RNA–Protein interactions for RNA: ENST00000558880.1

TRAF3-206, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 374 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-206ENST00000558880 VCYO14598 125 aa4.88□□□□□ -1.63
TRAF3-206ENST00000558880 TCAPO15273 167 aa4.88□□□□□ -1.63
TRAF3-206ENST00000558880 HIST1H2BKO60814 126 aa4.88□□□□□ -1.63
TRAF3-206ENST00000558880 HIST1H2BJP06899 126 aa4.88□□□□□ -1.63
TRAF3-206ENST00000558880 DNAH10OSP0CZ25 163 aa4.88□□□□□ -1.63
TRAF3-206ENST00000558880 HIST1H2BOP23527 126 aa4.88□□□□□ -1.63
TRAF3-206ENST00000558880 HIST1H2BBP33778 126 aa4.88□□□□□ -1.63
TRAF3-206ENST00000558880 HIST1H2BDP58876 126 aa4.88□□□□□ -1.63
TRAF3-206ENST00000558880 HIST1H2BCP62807 126 aa4.88□□□□□ -1.63
TRAF3-206ENST00000558880 HIST2H2BEQ16778 126 aa4.88□□□□□ -1.63
TRAF3-206ENST00000558880 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.88□□□□□ -1.63
TRAF3-206ENST00000558880 Q6ZR54 194 aa4.88□□□□□ -1.63
TRAF3-206ENST00000558880 SH2D6Q7Z4S9 175 aa4.88□□□□□ -1.63
TRAF3-206ENST00000558880 NIT1Q86X76 327 aa4.88□□□□□ -1.63
TRAF3-206ENST00000558880 Q8N8P6 123 aa4.88□□□□□ -1.63
TRAF3-206ENST00000558880 HIST1H2BHQ93079 126 aa4.88□□□□□ -1.63
TRAF3-206ENST00000558880 HIST1H2BNQ99877 126 aa4.88□□□□□ -1.63
TRAF3-206ENST00000558880 HIST1H2BMQ99879 126 aa4.88□□□□□ -1.63
TRAF3-206ENST00000558880 HECTD4Q9Y4D8 3996 aa4.88□□□□□ -1.63
TRAF3-206ENST00000558880 PKD1P98161 4303 aa4.88□□□□□ -1.63
TRAF3-206ENST00000558880 LRP1BQ9NZR2 4599 aa4.87□□□□□ -1.63
TRAF3-206ENST00000558880 IGLV4-60A0A075B6I1 120 aa4.87□□□□□ -1.63
TRAF3-206ENST00000558880 PPP1R17O96001 155 aa4.87□□□□□ -1.63
TRAF3-206ENST00000558880 Q0VG73 95 aa4.87□□□□□ -1.63
TRAF3-206ENST00000558880 MPV17L2Q567V2 206 aa4.87□□□□□ -1.63
TRAF3-206ENST00000558880 C20orf203Q8NBC4 194 aa4.87□□□□□ -1.63
TRAF3-206ENST00000558880 Q9H8V8 135 aa4.87□□□□□ -1.63
TRAF3-206ENST00000558880 DNAH8Q96JB1 4490 aa4.87□□□□□ -1.63
TRAF3-206ENST00000558880 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.86□□□□□ -1.63
TRAF3-206ENST00000558880 IGHV1-24A0A0C4DH33 117 aa4.86□□□□□ -1.63
TRAF3-206ENST00000558880 IGKV2-29A2NJV5 120 aaPredicted RBP4.86□□□□□ -1.63
TRAF3-206ENST00000558880 PMCHP20382 165 aa4.86□□□□□ -1.63
TRAF3-206ENST00000558880 CCL18P55774 89 aa4.86□□□□□ -1.63
TRAF3-206ENST00000558880 RPL39P62891 51 aaKnown RBP4.86□□□□□ -1.63
TRAF3-206ENST00000558880 COTL1Q14019 142 aa4.86□□□□□ -1.63
TRAF3-206ENST00000558880 LINC01556Q5JQF7 62 aa4.86□□□□□ -1.63
TRAF3-206ENST00000558880 Q8N976 141 aa4.86□□□□□ -1.63
TRAF3-206ENST00000558880 MAP1LC3AQ9H492 121 aa4.86□□□□□ -1.63
TRAF3-206ENST00000558880 UBE2D4Q9Y2X8 147 aa4.86□□□□□ -1.63
TRAF3-206ENST00000558880 IGIPA6NJ69 53 aa4.85□□□□□ -1.63
TRAF3-206ENST00000558880 RBX1P62877 108 aa4.85□□□□□ -1.63
TRAF3-206ENST00000558880 GAGE6Q13070 117 aa4.85□□□□□ -1.63
TRAF3-206ENST00000558880 COA6Q5JTJ3 125 aaKnown RBP4.85□□□□□ -1.63
TRAF3-206ENST00000558880 KRTAP26-1Q6PEX3 210 aa4.85□□□□□ -1.63
TRAF3-206ENST00000558880 MRPL52Q86TS9 123 aaKnown RBP4.85□□□□□ -1.63
TRAF3-206ENST00000558880 OPRPNQ99935 248 aaPredicted RBP4.85□□□□□ -1.63
TRAF3-206ENST00000558880 TRBV25-1A0A075B6N4 114 aa4.84□□□□□ -1.63
TRAF3-206ENST00000558880 A0A1B0GUV1 79 aa4.84□□□□□ -1.63
TRAF3-206ENST00000558880 SIVA1O15304 175 aa4.84□□□□□ -1.63
TRAF3-206ENST00000558880 SERF1AO75920 110 aa4.84□□□□□ -1.63
TRAF3-206ENST00000558880 LINC00614P0C842 121 aa4.84□□□□□ -1.63
TRAF3-206ENST00000558880 FGF6P10767 208 aa4.84□□□□□ -1.63
TRAF3-206ENST00000558880 AMTP48728 403 aa4.84□□□□□ -1.63
TRAF3-206ENST00000558880 PMCHL1Q16048 86 aa4.84□□□□□ -1.63
TRAF3-206ENST00000558880 TMEM97Q5BJF2 176 aa4.84□□□□□ -1.63
TRAF3-206ENST00000558880 ENHOQ6UWT2 76 aa4.84□□□□□ -1.63
TRAF3-206ENST00000558880 Q6ZRN7 208 aaPredicted RBP4.84□□□□□ -1.63
TRAF3-206ENST00000558880 LINC00173Q6ZV60 143 aa4.84□□□□□ -1.63
TRAF3-206ENST00000558880 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.84□□□□□ -1.63
TRAF3-206ENST00000558880 TMEM243Q9BU79 118 aa4.84□□□□□ -1.63
TRAF3-206ENST00000558880 NXT2Q9NPJ8 142 aaKnown RBP4.84□□□□□ -1.63
TRAF3-206ENST00000558880 PRR34Q9NV39 138 aa4.84□□□□□ -1.63
TRAF3-206ENST00000558880 PKHD1P08F94 4074 aa4.84□□□□□ -1.64
TRAF3-206ENST00000558880 NBDYA0A0U1RRE5 68 aa4.83□□□□□ -1.64
TRAF3-206ENST00000558880 IBA57-AS1B1ANH7 110 aa4.83□□□□□ -1.64
TRAF3-206ENST00000558880 K7EMI3 77 aa4.83□□□□□ -1.64
TRAF3-206ENST00000558880 IGHV3-30P01768 117 aa4.83□□□□□ -1.64
TRAF3-206ENST00000558880 IGHV3-33P01772 117 aa4.83□□□□□ -1.64
TRAF3-206ENST00000558880 NPSP0C0P6 89 aa4.83□□□□□ -1.64
TRAF3-206ENST00000558880 IGHV3-30-3P0DP02 117 aa4.83□□□□□ -1.64
TRAF3-206ENST00000558880 IGHV3-30-5P0DP03 117 aa4.83□□□□□ -1.64
TRAF3-206ENST00000558880 LAGE3Q14657 143 aa4.83□□□□□ -1.64
TRAF3-206ENST00000558880 PDZD11Q5EBL8 140 aa4.83□□□□□ -1.64
TRAF3-206ENST00000558880 ZC2HC1BQ5TFG8 222 aa4.83□□□□□ -1.64
TRAF3-206ENST00000558880 MAPKAPK5-AS1Q8N8E1 139 aa4.83□□□□□ -1.64
TRAF3-206ENST00000558880 KIR2DL4Q99706 377 aa4.83□□□□□ -1.64
TRAF3-206ENST00000558880 CHCHD5Q9BSY4 110 aa4.83□□□□□ -1.64
TRAF3-206ENST00000558880 CDC42SE2Q9NRR3 84 aa4.83□□□□□ -1.64
TRAF3-206ENST00000558880 CSDC2Q9Y534 153 aaKnown RBP4.83□□□□□ -1.64
TRAF3-206ENST00000558880 IGLV4-3A0A075B6K6 122 aa4.82□□□□□ -1.64
TRAF3-206ENST00000558880 TRAV8-6A0A0B4J262 113 aa4.82□□□□□ -1.64
TRAF3-206ENST00000558880 IFITM10A6NMD0 228 aa4.82□□□□□ -1.64
TRAF3-206ENST00000558880 H7C423 109 aa4.82□□□□□ -1.64
TRAF3-206ENST00000558880 FCER1GP30273 86 aa4.82□□□□□ -1.64
TRAF3-206ENST00000558880 KRTAP5-3Q6L8H2 238 aa4.82□□□□□ -1.64
TRAF3-206ENST00000558880 C2orf66Q6UXQ4 117 aa4.82□□□□□ -1.64
TRAF3-206ENST00000558880 Q6ZUT4 128 aa4.82□□□□□ -1.64
TRAF3-206ENST00000558880 FAM19A2Q8N3H0 131 aa4.82□□□□□ -1.64
TRAF3-206ENST00000558880 PRSS3P2Q8NHM4 247 aa4.82□□□□□ -1.64
TRAF3-206ENST00000558880 TOMM6Q96B49 74 aa4.82□□□□□ -1.64
TRAF3-206ENST00000558880 TIMM21Q9BVV7 248 aa4.82□□□□□ -1.64
TRAF3-206ENST00000558880 PYGO1Q9Y3Y4 419 aa4.82□□□□□ -1.64
TRAF3-206ENST00000558880 APOBP04114 4563 aaKnown RBP4.81□□□□□ -1.64
TRAF3-206ENST00000558880 M0R2N4 97 aa4.81□□□□□ -1.64
TRAF3-206ENST00000558880 RTL8CO15255 209 aa4.81□□□□□ -1.64
TRAF3-206ENST00000558880 MRPS36P82909 103 aaKnown RBP4.81□□□□□ -1.64
TRAF3-206ENST00000558880 RNASE13Q5GAN3 156 aaKnown RBP4.81□□□□□ -1.64
TRAF3-206ENST00000558880 UBE2DNLQ8IWF7 75 aa4.81□□□□□ -1.64
TRAF3-206ENST00000558880 CHCHD1Q96BP2 118 aaKnown RBP4.81□□□□□ -1.64
TRAF3-206ENST00000558880 AMELXQ99217 191 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms