RNA–Protein interactions for RNA: ENST00000559328.5

MARK3-219, Transcript of microtubule affinity regulating kinase 3, human

TSL 4

Gene MARK3, Length 533 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MARK3-219	ENST00000559328	C2orf66	Q6UXQ4	117 aa		13.7	□□□□□ -0.22
MARK3-219	ENST00000559328	ZNF664	Q8N3J9	261 aa		13.7	□□□□□ -0.22
MARK3-219	ENST00000559328	SPANXA1	Q9NS26	97 aa		13.7	□□□□□ -0.22
MARK3-219	ENST00000559328	CYSLTR1	Q9Y271	337 aa		13.7	□□□□□ -0.22
MARK3-219	ENST00000559328	DNAH2	Q9P225	4427 aa		13.7	□□□□□ -0.22
MARK3-219	ENST00000559328	IGKV3OR2-268	A0A0C4DH90	116 aa		13.69	□□□□□ -0.22
MARK3-219	ENST00000559328	PSCA	O43653	123 aa		13.69	□□□□□ -0.22
MARK3-219	ENST00000559328	LINC00614	P0C842	121 aa		13.69	□□□□□ -0.22
MARK3-219	ENST00000559328	TNP2	Q05952	138 aa		13.69	□□□□□ -0.22
MARK3-219	ENST00000559328	URB1-AS1	Q96HZ7	61 aa		13.69	□□□□□ -0.22
MARK3-219	ENST00000559328	C1orf43	Q9BWL3	253 aa		13.69	□□□□□ -0.22
MARK3-219	ENST00000559328	G0S2	P27469	103 aa		13.68	□□□□□ -0.22
MARK3-219	ENST00000559328		Q6ZUT4	128 aa		13.68	□□□□□ -0.22
MARK3-219	ENST00000559328	COX11	Q9Y6N1	276 aa		13.68	□□□□□ -0.22
MARK3-219	ENST00000559328	DNAH10	Q8IVF4	4471 aa		13.67	□□□□□ -0.22
MARK3-219	ENST00000559328	TRAV8-4	A0A0B4J246	113 aa		13.67	□□□□□ -0.22
MARK3-219	ENST00000559328	RAB5B	P61020	215 aa		13.67	□□□□□ -0.22
MARK3-219	ENST00000559328	AP5S1	Q9NUS5	200 aa		13.67	□□□□□ -0.22
MARK3-219	ENST00000559328	PYGO1	Q9Y3Y4	419 aa		13.67	□□□□□ -0.22
MARK3-219	ENST00000559328	FRAS1	Q86XX4	4008 aa		13.67	□□□□□ -0.22
MARK3-219	ENST00000559328	IGLV10-54	A0A075B6I4	117 aa		13.66	□□□□□ -0.22
MARK3-219	ENST00000559328	RNASE13	Q5GAN3	156 aa	Known RBP	13.66	□□□□□ -0.22
MARK3-219	ENST00000559328	FAM104A	Q969W3	186 aa		13.66	□□□□□ -0.22
MARK3-219	ENST00000559328	OPRPN	Q99935	248 aa	Predicted RBP	13.66	□□□□□ -0.22
MARK3-219	ENST00000559328	MRPS36	P82909	103 aa	Known RBP	13.65	□□□□□ -0.22
MARK3-219	ENST00000559328	TOMM6	Q96B49	74 aa		13.65	□□□□□ -0.22
MARK3-219	ENST00000559328	IGLV4-3	A0A075B6K6	122 aa		13.63	□□□□□ -0.23
MARK3-219	ENST00000559328	KRTAP26-1	Q6PEX3	210 aa		13.63	□□□□□ -0.23
MARK3-219	ENST00000559328	MAPKAPK5-AS1	Q8N8E1	139 aa		13.63	□□□□□ -0.23
MARK3-219	ENST00000559328	DNAH17	Q9UFH2	4485 aa		13.62	□□□□□ -0.23
MARK3-219	ENST00000559328	LINC00959	A0A1B0GUT2	108 aa		13.62	□□□□□ -0.23
MARK3-219	ENST00000559328	IGIP	A6NJ69	53 aa		13.62	□□□□□ -0.23
MARK3-219	ENST00000559328	BAGE3	Q86Y29	109 aa		13.62	□□□□□ -0.23
MARK3-219	ENST00000559328	CHCHD1	Q96BP2	118 aa	Known RBP	13.62	□□□□□ -0.23
MARK3-219	ENST00000559328		A0A087WTM6	91 aa		13.61	□□□□□ -0.23
MARK3-219	ENST00000559328	LINC01549	A6NIU2	74 aa		13.61	□□□□□ -0.23
MARK3-219	ENST00000559328	TMEM141	Q96I45	108 aa		13.61	□□□□□ -0.23
MARK3-219	ENST00000559328		A0A096LNJ9	63 aa		13.6	□□□□□ -0.23
MARK3-219	ENST00000559328	LRCOL1	A6NCL2	159 aa		13.6	□□□□□ -0.23
MARK3-219	ENST00000559328	NPS	P0C0P6	89 aa		13.6	□□□□□ -0.23
MARK3-219	ENST00000559328	SS18	Q15532	418 aa		13.6	□□□□□ -0.23
MARK3-219	ENST00000559328	PMCHL1	Q16048	86 aa		13.6	□□□□□ -0.23
MARK3-219	ENST00000559328	ERAS	Q7Z444	233 aa		13.6	□□□□□ -0.23
MARK3-219	ENST00000559328	BAALC	Q8WXS3	180 aa		13.6	□□□□□ -0.23
MARK3-219	ENST00000559328	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	13.6	□□□□□ -0.23
MARK3-219	ENST00000559328	SCGB3A1	Q96QR1	104 aa		13.6	□□□□□ -0.23
MARK3-219	ENST00000559328	TIMM17A	Q99595	171 aa		13.6	□□□□□ -0.23
MARK3-219	ENST00000559328	TRAV13-1	A0A0B4J241	112 aa		13.59	□□□□□ -0.23
MARK3-219	ENST00000559328	HBD	P02042	147 aa		13.59	□□□□□ -0.23
MARK3-219	ENST00000559328		A0A1B0GVY2	172 aa		13.58	□□□□□ -0.24
MARK3-219	ENST00000559328	GAGE12H	A6NDE8	117 aa		13.58	□□□□□ -0.24
MARK3-219	ENST00000559328	CCL25	O15444	150 aa		13.58	□□□□□ -0.24
MARK3-219	ENST00000559328		Q6ZN92	141 aa		13.58	□□□□□ -0.24
MARK3-219	ENST00000559328	IFITM10	A6NMD0	228 aa		13.57	□□□□□ -0.24
MARK3-219	ENST00000559328	C1orf196	B1AJZ1	125 aa		13.57	□□□□□ -0.24
MARK3-219	ENST00000559328	EREG	O14944	169 aa		13.57	□□□□□ -0.24
MARK3-219	ENST00000559328	HIST1H2BK	O60814	126 aa		13.57	□□□□□ -0.24
MARK3-219	ENST00000559328	HIST1H2BJ	P06899	126 aa		13.57	□□□□□ -0.24
MARK3-219	ENST00000559328	HIST1H2BO	P23527	126 aa		13.57	□□□□□ -0.24
MARK3-219	ENST00000559328	HIST1H2BB	P33778	126 aa		13.57	□□□□□ -0.24
MARK3-219	ENST00000559328	HIST1H2BD	P58876	126 aa		13.57	□□□□□ -0.24
MARK3-219	ENST00000559328	HIST1H2BC	P62807	126 aa		13.57	□□□□□ -0.24
MARK3-219	ENST00000559328	WFDC2	Q14508	124 aa		13.57	□□□□□ -0.24
MARK3-219	ENST00000559328	HIST2H2BE	Q16778	126 aa		13.57	□□□□□ -0.24
MARK3-219	ENST00000559328	HIST2H2BF	Q5QNW6	126 aa	Predicted RBP	13.57	□□□□□ -0.24
MARK3-219	ENST00000559328	TEX43	Q6ZNM6	134 aa		13.57	□□□□□ -0.24
