RNA–Protein interactions for RNA: ENST00000559100.1

GABPB1-209, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-209ENST00000559100 TRAV22A0A0B4J277 110 aa0.5□□□□□ -2.33
GABPB1-209ENST00000559100 A0A0D9SFI3 127 aa0.5□□□□□ -2.33
GABPB1-209ENST00000559100 GNGT2O14610 69 aa0.5□□□□□ -2.33
GABPB1-209ENST00000559100 UBA52P62987 128 aaKnown RBP0.5□□□□□ -2.33
GABPB1-209ENST00000559100 SEC11AP67812 179 aa0.5□□□□□ -2.33
GABPB1-209ENST00000559100 ACBD7Q8N6N7 88 aa0.5□□□□□ -2.33
GABPB1-209ENST00000559100 PRO1854Q9UHT4 67 aa0.5□□□□□ -2.33
GABPB1-209ENST00000559100 LINC01558Q9Y6Z2 57 aa0.5□□□□□ -2.33
GABPB1-209ENST00000559100 NAV3Q8IVL0 2385 aa0.49□□□□□ -2.33
GABPB1-209ENST00000559100 hADV29S1A0JD25 119 aa0.49□□□□□ -2.33
GABPB1-209ENST00000559100 MGPP08493 103 aa0.49□□□□□ -2.33
GABPB1-209ENST00000559100 IGLC1P0CG04 106 aa0.49□□□□□ -2.33
GABPB1-209ENST00000559100 Q6JHZ5 121 aa0.49□□□□□ -2.33
GABPB1-209ENST00000559100 SPINK6Q6UWN8 80 aa0.49□□□□□ -2.33
GABPB1-209ENST00000559100 KRTAP19-3Q7Z4W3 81 aa0.49□□□□□ -2.33
GABPB1-209ENST00000559100 FAM167A-AS1Q96KT0 104 aa0.49□□□□□ -2.33
GABPB1-209ENST00000559100 AMELXQ99217 191 aa0.49□□□□□ -2.33
GABPB1-209ENST00000559100 MUC5BQ9HC84 5762 aaPredicted RBP0.49□□□□□ -2.33
GABPB1-209ENST00000559100 MYO7AQ13402 2215 aa0.49□□□□□ -2.33
GABPB1-209ENST00000559100 CNTLNQ9NXG0 1405 aa0.48□□□□□ -2.33
GABPB1-209ENST00000559100 M0R143 59 aa0.48□□□□□ -2.33
GABPB1-209ENST00000559100 M0R3E3 92 aa0.48□□□□□ -2.33
GABPB1-209ENST00000559100 LINC00032P0C843 101 aa0.48□□□□□ -2.33
GABPB1-209ENST00000559100 NCMAPQ5T1S8 102 aa0.48□□□□□ -2.33
GABPB1-209ENST00000559100 FAM223AQ8IWN6 122 aa0.48□□□□□ -2.33
GABPB1-209ENST00000559100 FDCSPQ8NFU4 85 aa0.48□□□□□ -2.33
GABPB1-209ENST00000559100 CDC42SE2Q9NRR3 84 aa0.48□□□□□ -2.33
GABPB1-209ENST00000559100 UNC13BO14795 1591 aa0.48□□□□□ -2.33
GABPB1-209ENST00000559100 CADP27708 2225 aa0.48□□□□□ -2.33
GABPB1-209ENST00000559100 KDM5AP29375 1690 aaKnown RBP0.47□□□□□ -2.33
GABPB1-209ENST00000559100 A0A1B0GWA3 101 aa0.47□□□□□ -2.33
GABPB1-209ENST00000559100 S100A8P05109 93 aa0.47□□□□□ -2.33
GABPB1-209ENST00000559100 UBE2D3P61077 147 aa0.47□□□□□ -2.33
GABPB1-209ENST00000559100 UBE2D2P62837 147 aa0.47□□□□□ -2.33
GABPB1-209ENST00000559100 PMCHL2Q9BQD1 86 aa0.47□□□□□ -2.33
GABPB1-209ENST00000559100 VAMP8Q9BV40 100 aa0.47□□□□□ -2.33
GABPB1-209ENST00000559100 PRO0255Q9UI72 69 aa0.47□□□□□ -2.33
GABPB1-209ENST00000559100 ERCC6L2Q5T890 1561 aa0.47□□□□□ -2.33
GABPB1-209ENST00000559100 ZFYVE16Q7Z3T8 1539 aa0.47□□□□□ -2.33
GABPB1-209ENST00000559100 PSME4Q14997 1843 aa0.47□□□□□ -2.33
GABPB1-209ENST00000559100 TCHHQ07283 1943 aa0.46□□□□□ -2.34
GABPB1-209ENST00000559100 CC2D2AQ9P2K1 1620 aa0.46□□□□□ -2.34
GABPB1-209ENST00000559100 NDUFC1O43677 76 aa0.46□□□□□ -2.34
GABPB1-209ENST00000559100 COL5A1-AS1Q5SY13 56 aa0.46□□□□□ -2.34
GABPB1-209ENST00000559100 DPY30Q9C005 99 aa0.46□□□□□ -2.34
GABPB1-209ENST00000559100 SPCS1Q9Y6A9 102 aa0.46□□□□□ -2.34
GABPB1-209ENST00000559100 SPHKAPQ2M3C7 1700 aa0.46□□□□□ -2.34
GABPB1-209ENST00000559100 SHANK2Q9UPX8 1470 aa0.46□□□□□ -2.34
GABPB1-209ENST00000559100 KIF21AQ7Z4S6 1674 aa0.46□□□□□ -2.34
GABPB1-209ENST00000559100 BDP1A6H8Y1 2624 aa0.46□□□□□ -2.34
GABPB1-209ENST00000559100 ABCC5O15440 1437 aa0.46□□□□□ -2.34
GABPB1-209ENST00000559100 SHROOM2Q13796 1616 aa0.46□□□□□ -2.34
GABPB1-209ENST00000559100 ZNF236Q9UL36 1845 aa0.45□□□□□ -2.34
GABPB1-209ENST00000559100 KCPQ6ZWJ8 1503 aa0.45□□□□□ -2.34
GABPB1-209ENST00000559100 LRRC37A2A6NM11 1700 aa0.45□□□□□ -2.34
GABPB1-209ENST00000559100 FXYD6-FXYD2A0A087WZ82 144 aa0.45□□□□□ -2.34
GABPB1-209ENST00000559100 A0A0G2JND7 137 aa0.45□□□□□ -2.34
GABPB1-209ENST00000559100 BCE1O60756 84 aa0.45□□□□□ -2.34
GABPB1-209ENST00000559100 MT-ATP8P03928 68 aa0.45□□□□□ -2.34
GABPB1-209ENST00000559100 SAA2P0DJI9 122 aaPredicted RBP0.45□□□□□ -2.34
GABPB1-209ENST00000559100 CNFNQ9BYD5 112 aa0.45□□□□□ -2.34
GABPB1-209ENST00000559100 CACFD1Q9UGQ2 172 aa0.45□□□□□ -2.34
GABPB1-209ENST00000559100 MUC5ACP98088 5654 aa0.44□□□□□ -2.34
GABPB1-209ENST00000559100 FAM223BA6NKX1 122 aa0.44□□□□□ -2.34
GABPB1-209ENST00000559100 ATOX1O00244 68 aa0.44□□□□□ -2.34
GABPB1-209ENST00000559100 MPC2O95563 127 aa0.44□□□□□ -2.34
GABPB1-209ENST00000559100 PRH1P02810 166 aa0.44□□□□□ -2.34
GABPB1-209ENST00000559100 TMEM263Q8WUH6 116 aaKnown RBP0.44□□□□□ -2.34
GABPB1-209ENST00000559100 PRO1933Q9H354 126 aa0.44□□□□□ -2.34
GABPB1-209ENST00000559100 LINC00472Q9H8W2 130 aa0.44□□□□□ -2.34
GABPB1-209ENST00000559100 EHBP1L1Q8N3D4 1523 aa0.43□□□□□ -2.34
GABPB1-209ENST00000559100 TTC28Q96AY4 2481 aa0.43□□□□□ -2.34
GABPB1-209ENST00000559100 MRC2Q9UBG0 1479 aa0.43□□□□□ -2.34
GABPB1-209ENST00000559100 TOP2BQ02880 1626 aa0.43□□□□□ -2.34
GABPB1-209ENST00000559100 CFDP00746 253 aaPredicted RBP0.43□□□□□ -2.34
GABPB1-209ENST00000559100 SPINK1P00995 79 aa0.43□□□□□ -2.34
GABPB1-209ENST00000559100 UQCRHP07919 91 aa0.43□□□□□ -2.34
GABPB1-209ENST00000559100 FAUP35544 74 aaKnown RBP0.43□□□□□ -2.34
GABPB1-209ENST00000559100 PKIAP61925 76 aa0.43□□□□□ -2.34
GABPB1-209ENST00000559100 PMCHL1Q16048 86 aa0.43□□□□□ -2.34
GABPB1-209ENST00000559100 PSMG4Q5JS54 123 aa0.43□□□□□ -2.34
GABPB1-209ENST00000559100 C10orf113Q5VZT2 155 aa0.43□□□□□ -2.34
GABPB1-209ENST00000559100 SMR3AQ99954 134 aa0.43□□□□□ -2.34
GABPB1-209ENST00000559100 TP53AIP1Q9HCN2 124 aa0.43□□□□□ -2.34
GABPB1-209ENST00000559100 HMGXB3Q12766 1538 aa0.43□□□□□ -2.34
GABPB1-209ENST00000559100 TET3O43151 1660 aa0.43□□□□□ -2.34
GABPB1-209ENST00000559100 MYOM1P52179 1685 aa0.43□□□□□ -2.34
GABPB1-209ENST00000559100 SBF2Q86WG5 1849 aa0.43□□□□□ -2.34
GABPB1-209ENST00000559100 ASXL3Q9C0F0 2248 aa0.42□□□□□ -2.34
GABPB1-209ENST00000559100 LRP6O75581 1613 aa0.42□□□□□ -2.34
GABPB1-209ENST00000559100 ZFHX3Q15911 3703 aa0.42□□□□□ -2.34
GABPB1-209ENST00000559100 POLQO75417 2590 aa0.42□□□□□ -2.34
GABPB1-209ENST00000559100 UQCRHLA0A096LP55 91 aa0.42□□□□□ -2.34
GABPB1-209ENST00000559100 ASIPP42127 132 aa0.42□□□□□ -2.34
GABPB1-209ENST00000559100 PIGYQ3MUY2 71 aa0.42□□□□□ -2.34
GABPB1-209ENST00000559100 Q5BKY6 102 aa0.42□□□□□ -2.34
GABPB1-209ENST00000559100 Q8IZM0 81 aa0.42□□□□□ -2.34
GABPB1-209ENST00000559100 LINC01600Q96MT4 127 aa0.42□□□□□ -2.34
GABPB1-209ENST00000559100 Q9H521 79 aa0.42□□□□□ -2.34
GABPB1-209ENST00000559100 WNK3Q9BYP7 1800 aa0.42□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms