RNA–Protein interactions for RNA: ENST00000558649.5

RABGGTA-206, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-206ENST00000558649 KRTAP10-1P60331 282 aa10.42□□□□□ -0.74
RABGGTA-206ENST00000558649 KIAA1644Q3SXP7 199 aa10.42□□□□□ -0.74
RABGGTA-206ENST00000558649 MRPL52Q86TS9 123 aaKnown RBP10.42□□□□□ -0.74
RABGGTA-206ENST00000558649 SVBPQ8N300 66 aa10.42□□□□□ -0.74
RABGGTA-206ENST00000558649 TMEM18Q96B42 140 aa10.42□□□□□ -0.74
RABGGTA-206ENST00000558649 LAMTOR2Q9Y2Q5 125 aa10.42□□□□□ -0.74
RABGGTA-206ENST00000558649 GAGE12HA6NDE8 117 aa10.41□□□□□ -0.74
RABGGTA-206ENST00000558649 RAB5AP20339 215 aa10.41□□□□□ -0.74
RABGGTA-206ENST00000558649 RPL39P62891 51 aaKnown RBP10.41□□□□□ -0.74
RABGGTA-206ENST00000558649 RNASE13Q5GAN3 156 aaKnown RBP10.41□□□□□ -0.74
RABGGTA-206ENST00000558649 ZNF664Q8N3J9 261 aa10.41□□□□□ -0.74
RABGGTA-206ENST00000558649 UBE2D4Q9Y2X8 147 aa10.41□□□□□ -0.74
RABGGTA-206ENST00000558649 DYNC1H1Q14204 4646 aaKnown RBP10.4□□□□□ -0.74
RABGGTA-206ENST00000558649 SMAGPQ0VAQ4 97 aa10.4□□□□□ -0.74
RABGGTA-206ENST00000558649 C14orf177Q52M58 125 aa10.4□□□□□ -0.74
RABGGTA-206ENST00000558649 CHCHD10Q8WYQ3 142 aaPredicted RBP10.4□□□□□ -0.74
RABGGTA-206ENST00000558649 CDC42SE2Q9NRR3 84 aa10.4□□□□□ -0.74
RABGGTA-206ENST00000558649 CDK2AP2O75956 126 aa10.39□□□□□ -0.75
RABGGTA-206ENST00000558649 LINC01620Q4KN68 170 aa10.39□□□□□ -0.75
RABGGTA-206ENST00000558649 Q6ZUT4 128 aa10.39□□□□□ -0.75
RABGGTA-206ENST00000558649 SLC7A5P1Q8MH63 180 aa10.39□□□□□ -0.75
RABGGTA-206ENST00000558649 GNB1LQ9BYB4 327 aa10.39□□□□□ -0.75
RABGGTA-206ENST00000558649 TGIF2-C20orf24A0A0A6YYL0 155 aa10.38□□□□□ -0.75
RABGGTA-206ENST00000558649 LINC00959A0A1B0GUT2 108 aa10.38□□□□□ -0.75
RABGGTA-206ENST00000558649 XCL1P47992 114 aa10.38□□□□□ -0.75
RABGGTA-206ENST00000558649 CCL25O15444 150 aa10.37□□□□□ -0.75
RABGGTA-206ENST00000558649 PRSS1P07477 247 aa10.37□□□□□ -0.75
RABGGTA-206ENST00000558649 SS18Q15532 418 aa10.37□□□□□ -0.75
RABGGTA-206ENST00000558649 Q8N8P6 123 aa10.37□□□□□ -0.75
RABGGTA-206ENST00000558649 KIAA1109Q2LD37 5005 aa10.36□□□□□ -0.75
RABGGTA-206ENST00000558649 hDV102S1A0JD36 115 aa10.36□□□□□ -0.75
RABGGTA-206ENST00000558649 PRSS47A8MTI9 375 aa10.36□□□□□ -0.75
RABGGTA-206ENST00000558649 COX19Q49B96 90 aa10.36□□□□□ -0.75
RABGGTA-206ENST00000558649 TIMM21Q9BVV7 248 aa10.36□□□□□ -0.75
RABGGTA-206ENST00000558649 MRPL18Q9H0U6 180 aaKnown RBP10.36□□□□□ -0.75
RABGGTA-206ENST00000558649 CSDC2Q9Y534 153 aaKnown RBP10.36□□□□□ -0.75
RABGGTA-206ENST00000558649 MT-ND6P03923 174 aa10.35□□□□□ -0.75
RABGGTA-206ENST00000558649 IFI27P40305 119 aaPredicted RBP10.35□□□□□ -0.75
RABGGTA-206ENST00000558649 HAMPP81172 84 aa10.35□□□□□ -0.75
RABGGTA-206ENST00000558649 FABP9Q0Z7S8 132 aa10.35□□□□□ -0.75
RABGGTA-206ENST00000558649 OPRPNQ99935 248 aaPredicted RBP10.35□□□□□ -0.75
RABGGTA-206ENST00000558649 SPANXA1Q9NS26 97 aa10.35□□□□□ -0.75
RABGGTA-206ENST00000558649 DNAH5Q8TE73 4624 aa10.34□□□□□ -0.75
RABGGTA-206ENST00000558649 TRAV13-1A0A0B4J241 112 aa10.34□□□□□ -0.75
RABGGTA-206ENST00000558649 FOXI1Q12951 378 aa10.34□□□□□ -0.75
RABGGTA-206ENST00000558649 NXT2Q9NPJ8 142 aaKnown RBP10.34□□□□□ -0.75
RABGGTA-206ENST00000558649 HIGD2BQ4VC39 106 aa10.33□□□□□ -0.76
RABGGTA-206ENST00000558649 ORMDL2Q53FV1 153 aa10.33□□□□□ -0.76
RABGGTA-206ENST00000558649 C15orf56Q8N910 161 aa10.32□□□□□ -0.76
RABGGTA-206ENST00000558649 PRSS3P2Q8NHM4 247 aa10.32□□□□□ -0.76
RABGGTA-206ENST00000558649 ALKBH7Q9BT30 221 aaPredicted RBP10.32□□□□□ -0.76
RABGGTA-206ENST00000558649 CYSLTR1Q9Y271 337 aa10.32□□□□□ -0.76
RABGGTA-206ENST00000558649 TRAPPC1Q9Y5R8 145 aa10.32□□□□□ -0.76
RABGGTA-206ENST00000558649 LRP1BQ9NZR2 4599 aa10.31□□□□□ -0.76
RABGGTA-206ENST00000558649 C1orf196B1AJZ1 125 aa10.31□□□□□ -0.76
RABGGTA-206ENST00000558649 CFAP161Q6P656 301 aa10.31□□□□□ -0.76
RABGGTA-206ENST00000558649 C2orf66Q6UXQ4 117 aa10.31□□□□□ -0.76
RABGGTA-206ENST00000558649 AP5S1Q9NUS5 200 aa10.31□□□□□ -0.76
RABGGTA-206ENST00000558649 FAM30AQ9NZY2 134 aa10.31□□□□□ -0.76
RABGGTA-206ENST00000558649 IFITM10A6NMD0 228 aa10.3□□□□□ -0.76
RABGGTA-206ENST00000558649 XGP55808 180 aa10.3□□□□□ -0.76
RABGGTA-206ENST00000558649 MRPS36P82909 103 aaKnown RBP10.3□□□□□ -0.76
RABGGTA-206ENST00000558649 CD164L2Q6UWJ8 174 aa10.3□□□□□ -0.76
RABGGTA-206ENST00000558649 CBLN2Q8IUK8 224 aa10.3□□□□□ -0.76
RABGGTA-206ENST00000558649 FAM104AQ969W3 186 aa10.3□□□□□ -0.76
RABGGTA-206ENST00000558649 IGLV4-3A0A075B6K6 122 aa10.29□□□□□ -0.76
RABGGTA-206ENST00000558649 K7EMI3 77 aa10.29□□□□□ -0.76
RABGGTA-206ENST00000558649 MALP21145 153 aa10.28□□□□□ -0.76
RABGGTA-206ENST00000558649 TMEM141Q96I45 108 aa10.28□□□□□ -0.76
RABGGTA-206ENST00000558649 PYGO1Q9Y3Y4 419 aa10.28□□□□□ -0.76
RABGGTA-206ENST00000558649 COX7A2LO14548 114 aa10.27□□□□□ -0.77
RABGGTA-206ENST00000558649 FA2HQ7L5A8 372 aa10.27□□□□□ -0.77
RABGGTA-206ENST00000558649 KRTAP17-1Q9BYP8 105 aa10.27□□□□□ -0.77
RABGGTA-206ENST00000558649 SMCO4Q9NRQ5 59 aa10.27□□□□□ -0.77
RABGGTA-206ENST00000558649 HERC2O95714 4834 aa10.26□□□□□ -0.77
RABGGTA-206ENST00000558649 GVQW2A0A096LPI5 108 aaPredicted RBP10.26□□□□□ -0.77
RABGGTA-206ENST00000558649 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.26□□□□□ -0.77
RABGGTA-206ENST00000558649 IGHV1-58A0A0C4DH39 117 aa10.26□□□□□ -0.77
RABGGTA-206ENST00000558649 SLPIP03973 132 aa10.26□□□□□ -0.77
RABGGTA-206ENST00000558649 CNBPP62633 177 aaKnown RBP10.26□□□□□ -0.77
RABGGTA-206ENST00000558649 ZC2HC1BQ5TFG8 222 aa10.26□□□□□ -0.77
RABGGTA-206ENST00000558649 Q6ZN92 141 aa10.26□□□□□ -0.77
RABGGTA-206ENST00000558649 TEX43Q6ZNM6 134 aa10.26□□□□□ -0.77
RABGGTA-206ENST00000558649 C5orf38Q86SI9 138 aa10.26□□□□□ -0.77
RABGGTA-206ENST00000558649 LINC00526Q96FQ7 95 aa10.26□□□□□ -0.77
RABGGTA-206ENST00000558649 YPEL4Q96NS1 127 aa10.26□□□□□ -0.77
RABGGTA-206ENST00000558649 SMR3BP02814 79 aaPredicted RBP10.25□□□□□ -0.77
RABGGTA-206ENST00000558649 C9orf163Q8N9P6 203 aa10.25□□□□□ -0.77
RABGGTA-206ENST00000558649 G0S2P27469 103 aa10.24□□□□□ -0.77
RABGGTA-206ENST00000558649 Q6ZSA8 131 aa10.24□□□□□ -0.77
RABGGTA-206ENST00000558649 Q8N1X5 172 aa10.24□□□□□ -0.77
RABGGTA-206ENST00000558649 TOMM6Q96B49 74 aa10.24□□□□□ -0.77
RABGGTA-206ENST00000558649 C2orf88Q9BSF0 95 aa10.24□□□□□ -0.77
RABGGTA-206ENST00000558649 APOBP04114 4563 aaKnown RBP10.24□□□□□ -0.77
RABGGTA-206ENST00000558649 RYR1P21817 5038 aa10.24□□□□□ -0.77
RABGGTA-206ENST00000558649 IGIPA6NJ69 53 aa10.23□□□□□ -0.77
RABGGTA-206ENST00000558649 ZNF561-AS1K7EIQ3 104 aa10.23□□□□□ -0.77
RABGGTA-206ENST00000558649 C18orf32Q8TCD1 76 aa10.23□□□□□ -0.77
RABGGTA-206ENST00000558649 VCX2Q9H322 139 aa10.23□□□□□ -0.77
RABGGTA-206ENST00000558649 HSPG2P98160 4391 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms