RNA–Protein interactions for RNA: ENST00000559289.1

SHC4-206, Transcript of SHC adaptor protein 4, humanhuman

TSL 3

Gene SHC4, Length 864 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4-206ENST00000559289 IGLV4-60A0A075B6I1 120 aa4□□□□□ -1.77
SHC4-206ENST00000559289 NBDYA0A0U1RRE5 68 aa4□□□□□ -1.77
SHC4-206ENST00000559289 C1orf196B1AJZ1 125 aa4□□□□□ -1.77
SHC4-206ENST00000559289 IGHV3-30P01768 117 aa4□□□□□ -1.77
SHC4-206ENST00000559289 IGHV3-33P01772 117 aa4□□□□□ -1.77
SHC4-206ENST00000559289 IGHV3-30-3P0DP02 117 aa4□□□□□ -1.77
SHC4-206ENST00000559289 IGHV3-30-5P0DP03 117 aa4□□□□□ -1.77
SHC4-206ENST00000559289 LINC00310P59036 64 aa4□□□□□ -1.77
SHC4-206ENST00000559289 TNP2Q05952 138 aa4□□□□□ -1.77
SHC4-206ENST00000559289 GAGE6Q13070 117 aa4□□□□□ -1.77
SHC4-206ENST00000559289 CDPF1Q6NVV7 123 aa4□□□□□ -1.77
SHC4-206ENST00000559289 Q8N976 141 aa4□□□□□ -1.77
SHC4-206ENST00000559289 C20orf203Q8NBC4 194 aa4□□□□□ -1.77
SHC4-206ENST00000559289 FAM104AQ969W3 186 aa4□□□□□ -1.77
SHC4-206ENST00000559289 KIR2DL4Q99706 377 aa4□□□□□ -1.77
SHC4-206ENST00000559289 CHCHD5Q9BSY4 110 aa4□□□□□ -1.77
SHC4-206ENST00000559289 NXT2Q9NPJ8 142 aaKnown RBP4□□□□□ -1.77
SHC4-206ENST00000559289 FRAS1Q86XX4 4008 aa3.99□□□□□ -1.77
SHC4-206ENST00000559289 A0A096LNJ9 63 aa3.99□□□□□ -1.77
SHC4-206ENST00000559289 A0A1B0GUV1 79 aa3.99□□□□□ -1.77
SHC4-206ENST00000559289 M0R2N4 97 aa3.99□□□□□ -1.77
SHC4-206ENST00000559289 FGF6P10767 208 aa3.99□□□□□ -1.77
SHC4-206ENST00000559289 FCER1GP30273 86 aa3.99□□□□□ -1.77
SHC4-206ENST00000559289 AKR1D1P51857 326 aa3.99□□□□□ -1.77
SHC4-206ENST00000559289 RAB5BP61020 215 aa3.99□□□□□ -1.77
SHC4-206ENST00000559289 RBX1P62877 108 aa3.99□□□□□ -1.77
SHC4-206ENST00000559289 RPL39P62891 51 aaKnown RBP3.99□□□□□ -1.77
SHC4-206ENST00000559289 MRPL52Q86TS9 123 aaKnown RBP3.99□□□□□ -1.77
SHC4-206ENST00000559289 UBE2D4Q9Y2X8 147 aa3.99□□□□□ -1.77
SHC4-206ENST00000559289 RYR2Q92736 4967 aa3.98□□□□□ -1.77
SHC4-206ENST00000559289 IBA57-AS1B1ANH7 110 aa3.98□□□□□ -1.77
SHC4-206ENST00000559289 USP17L23D6RBM5 183 aa3.98□□□□□ -1.77
SHC4-206ENST00000559289 TMEM262E9PQX1 116 aa3.98□□□□□ -1.77
SHC4-206ENST00000559289 H7C423 109 aa3.98□□□□□ -1.77
SHC4-206ENST00000559289 K7EMI3 77 aa3.98□□□□□ -1.77
SHC4-206ENST00000559289 NUPR1O60356 82 aa3.98□□□□□ -1.77
SHC4-206ENST00000559289 Q0VG73 95 aa3.98□□□□□ -1.77
SHC4-206ENST00000559289 LAGE3Q14657 143 aa3.98□□□□□ -1.77
SHC4-206ENST00000559289 ENHOQ6UWT2 76 aa3.98□□□□□ -1.77
SHC4-206ENST00000559289 Q6ZRN7 208 aaPredicted RBP3.98□□□□□ -1.77
SHC4-206ENST00000559289 PRSS3P2Q8NHM4 247 aa3.98□□□□□ -1.77
SHC4-206ENST00000559289 KRTAP4-11Q9BYQ6 195 aa3.98□□□□□ -1.77
SHC4-206ENST00000559289 KLK12Q9UKR0 248 aa3.98□□□□□ -1.77
SHC4-206ENST00000559289 DNAH17Q9UFH2 4485 aa3.97□□□□□ -1.77
SHC4-206ENST00000559289 A0A087WX48 190 aa3.97□□□□□ -1.77
SHC4-206ENST00000559289 K7EP13 123 aa3.97□□□□□ -1.77
SHC4-206ENST00000559289 UBE2L6O14933 153 aa3.97□□□□□ -1.77
SHC4-206ENST00000559289 RTL8CO15255 209 aa3.97□□□□□ -1.77
SHC4-206ENST00000559289 HIST1H2BKO60814 126 aa3.97□□□□□ -1.77
SHC4-206ENST00000559289 ANGP03950 147 aaKnown RBP3.97□□□□□ -1.77
SHC4-206ENST00000559289 HIST1H2BJP06899 126 aa3.97□□□□□ -1.77
SHC4-206ENST00000559289 LINC00614P0C842 121 aa3.97□□□□□ -1.77
SHC4-206ENST00000559289 HIST1H2BOP23527 126 aa3.97□□□□□ -1.77
SHC4-206ENST00000559289 HIST1H2BBP33778 126 aa3.97□□□□□ -1.77
SHC4-206ENST00000559289 HIST1H2BDP58876 126 aa3.97□□□□□ -1.77
SHC4-206ENST00000559289 SEC61GP60059 68 aa3.97□□□□□ -1.77
SHC4-206ENST00000559289 SNRPEP62304 92 aaKnown RBP3.97□□□□□ -1.77
SHC4-206ENST00000559289 HIST1H2BCP62807 126 aa3.97□□□□□ -1.77
SHC4-206ENST00000559289 HIST2H2BEQ16778 126 aa3.97□□□□□ -1.77
SHC4-206ENST00000559289 ORMDL2Q53FV1 153 aa3.97□□□□□ -1.77
SHC4-206ENST00000559289 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.97□□□□□ -1.77
SHC4-206ENST00000559289 KRTAP26-1Q6PEX3 210 aa3.97□□□□□ -1.77
SHC4-206ENST00000559289 C2orf66Q6UXQ4 117 aa3.97□□□□□ -1.77
SHC4-206ENST00000559289 Q6ZUT4 128 aa3.97□□□□□ -1.77
SHC4-206ENST00000559289 FA2HQ7L5A8 372 aa3.97□□□□□ -1.77
SHC4-206ENST00000559289 HIST1H2BHQ93079 126 aa3.97□□□□□ -1.77
SHC4-206ENST00000559289 TOMM6Q96B49 74 aa3.97□□□□□ -1.77
SHC4-206ENST00000559289 HIST1H2BNQ99877 126 aa3.97□□□□□ -1.77
SHC4-206ENST00000559289 HIST1H2BMQ99879 126 aa3.97□□□□□ -1.77
SHC4-206ENST00000559289 OPRPNQ99935 248 aaPredicted RBP3.97□□□□□ -1.77
SHC4-206ENST00000559289 TIMM21Q9BVV7 248 aa3.97□□□□□ -1.77
SHC4-206ENST00000559289 KRTAP4-5Q9BYR2 181 aa3.97□□□□□ -1.77
SHC4-206ENST00000559289 CDC42SE2Q9NRR3 84 aa3.97□□□□□ -1.77
SHC4-206ENST00000559289 AP5S1Q9NUS5 200 aa3.97□□□□□ -1.77
SHC4-206ENST00000559289 PRR34Q9NV39 138 aa3.97□□□□□ -1.77
SHC4-206ENST00000559289 CSDC2Q9Y534 153 aaKnown RBP3.97□□□□□ -1.77
SHC4-206ENST00000559289 RYR3Q15413 4870 aa3.97□□□□□ -1.77
SHC4-206ENST00000559289 IGLV4-3A0A075B6K6 122 aa3.96□□□□□ -1.78
SHC4-206ENST00000559289 A0A0U1RRA0 63 aa3.96□□□□□ -1.78
SHC4-206ENST00000559289 IGIPA6NJ69 53 aa3.96□□□□□ -1.78
SHC4-206ENST00000559289 SERF1AO75920 110 aa3.96□□□□□ -1.78
SHC4-206ENST00000559289 ZNF25P17030 456 aaPredicted RBP3.96□□□□□ -1.78
SHC4-206ENST00000559289 PKIAP61925 76 aa3.96□□□□□ -1.78
SHC4-206ENST00000559289 PMCHL1Q16048 86 aa3.96□□□□□ -1.78
SHC4-206ENST00000559289 RNASE13Q5GAN3 156 aaKnown RBP3.96□□□□□ -1.78
SHC4-206ENST00000559289 TTC32Q5I0X7 151 aa3.96□□□□□ -1.78
SHC4-206ENST00000559289 RNASEKQ6P5S7 137 aaKnown RBP3.96□□□□□ -1.78
SHC4-206ENST00000559289 CLPSL2Q6UWE3 100 aa3.96□□□□□ -1.78
SHC4-206ENST00000559289 LINC00173Q6ZV60 143 aa3.96□□□□□ -1.78
SHC4-206ENST00000559289 LINC00518Q8N0U6 118 aa3.96□□□□□ -1.78
SHC4-206ENST00000559289 LINC00269Q8N2A0 174 aa3.96□□□□□ -1.78
SHC4-206ENST00000559289 C10orf126Q8N4M7 172 aa3.96□□□□□ -1.78
SHC4-206ENST00000559289 MAPKAPK5-AS1Q8N8E1 139 aa3.96□□□□□ -1.78
SHC4-206ENST00000559289 SPANXA1Q9NS26 97 aa3.96□□□□□ -1.78
SHC4-206ENST00000559289 CYSLTR1Q9Y271 337 aa3.96□□□□□ -1.78
SHC4-206ENST00000559289 PYGO1Q9Y3Y4 419 aa3.96□□□□□ -1.78
SHC4-206ENST00000559289 FAT2Q9NYQ8 4349 aa3.96□□□□□ -1.78
SHC4-206ENST00000559289 TRAV9-2A0A087WT02 112 aa3.95□□□□□ -1.78
SHC4-206ENST00000559289 G0S2P27469 103 aa3.95□□□□□ -1.78
SHC4-206ENST00000559289 NDUFA6P56556 154 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms