RNA–Protein interactions for RNA: ENST00000558500.5

LRRC28-207, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-207ENST00000558500 TNFSF18Q9UNG2 199 aa3.99□□□□□ -1.77
LRRC28-207ENST00000558500 IGLV4-69A0A075B6H9 119 aa3.98□□□□□ -1.77
LRRC28-207ENST00000558500 LINC00959A0A1B0GUT2 108 aa3.98□□□□□ -1.77
LRRC28-207ENST00000558500 CCL25O15444 150 aa3.98□□□□□ -1.77
LRRC28-207ENST00000558500 APOMO95445 188 aa3.98□□□□□ -1.77
LRRC28-207ENST00000558500 LINC01547P58512 204 aaPredicted RBP3.98□□□□□ -1.77
LRRC28-207ENST00000558500 RPL18AQ02543 176 aaKnown RBP3.98□□□□□ -1.77
LRRC28-207ENST00000558500 ZNF726P1Q15940 193 aa3.98□□□□□ -1.77
LRRC28-207ENST00000558500 RNASEKQ6P5S7 137 aaKnown RBP3.98□□□□□ -1.77
LRRC28-207ENST00000558500 NUP35Q8NFH5 326 aa3.98□□□□□ -1.77
LRRC28-207ENST00000558500 OR5A1Q8NGJ0 315 aa3.98□□□□□ -1.77
LRRC28-207ENST00000558500 TSKUQ8WUA8 353 aa3.98□□□□□ -1.77
LRRC28-207ENST00000558500 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.97□□□□□ -1.77
LRRC28-207ENST00000558500 CTXND1A0A1B0GTU2 59 aa3.97□□□□□ -1.77
LRRC28-207ENST00000558500 IGKV2-29A2NJV5 120 aaPredicted RBP3.97□□□□□ -1.77
LRRC28-207ENST00000558500 A4D1N5 150 aa3.97□□□□□ -1.77
LRRC28-207ENST00000558500 H7C423 109 aa3.97□□□□□ -1.77
LRRC28-207ENST00000558500 VPREB1P12018 145 aa3.97□□□□□ -1.77
LRRC28-207ENST00000558500 NTF3P20783 257 aa3.97□□□□□ -1.77
LRRC28-207ENST00000558500 CD164L2Q6UWJ8 174 aa3.97□□□□□ -1.77
LRRC28-207ENST00000558500 CAMK2N2Q96S95 79 aa3.97□□□□□ -1.77
LRRC28-207ENST00000558500 TCEAL7Q9BRU2 100 aa3.97□□□□□ -1.77
LRRC28-207ENST00000558500 AKR1C3P42330 323 aa3.96□□□□□ -1.78
LRRC28-207ENST00000558500 TPRXLQ17RH7 258 aa3.96□□□□□ -1.78
LRRC28-207ENST00000558500 C2orf48Q96LS8 159 aa3.96□□□□□ -1.78
LRRC28-207ENST00000558500 CCDC32Q9BV29 185 aa3.96□□□□□ -1.78
LRRC28-207ENST00000558500 RPP21Q9H633 154 aaKnown RBP3.96□□□□□ -1.78
LRRC28-207ENST00000558500 FAM168BA1KXE4 195 aa3.95□□□□□ -1.78
LRRC28-207ENST00000558500 NCR2O95944 276 aa3.95□□□□□ -1.78
LRRC28-207ENST00000558500 APCSP02743 223 aa3.95□□□□□ -1.78
LRRC28-207ENST00000558500 IGLC6P0CF74 106 aa3.95□□□□□ -1.78
LRRC28-207ENST00000558500 ZNF25P17030 456 aaPredicted RBP3.95□□□□□ -1.78
LRRC28-207ENST00000558500 FHITP49789 147 aa3.95□□□□□ -1.78
LRRC28-207ENST00000558500 SS18Q15532 418 aa3.95□□□□□ -1.78
LRRC28-207ENST00000558500 EIF5AL1Q6IS14 154 aaKnown RBP3.95□□□□□ -1.78
LRRC28-207ENST00000558500 BAGE2Q86Y30 109 aa3.95□□□□□ -1.78
LRRC28-207ENST00000558500 OCC1Q8TAD7 63 aa3.95□□□□□ -1.78
LRRC28-207ENST00000558500 STOML3Q8TAV4 291 aa3.95□□□□□ -1.78
LRRC28-207ENST00000558500 TMEM101Q96IK0 257 aa3.95□□□□□ -1.78
LRRC28-207ENST00000558500 OPRPNQ99935 248 aaPredicted RBP3.95□□□□□ -1.78
LRRC28-207ENST00000558500 RETNLBQ9BQ08 111 aa3.95□□□□□ -1.78
LRRC28-207ENST00000558500 TPPP3Q9BW30 176 aa3.95□□□□□ -1.78
LRRC28-207ENST00000558500 A0A087X002 238 aa3.94□□□□□ -1.78
LRRC28-207ENST00000558500 BCL2L11O43521 198 aa3.94□□□□□ -1.78
LRRC28-207ENST00000558500 S100A9P06702 114 aaKnown RBP3.94□□□□□ -1.78
LRRC28-207ENST00000558500 ESDP10768 282 aa3.94□□□□□ -1.78
LRRC28-207ENST00000558500 FAM19A5Q7Z5A7 132 aaPredicted RBP3.94□□□□□ -1.78
LRRC28-207ENST00000558500 BTF3L4Q96K17 158 aa3.94□□□□□ -1.78
LRRC28-207ENST00000558500 IGLV7-46A0A075B6I9 117 aa3.93□□□□□ -1.78
