
USP3-AS1-203ENST00000559737 COA6Q5JTJ3 125 aaKnown RBP12.51□□□□□ -0.41
USP3-AS1-203ENST00000559737 ZC2HC1BQ5TFG8 222 aa12.51□□□□□ -0.41
USP3-AS1-203ENST00000559737 TRAV8-3A0A0A6YYJ7 113 aa12.5□□□□□ -0.41
USP3-AS1-203ENST00000559737 C6orf223Q8N319 242 aa12.5□□□□□ -0.41
USP3-AS1-203ENST00000559737 TMEM141Q96I45 108 aa12.5□□□□□ -0.41
USP3-AS1-203ENST00000559737 DNAH10Q8IVF4 4471 aa12.48□□□□□ -0.41
USP3-AS1-203ENST00000559737 IGLV10-54A0A075B6I4 117 aa12.48□□□□□ -0.41
USP3-AS1-203ENST00000559737 MIAQ16674 131 aa12.48□□□□□ -0.41
USP3-AS1-203ENST00000559737 C1orf134Q5TEV5 83 aa12.48□□□□□ -0.41
USP3-AS1-203ENST00000559737 LINC00959A0A1B0GUT2 108 aa12.47□□□□□ -0.41
USP3-AS1-203ENST00000559737 NPSP0C0P6 89 aa12.47□□□□□ -0.41
USP3-AS1-203ENST00000559737 LINC00173Q6ZV60 143 aa12.47□□□□□ -0.41
USP3-AS1-203ENST00000559737 IGKV2D-24A0A075B6R9 120 aa12.46□□□□□ -0.41
USP3-AS1-203ENST00000559737 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.46□□□□□ -0.41
USP3-AS1-203ENST00000559737 Q6ZN92 141 aa12.46□□□□□ -0.41
USP3-AS1-203ENST00000559737 TEX43Q6ZNM6 134 aa12.46□□□□□ -0.41
USP3-AS1-203ENST00000559737 AMELXQ99217 191 aa12.46□□□□□ -0.41
USP3-AS1-203ENST00000559737 VCX2Q9H322 139 aa12.46□□□□□ -0.41
USP3-AS1-203ENST00000559737 TRAV13-1A0A0B4J241 112 aa12.45□□□□□ -0.42
USP3-AS1-203ENST00000559737 IFITM10A6NMD0 228 aa12.45□□□□□ -0.42
USP3-AS1-203ENST00000559737 Q6ZRN7 208 aaPredicted RBP12.45□□□□□ -0.42
USP3-AS1-203ENST00000559737 NFE4Q86UQ8 179 aa12.45□□□□□ -0.42
USP3-AS1-203ENST00000559737 BAALCQ8WXS3 180 aa12.45□□□□□ -0.42
USP3-AS1-203ENST00000559737 C1orf43Q9BWL3 253 aa12.45□□□□□ -0.42
USP3-AS1-203ENST00000559737 TRAV8-4A0A0B4J246 113 aa12.45□□□□□ -0.42
USP3-AS1-203ENST00000559737 ATP5LO75964 103 aa12.45□□□□□ -0.42
USP3-AS1-203ENST00000559737 FABP4P15090 132 aa12.45□□□□□ -0.42
USP3-AS1-203ENST00000559737 PAPPA-AS1Q5QFB9 102 aa12.45□□□□□ -0.42
USP3-AS1-203ENST00000559737 KRTAP26-1Q6PEX3 210 aa12.45□□□□□ -0.42
USP3-AS1-203ENST00000559737 LEPROTL1O95214 131 aa12.44□□□□□ -0.42
USP3-AS1-203ENST00000559737 FRAS1Q86XX4 4008 aa12.43□□□□□ -0.42
USP3-AS1-203ENST00000559737 RTL8CO15255 209 aa12.43□□□□□ -0.42
USP3-AS1-203ENST00000559737 S100A6P06703 90 aa12.43□□□□□ -0.42
USP3-AS1-203ENST00000559737 SS18Q15532 418 aa12.43□□□□□ -0.42
USP3-AS1-203ENST00000559737 CHCHD10Q8WYQ3 142 aaPredicted RBP12.43□□□□□ -0.42
USP3-AS1-203ENST00000559737 IFI27L1Q96BM0 104 aa12.43□□□□□ -0.42
USP3-AS1-203ENST00000559737 RMI2Q96E14 147 aa12.43□□□□□ -0.42
USP3-AS1-203ENST00000559737 RYR3Q15413 4870 aa12.43□□□□□ -0.42
USP3-AS1-203ENST00000559737 PRSS29PA6NIE9 313 aa12.42□□□□□ -0.42
USP3-AS1-203ENST00000559737 CCL25O15444 150 aa12.42□□□□□ -0.42
USP3-AS1-203ENST00000559737 C2orf88Q9BSF0 95 aa12.42□□□□□ -0.42
USP3-AS1-203ENST00000559737 TM2D2Q9BX73 214 aa12.42□□□□□ -0.42
USP3-AS1-203ENST00000559737 XCL1P47992 114 aa12.41□□□□□ -0.42
USP3-AS1-203ENST00000559737 UBE2D1P51668 147 aa12.41□□□□□ -0.42
USP3-AS1-203ENST00000559737 PMVKQ15126 192 aa12.41□□□□□ -0.42
USP3-AS1-203ENST00000559737 MAPKAPK5-AS1Q8N8E1 139 aa12.41□□□□□ -0.42
USP3-AS1-203ENST00000559737 CST9LQ9H4G1 147 aa12.41□□□□□ -0.42
USP3-AS1-203ENST00000559737 DNAH17Q9UFH2 4485 aa12.4□□□□□ -0.42
USP3-AS1-203ENST00000559737 GAGE12HA6NDE8 117 aa12.4□□□□□ -0.42
USP3-AS1-203ENST00000559737 PSCAO43653 123 aa12.39□□□□□ -0.43
USP3-AS1-203ENST00000559737 PRSS1P07477 247 aa12.39□□□□□ -0.43
USP3-AS1-203ENST00000559737 SNRPEP62304 92 aaKnown RBP12.39□□□□□ -0.43
USP3-AS1-203ENST00000559737 HSPB8Q9UJY1 196 aa12.39□□□□□ -0.43
USP3-AS1-203ENST00000559737 COX11Q9Y6N1 276 aa12.39□□□□□ -0.43
USP3-AS1-203ENST00000559737 LINC00242Q5T6M2 205 aa12.38□□□□□ -0.43
USP3-AS1-203ENST00000559737 HIST3H2BBQ8N257 126 aa12.38□□□□□ -0.43
USP3-AS1-203ENST00000559737 TMA7Q9Y2S6 64 aaKnown RBP12.38□□□□□ -0.43
USP3-AS1-203ENST00000559737 COX6A2Q02221 97 aa12.37□□□□□ -0.43
USP3-AS1-203ENST00000559737 FOXI1Q12951 378 aa12.37□□□□□ -0.43
USP3-AS1-203ENST00000559737 A0A0J9YXV3 536 aa12.37□□□□□ -0.43
USP3-AS1-203ENST00000559737 CD164L2Q6UWJ8 174 aa12.37□□□□□ -0.43
USP3-AS1-203ENST00000559737 C5orf52A6NGY3 159 aa12.36□□□□□ -0.43
USP3-AS1-203ENST00000559737 H0Y8G0 127 aa12.36□□□□□ -0.43
USP3-AS1-203ENST00000559737 TNP2Q05952 138 aa12.36□□□□□ -0.43
USP3-AS1-203ENST00000559737 FAM19A3Q7Z5A8 133 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms