RNA–Protein interactions for RNA: ENST00000558787.1

MARK3-215, Transcript of microtubule affinity regulating kinase 3, human

TSL 2

Gene MARK3, Length 758 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MARK3-215	ENST00000558787	MRAP2	Q96G30	205 aa		4.62	□□□□□ -1.67
MARK3-215	ENST00000558787	KIF25-AS1	Q9Y6Z4	181 aa		4.62	□□□□□ -1.67
MARK3-215	ENST00000558787	IGLV2-33	A0A075B6J2	118 aa	Predicted RBP	4.61	□□□□□ -1.67
MARK3-215	ENST00000558787		F5H697	171 aa		4.61	□□□□□ -1.67
MARK3-215	ENST00000558787	PPP1R17	O96001	155 aa		4.61	□□□□□ -1.67
MARK3-215	ENST00000558787	MGP	P08493	103 aa		4.61	□□□□□ -1.67
MARK3-215	ENST00000558787	RPS10	P46783	165 aa	Known RBP	4.61	□□□□□ -1.67
MARK3-215	ENST00000558787	ZNF56	Q15929	161 aa		4.61	□□□□□ -1.67
MARK3-215	ENST00000558787	AMN1	Q8IY45	258 aa		4.61	□□□□□ -1.67
MARK3-215	ENST00000558787	TMEM70	Q9BUB7	260 aa		4.61	□□□□□ -1.67
MARK3-215	ENST00000558787	TM2D2	Q9BX73	214 aa		4.61	□□□□□ -1.67
MARK3-215	ENST00000558787	TRAPPC1	Q9Y5R8	145 aa		4.61	□□□□□ -1.67
MARK3-215	ENST00000558787	TRBV10-1	A0A0K0K1A3	114 aa		4.6	□□□□□ -1.67
MARK3-215	ENST00000558787	KRTAP29-1	A8MX34	341 aa	Predicted RBP	4.6	□□□□□ -1.67
MARK3-215	ENST00000558787	RAB4A	P20338	218 aa		4.6	□□□□□ -1.67
MARK3-215	ENST00000558787	CKS2	P33552	79 aa		4.6	□□□□□ -1.67
MARK3-215	ENST00000558787	FABP9	Q0Z7S8	132 aa		4.6	□□□□□ -1.67
MARK3-215	ENST00000558787	LAGE3	Q14657	143 aa		4.6	□□□□□ -1.67
MARK3-215	ENST00000558787	MRPL51	Q4U2R6	128 aa	Known RBP	4.6	□□□□□ -1.67
MARK3-215	ENST00000558787	NIT1	Q86X76	327 aa		4.6	□□□□□ -1.67
MARK3-215	ENST00000558787	ORMDL3	Q8N138	153 aa		4.6	□□□□□ -1.67
MARK3-215	ENST00000558787	RNF185	Q96GF1	192 aa		4.6	□□□□□ -1.67
MARK3-215	ENST00000558787	KLK12	Q9UKR0	248 aa		4.6	□□□□□ -1.67
MARK3-215	ENST00000558787	LAMTOR2	Q9Y2Q5	125 aa		4.6	□□□□□ -1.67
MARK3-215	ENST00000558787	IGKV2D-24	A0A075B6R9	120 aa		4.59	□□□□□ -1.67
MARK3-215	ENST00000558787	TRAV8-3	A0A0A6YYJ7	113 aa		4.59	□□□□□ -1.67
MARK3-215	ENST00000558787		M0QY20	66 aa		4.59	□□□□□ -1.67
MARK3-215	ENST00000558787	PHOX2A	O14813	284 aa		4.59	□□□□□ -1.67
MARK3-215	ENST00000558787	SUMO4	Q6EEV6	95 aa		4.59	□□□□□ -1.67
MARK3-215	ENST00000558787	SREK1IP1	Q8N9Q2	155 aa	Predicted RBP	4.59	□□□□□ -1.67
MARK3-215	ENST00000558787	TRAV26-2	A0A0B4J265	109 aa		4.58	□□□□□ -1.68
MARK3-215	ENST00000558787		D6R8Y8	96 aa		4.58	□□□□□ -1.68
MARK3-215	ENST00000558787	TRGC2	P03986	189 aa		4.58	□□□□□ -1.68
MARK3-215	ENST00000558787	UBE2D3	P61077	147 aa		4.58	□□□□□ -1.68
MARK3-215	ENST00000558787	UBE2D2	P62837	147 aa		4.58	□□□□□ -1.68
MARK3-215	ENST00000558787	UBE2W	Q96B02	151 aa		4.58	□□□□□ -1.68
MARK3-215	ENST00000558787	PRELID3A	Q96N28	172 aa		4.58	□□□□□ -1.68
MARK3-215	ENST00000558787	NIT2	Q9NQR4	276 aa		4.58	□□□□□ -1.68
MARK3-215	ENST00000558787		A0A087WX48	190 aa		4.57	□□□□□ -1.68
MARK3-215	ENST00000558787	TRBV6-5	A0A0K0K1A5	114 aa		4.57	□□□□□ -1.68
MARK3-215	ENST00000558787	C1orf196	B1AJZ1	125 aa		4.57	□□□□□ -1.68
MARK3-215	ENST00000558787	TMEM262	E9PQX1	116 aa		4.57	□□□□□ -1.68
MARK3-215	ENST00000558787	TNFRSF6B	O95407	300 aa		4.57	□□□□□ -1.68
MARK3-215	ENST00000558787	NCR2	O95944	276 aa		4.57	□□□□□ -1.68
MARK3-215	ENST00000558787	RPL32	P62910	135 aa	Known RBP	4.57	□□□□□ -1.68
MARK3-215	ENST00000558787	RPL36A	P83881	106 aa	Known RBP	4.57	□□□□□ -1.68
MARK3-215	ENST00000558787		Q6ZSA8	131 aa		4.57	□□□□□ -1.68
MARK3-215	ENST00000558787	NRAC	Q8N912	160 aa		4.57	□□□□□ -1.68
MARK3-215	ENST00000558787	RPL36AL	Q969Q0	106 aa	Known RBP	4.57	□□□□□ -1.68
MARK3-215	ENST00000558787	C20orf78	Q9BR46	151 aa		4.57	□□□□□ -1.68
MARK3-215	ENST00000558787	ALKBH7	Q9BT30	221 aa	Predicted RBP	4.57	□□□□□ -1.68
MARK3-215	ENST00000558787	MAP1LC3A	Q9H492	121 aa		4.57	□□□□□ -1.68
MARK3-215	ENST00000558787	ST20	Q9HBF5	79 aa		4.57	□□□□□ -1.68
MARK3-215	ENST00000558787	LRP1	Q07954	4544 aa	Known RBP	4.56	□□□□□ -1.68
MARK3-215	ENST00000558787	TRBV7-3	A0A075B6L6	115 aa		4.56	□□□□□ -1.68
MARK3-215	ENST00000558787	PRSS47	A8MTI9	375 aa		4.56	□□□□□ -1.68
MARK3-215	ENST00000558787	SMKR1	H3BMG3	65 aa		4.56	□□□□□ -1.68
MARK3-215	ENST00000558787	TCAP	O15273	167 aa		4.56	□□□□□ -1.68
MARK3-215	ENST00000558787	SUMO2	P61956	95 aa	Known RBP	4.56	□□□□□ -1.68
MARK3-215	ENST00000558787	KIAA1644	Q3SXP7	199 aa		4.56	□□□□□ -1.68
MARK3-215	ENST00000558787	ENHO	Q6UWT2	76 aa		4.56	□□□□□ -1.68
MARK3-215	ENST00000558787	SCX	Q7RTU7	201 aa		4.56	□□□□□ -1.68
MARK3-215	ENST00000558787		Q8N976	141 aa		4.56	□□□□□ -1.68
MARK3-215	ENST00000558787	NEXN-AS1	Q8NBZ9	246 aa		4.56	□□□□□ -1.68
MARK3-215	ENST00000558787	RMI2	Q96E14	147 aa		4.56	□□□□□ -1.68
MARK3-215	ENST00000558787	TRBV6-8	A0A0A6YYG3	113 aa		4.55	□□□□□ -1.68
MARK3-215	ENST00000558787	SDHAF1	A6NFY7	115 aa		4.55	□□□□□ -1.68
MARK3-215	ENST00000558787		K7EMI3	77 aa		4.55	□□□□□ -1.68
MARK3-215	ENST00000558787	VCY	O14598	125 aa		4.55	□□□□□ -1.68
MARK3-215	ENST00000558787	NPY	P01303	97 aa		4.55	□□□□□ -1.68
MARK3-215	ENST00000558787	PMCH	P20382	165 aa		4.55	□□□□□ -1.68
MARK3-215	ENST00000558787	RAB5B	P61020	215 aa		4.55	□□□□□ -1.68
MARK3-215	ENST00000558787	MPV17L2	Q567V2	206 aa		4.55	□□□□□ -1.68
MARK3-215	ENST00000558787	TMEM97	Q5BJF2	176 aa		4.55	□□□□□ -1.68
MARK3-215	ENST00000558787	NTM-AS1	Q6ZSK4	140 aa		4.55	□□□□□ -1.68
MARK3-215	ENST00000558787	RPL39L	Q96EH5	51 aa	Known RBP	4.55	□□□□□ -1.68
MARK3-215	ENST00000558787	KIR2DL4	Q99706	377 aa		4.55	□□□□□ -1.68
MARK3-215	ENST00000558787	NXT2	Q9NPJ8	142 aa	Known RBP	4.55	□□□□□ -1.68
MARK3-215	ENST00000558787	TRBV27	A0A0K0K1C4	114 aa		4.54	□□□□□ -1.68
MARK3-215	ENST00000558787		I3L3M4	83 aa		4.54	□□□□□ -1.68
MARK3-215	ENST00000558787	TRIAP1	O43715	76 aa		4.54	□□□□□ -1.68
MARK3-215	ENST00000558787	GAS8-AS1	O95177	125 aa		4.54	□□□□□ -1.68
MARK3-215	ENST00000558787	POLR2K	P53803	58 aa	Known RBP	4.54	□□□□□ -1.68
MARK3-215	ENST00000558787		Q0VG73	95 aa		4.54	□□□□□ -1.68
MARK3-215	ENST00000558787	GAGE6	Q13070	117 aa		4.54	□□□□□ -1.68
MARK3-215	ENST00000558787	CLPSL2	Q6UWE3	100 aa		4.54	□□□□□ -1.68
MARK3-215	ENST00000558787		Q8N8P6	123 aa		4.54	□□□□□ -1.68
MARK3-215	ENST00000558787	PRSS3P2	Q8NHM4	247 aa		4.54	□□□□□ -1.68
MARK3-215	ENST00000558787	CIRBP-AS1	Q8TBR5	109 aa		4.54	□□□□□ -1.68
MARK3-215	ENST00000558787	C18orf32	Q8TCD1	76 aa		4.54	□□□□□ -1.68
MARK3-215	ENST00000558787	DEFB104A	Q8WTQ1	72 aa		4.54	□□□□□ -1.68
MARK3-215	ENST00000558787	CHCHD5	Q9BSY4	110 aa		4.54	□□□□□ -1.68
MARK3-215	ENST00000558787	CHAC1	Q9BUX1	264 aa		4.54	□□□□□ -1.68
MARK3-215	ENST00000558787	SMIM2	Q9BVW6	85 aa		4.54	□□□□□ -1.68
MARK3-215	ENST00000558787	LOC389332	A0A1B0GUA5	103 aa		4.53	□□□□□ -1.68
MARK3-215	ENST00000558787	USP17L23	D6RBM5	183 aa		4.53	□□□□□ -1.68
MARK3-215	ENST00000558787	HIST1H2BK	O60814	126 aa		4.53	□□□□□ -1.68
MARK3-215	ENST00000558787	ANG	P03950	147 aa	Known RBP	4.53	□□□□□ -1.68
MARK3-215	ENST00000558787	HIST1H2BJ	P06899	126 aa		4.53	□□□□□ -1.68
MARK3-215	ENST00000558787	HIST1H2BO	P23527	126 aa		4.53	□□□□□ -1.68

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