MARK3-219	ENST00000559328	HIST1H2BH	Q93079	126 aa		13.57	□□□□□ -0.24
MARK3-219	ENST00000559328	HIST1H2BN	Q99877	126 aa		13.57	□□□□□ -0.24
MARK3-219	ENST00000559328	HIST1H2BM	Q99879	126 aa		13.57	□□□□□ -0.24
MARK3-219	ENST00000559328	LECT2	O14960	151 aa		13.56	□□□□□ -0.24
MARK3-219	ENST00000559328	HSBP1	O75506	76 aa		13.56	□□□□□ -0.24
MARK3-219	ENST00000559328	XCL1	P47992	114 aa		13.56	□□□□□ -0.24
MARK3-219	ENST00000559328	PAPPA-AS1	Q5QFB9	102 aa		13.56	□□□□□ -0.24
MARK3-219	ENST00000559328	ZC2HC1B	Q5TFG8	222 aa		13.56	□□□□□ -0.24
MARK3-219	ENST00000559328	AMELX	Q99217	191 aa		13.56	□□□□□ -0.24
MARK3-219	ENST00000559328	VCX2	Q9H322	139 aa		13.56	□□□□□ -0.24
MARK3-219	ENST00000559328	SERF1A	O75920	110 aa		13.55	□□□□□ -0.24
MARK3-219	ENST00000559328	LINC00310	P59036	64 aa		13.55	□□□□□ -0.24
MARK3-219	ENST00000559328	LINC00173	Q6ZV60	143 aa		13.55	□□□□□ -0.24
MARK3-219	ENST00000559328	FAT2	Q9NYQ8	4349 aa		13.55	□□□□□ -0.24
MARK3-219	ENST00000559328	FOXI1	Q12951	378 aa		13.54	□□□□□ -0.24
MARK3-219	ENST00000559328	PDZD11	Q5EBL8	140 aa		13.54	□□□□□ -0.24
MARK3-219	ENST00000559328	C2orf88	Q9BSF0	95 aa		13.54	□□□□□ -0.24
MARK3-219	ENST00000559328	CD164L2	Q6UWJ8	174 aa		13.53	□□□□□ -0.24
MARK3-219	ENST00000559328	USP17L23	D6RBM5	183 aa		13.52	□□□□□ -0.25
MARK3-219	ENST00000559328	BORCS8-MEF2B	H3BNR1	382 aa	Predicted RBP	13.52	□□□□□ -0.25
MARK3-219	ENST00000559328	FAM19A2	Q8N3H0	131 aa		13.52	□□□□□ -0.25
MARK3-219	ENST00000559328		Q8N814	137 aa		13.52	□□□□□ -0.25
MARK3-219	ENST00000559328	NUPR1	O60356	82 aa		13.51	□□□□□ -0.25
MARK3-219	ENST00000559328	UBE2D1	P51668	147 aa		13.51	□□□□□ -0.25
MARK3-219	ENST00000559328	ATP5L	O75964	103 aa		13.5	□□□□□ -0.25
MARK3-219	ENST00000559328	SPATA12	Q7Z6I5	190 aa		13.5	□□□□□ -0.25
MARK3-219	ENST00000559328	KRTAP10-2	P60368	255 aa		13.49	□□□□□ -0.25
MARK3-219	ENST00000559328	C14orf177	Q52M58	125 aa		13.49	□□□□□ -0.25
MARK3-219	ENST00000559328	LINC00242	Q5T6M2	205 aa		13.48	□□□□□ -0.25
MARK3-219	ENST00000559328	PMVK	Q15126	192 aa		13.47	□□□□□ -0.25
MARK3-219	ENST00000559328	CST9L	Q9H4G1	147 aa		13.47	□□□□□ -0.25
MARK3-219	ENST00000559328	PKD1	P98161	4303 aa		13.47	□□□□□ -0.25
MARK3-219	ENST00000559328	IGLV2-33	A0A075B6J2	118 aa	Predicted RBP	13.46	□□□□□ -0.25
MARK3-219	ENST00000559328	COX7A2L	O14548	114 aa		13.46	□□□□□ -0.25

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