LRRC28-207ENST00000558500 C19orf71A6NCJ1 209 aa3.93□□□□□ -1.78
LRRC28-207ENST00000558500 INMT-MINDY4F8WBC2 141 aa3.93□□□□□ -1.78
LRRC28-207ENST00000558500 COX7A2LO14548 114 aa3.93□□□□□ -1.78
LRRC28-207ENST00000558500 SSNA1O43805 119 aa3.93□□□□□ -1.78
LRRC28-207ENST00000558500 ZNF861PO60384 105 aa3.93□□□□□ -1.78
LRRC28-207ENST00000558500 TRGC1P0CF51 173 aa3.93□□□□□ -1.78
LRRC28-207ENST00000558500 UBE2BP63146 152 aa3.93□□□□□ -1.78
LRRC28-207ENST00000558500 GAGE2EQ4V326 116 aa3.93□□□□□ -1.78
LRRC28-207ENST00000558500 GAGE2AQ6NT46 116 aa3.93□□□□□ -1.78
LRRC28-207ENST00000558500 GATD1Q8NB37 220 aa3.93□□□□□ -1.78
LRRC28-207ENST00000558500 OR2D3Q8NGH3 330 aa3.93□□□□□ -1.78
LRRC28-207ENST00000558500 TYMSOSQ8TAI1 123 aa3.93□□□□□ -1.78
LRRC28-207ENST00000558500 ENKURQ8TC29 256 aa3.93□□□□□ -1.78
LRRC28-207ENST00000558500 CDC42SE2Q9NRR3 84 aa3.93□□□□□ -1.78
LRRC28-207ENST00000558500 GAGE2DQ9UEU5 116 aa3.93□□□□□ -1.78
LRRC28-207ENST00000558500 MAP1LC3B2A6NCE7 125 aa3.92□□□□□ -1.78
LRRC28-207ENST00000558500 CRYGAP11844 174 aa3.92□□□□□ -1.78
LRRC28-207ENST00000558500 RPS20P60866 119 aaKnown RBP3.92□□□□□ -1.78
LRRC28-207ENST00000558500 RPL7L1Q6DKI1 246 aaKnown RBP3.92□□□□□ -1.78
LRRC28-207ENST00000558500 KRTAP7-1Q8IUC3 87 aa3.92□□□□□ -1.78
LRRC28-207ENST00000558500 RPL39LQ96EH5 51 aaKnown RBP3.92□□□□□ -1.78
LRRC28-207ENST00000558500 IMMP2LQ96T52 175 aa3.92□□□□□ -1.78
LRRC28-207ENST00000558500 MAP1LC3BQ9GZQ8 125 aa3.92□□□□□ -1.78
LRRC28-207ENST00000558500 SDHAF1A6NFY7 115 aa3.91□□□□□ -1.78
LRRC28-207ENST00000558500 C5orf52A6NGY3 159 aa3.91□□□□□ -1.78
LRRC28-207ENST00000558500 C1orf196B1AJZ1 125 aa3.91□□□□□ -1.78
LRRC28-207ENST00000558500 F2Z2F3 143 aa3.91□□□□□ -1.78
LRRC28-207ENST00000558500 G3V3Q6 166 aa3.91□□□□□ -1.78
LRRC28-207ENST00000558500 M0QXV9 152 aa3.91□□□□□ -1.78
LRRC28-207ENST00000558500 SPAG11BQ08648 103 aa3.91□□□□□ -1.78
LRRC28-207ENST00000558500 AKR1C8PQ5T2L2 129 aa3.91□□□□□ -1.78
LRRC28-207ENST00000558500 LYZL1Q6UWQ5 148 aa3.91□□□□□ -1.78
LRRC28-207ENST00000558500 MRPL52Q86TS9 123 aaKnown RBP3.91□□□□□ -1.78
LRRC28-207ENST00000558500 MRPL35Q9NZE8 188 aaKnown RBP3.91□□□□□ -1.78
LRRC28-207ENST00000558500 I3L3M4 83 aa3.9□□□□□ -1.79
LRRC28-207ENST00000558500 TLX1NBP0CAT3 122 aa3.9□□□□□ -1.79
LRRC28-207ENST00000558500 DEFA1P59665 94 aa3.9□□□□□ -1.79
LRRC28-207ENST00000558500 SNRPEP62304 92 aaKnown RBP3.9□□□□□ -1.79
LRRC28-207ENST00000558500 UBE2V1Q13404 147 aa3.9□□□□□ -1.79
LRRC28-207ENST00000558500 C10orf25Q5T742 122 aa3.9□□□□□ -1.79
LRRC28-207ENST00000558500 LINC00173Q6ZV60 143 aa3.9□□□□□ -1.79
LRRC28-207ENST00000558500 TMUB2Q71RG4 321 aa3.9□□□□□ -1.79
LRRC28-207ENST00000558500 C5orf38Q86SI9 138 aa3.9□□□□□ -1.79
LRRC28-207ENST00000558500 OR10D4PQ8NGN7 298 aa3.9□□□□□ -1.79
LRRC28-207ENST00000558500 MPLKIPQ8TAP9 179 aa3.9□□□□□ -1.79
LRRC28-207ENST00000558500 MRAP2Q96G30 205 aa3.9□□□□□ -1.79
LRRC28-207ENST00000558500 KRTAP4-1Q9BYQ7 146 aa3.9□□□□□ -1.79
LRRC28-207ENST00000558500 BORCS7-ASMTA0A0B4J1R7 106 aa3.89□□□□□ -1.79
LRRC28-207ENST00000558500 XKRY2A2RUG3 117 aa3.89□□□□□ -1.79
LRRC28-207ENST00000558500 TSHBP01222 138 aa3.89□□□□□ -1.79
LRRC28-207ENST00000558500 PMCHP20382 165 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms