RNA–Protein interactions for RNA: ENST00000558253.5

SPG11-209, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 879 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-209ENST00000558253 WFDC2Q14508 124 aa5.99□□□□□ -1.45
SPG11-209ENST00000558253 ETDBQ3ZM63 59 aa5.99□□□□□ -1.45
SPG11-209ENST00000558253 VSIG2Q96IQ7 327 aa5.99□□□□□ -1.45
SPG11-209ENST00000558253 PPDPFQ9H3Y8 114 aa5.99□□□□□ -1.45
SPG11-209ENST00000558253 PRO1854Q9UHT4 67 aa5.99□□□□□ -1.45
SPG11-209ENST00000558253 PRO0461Q9UI25 63 aa5.99□□□□□ -1.45
SPG11-209ENST00000558253 FBN2P35556 2912 aa5.98□□□□□ -1.45
SPG11-209ENST00000558253 IGHV3-30-3P0DP02 117 aa5.98□□□□□ -1.45
SPG11-209ENST00000558253 EMP1P54849 157 aa5.98□□□□□ -1.45
SPG11-209ENST00000558253 CIRBPQ14011 172 aaKnown RBP5.98□□□□□ -1.45
SPG11-209ENST00000558253 Q6ZSN1 163 aa5.98□□□□□ -1.45
SPG11-209ENST00000558253 Q6ZUT4 128 aa5.98□□□□□ -1.45
SPG11-209ENST00000558253 C10orf126Q8N4M7 172 aa5.98□□□□□ -1.45
SPG11-209ENST00000558253 OPRPNQ99935 248 aaPredicted RBP5.98□□□□□ -1.45
SPG11-209ENST00000558253 ANAPC13Q9BS18 74 aa5.98□□□□□ -1.45
SPG11-209ENST00000558253 NAV2Q8IVL1 2488 aa5.98□□□□□ -1.45
SPG11-209ENST00000558253 SMIM9A6NGZ8 99 aa5.97□□□□□ -1.45
SPG11-209ENST00000558253 TSPEAR-AS2P59090 65 aa5.97□□□□□ -1.45
SPG11-209ENST00000558253 UBE2D3P61077 147 aa5.97□□□□□ -1.45
SPG11-209ENST00000558253 UBE2D2P62837 147 aa5.97□□□□□ -1.45
SPG11-209ENST00000558253 MRPL23Q16540 153 aaKnown RBP5.97□□□□□ -1.45
SPG11-209ENST00000558253 TEN1Q86WV5 123 aa5.97□□□□□ -1.45
SPG11-209ENST00000558253 FAM104AQ969W3 186 aa5.97□□□□□ -1.45
SPG11-209ENST00000558253 NAA38Q9BRA0 125 aaKnown RBP5.97□□□□□ -1.45
SPG11-209ENST00000558253 UTP20O75691 2785 aaKnown RBP5.96□□□□□ -1.45
SPG11-209ENST00000558253 CFC1BP0CG36 223 aa5.96□□□□□ -1.46
SPG11-209ENST00000558253 CFC1P0CG37 223 aa5.96□□□□□ -1.46
SPG11-209ENST00000558253 SBSPONQ8IVN8 264 aa5.96□□□□□ -1.46
SPG11-209ENST00000558253 TMEM101Q96IK0 257 aa5.96□□□□□ -1.46
SPG11-209ENST00000558253 NDUFA12Q9UI09 145 aa5.96□□□□□ -1.46
SPG11-209ENST00000558253 CELSR1Q9NYQ6 3014 aa5.96□□□□□ -1.46
SPG11-209ENST00000558253 USP9YO00507 2555 aaPredicted RBP5.96□□□□□ -1.46
SPG11-209ENST00000558253 CELSR2Q9HCU4 2923 aa5.95□□□□□ -1.46
SPG11-209ENST00000558253 FAM208BQ5VWN6 2430 aa5.95□□□□□ -1.46
SPG11-209ENST00000558253 TRGV2A0A075B6R0 118 aa5.95□□□□□ -1.46
SPG11-209ENST00000558253 IGHV3OR16-12A0A075B7B8 117 aa5.95□□□□□ -1.46
SPG11-209ENST00000558253 NDUFA1O15239 70 aa5.95□□□□□ -1.46
SPG11-209ENST00000558253 GIG44P09565 113 aaPredicted RBP5.95□□□□□ -1.46
SPG11-209ENST00000558253 CSNK1G2-AS1Q8NCQ2 148 aa5.95□□□□□ -1.46
SPG11-209ENST00000558253 KIR2DL5BQ8NHK3 375 aa5.95□□□□□ -1.46
SPG11-209ENST00000558253 TMEM243Q9BU79 118 aa5.95□□□□□ -1.46
SPG11-209ENST00000558253 CDIP1Q9H305 208 aa5.95□□□□□ -1.46
SPG11-209ENST00000558253 CREBBPQ92793 2442 aa5.94□□□□□ -1.46
SPG11-209ENST00000558253 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.94□□□□□ -1.46
SPG11-209ENST00000558253 IGLV5-39A0A0G2JS06 123 aa5.94□□□□□ -1.46
SPG11-209ENST00000558253 IGKV2-29A2NJV5 120 aaPredicted RBP5.94□□□□□ -1.46
SPG11-209ENST00000558253 GAGE12JA6NER3 117 aa5.94□□□□□ -1.46
SPG11-209ENST00000558253 UBE2L6O14933 153 aa5.94□□□□□ -1.46
SPG11-209ENST00000558253 GAGE7O76087 117 aa5.94□□□□□ -1.46
SPG11-209ENST00000558253 PRM2P04554 102 aa5.94□□□□□ -1.46
SPG11-209ENST00000558253 GAGE12FP0CL80 117 aa5.94□□□□□ -1.46
SPG11-209ENST00000558253 GAGE12GP0CL81 117 aa5.94□□□□□ -1.46
SPG11-209ENST00000558253 GAGE12IP0CL82 117 aa5.94□□□□□ -1.46
SPG11-209ENST00000558253 HERV-K104P63124 156 aa5.94□□□□□ -1.46
SPG11-209ENST00000558253 GAGE4Q13068 117 aa5.94□□□□□ -1.46
SPG11-209ENST00000558253 MIAQ16674 131 aa5.94□□□□□ -1.46
SPG11-209ENST00000558253 SFTA2Q6UW10 78 aa5.94□□□□□ -1.46
SPG11-209ENST00000558253 Q6ZTI0 123 aa5.94□□□□□ -1.46
SPG11-209ENST00000558253 SH2D6Q7Z4S9 175 aa5.94□□□□□ -1.46
SPG11-209ENST00000558253 MUSTN1Q8IVN3 82 aa5.94□□□□□ -1.46
SPG11-209ENST00000558253 C11orf44Q8N8P7 122 aa5.94□□□□□ -1.46
SPG11-209ENST00000558253 LINC01600Q96MT4 127 aa5.94□□□□□ -1.46
SPG11-209ENST00000558253 TMEM126AQ9H061 195 aa5.94□□□□□ -1.46
SPG11-209ENST00000558253 NOP10Q9NPE3 64 aaKnown RBP5.94□□□□□ -1.46
SPG11-209ENST00000558253 TRGV4A0A0C4DH28 118 aa5.93□□□□□ -1.46
SPG11-209ENST00000558253 LOC107984156A0A0G2JMH3 177 aa5.93□□□□□ -1.46
SPG11-209ENST00000558253 TRBV30A0A0K0K1B3 111 aa5.93□□□□□ -1.46
SPG11-209ENST00000558253 PLAC8L1A1L4L8 177 aa5.93□□□□□ -1.46
SPG11-209ENST00000558253 A4D1N5 150 aa5.93□□□□□ -1.46
SPG11-209ENST00000558253 SNCGO76070 127 aa5.93□□□□□ -1.46
SPG11-209ENST00000558253 IGHV3-33P01772 117 aa5.93□□□□□ -1.46
SPG11-209ENST00000558253 COX6CP09669 75 aa5.93□□□□□ -1.46
SPG11-209ENST00000558253 SCGB1C2P0DMR2 95 aa5.93□□□□□ -1.46
SPG11-209ENST00000558253 GAGE2BQ13066 116 aa5.93□□□□□ -1.46
SPG11-209ENST00000558253 GAGE2EQ4V326 116 aa5.93□□□□□ -1.46
SPG11-209ENST00000558253 C9orf66Q5T8R8 295 aa5.93□□□□□ -1.46
SPG11-209ENST00000558253 ARL17AQ8IVW1 177 aa5.93□□□□□ -1.46
SPG11-209ENST00000558253 LINC00482Q8N8I6 264 aa5.93□□□□□ -1.46
SPG11-209ENST00000558253 DEFB104AQ8WTQ1 72 aa5.93□□□□□ -1.46
SPG11-209ENST00000558253 CDC42SE2Q9NRR3 84 aa5.93□□□□□ -1.46
SPG11-209ENST00000558253 GAGE2DQ9UEU5 116 aa5.93□□□□□ -1.46
SPG11-209ENST00000558253 DOPEY2Q9Y3R5 2298 aa5.93□□□□□ -1.46
SPG11-209ENST00000558253 LRRK2Q5S007 2527 aa5.93□□□□□ -1.46
SPG11-209ENST00000558253 CSMD1Q96PZ7 3565 aa5.92□□□□□ -1.46
SPG11-209ENST00000558253 IGHV3-38A0A0C4DH36 116 aa5.92□□□□□ -1.46
SPG11-209ENST00000558253 PSMB2P49721 201 aa5.92□□□□□ -1.46
SPG11-209ENST00000558253 TTC32Q5I0X7 151 aa5.92□□□□□ -1.46
SPG11-209ENST00000558253 LINC00242Q5T6M2 205 aa5.92□□□□□ -1.46
SPG11-209ENST00000558253 CEMP1Q6PRD7 247 aaPredicted RBP5.92□□□□□ -1.46
SPG11-209ENST00000558253 LINC00612Q8N6U2 182 aa5.92□□□□□ -1.46
SPG11-209ENST00000558253 LITAFQ99732 161 aa5.92□□□□□ -1.46
SPG11-209ENST00000558253 CITED1Q99966 193 aa5.92□□□□□ -1.46
SPG11-209ENST00000558253 CDKN2A-AS1Q9UH64 79 aa5.92□□□□□ -1.46
SPG11-209ENST00000558253 PTPN13Q12923 2485 aa5.92□□□□□ -1.46
SPG11-209ENST00000558253 CRYBG3Q68DQ2 2970 aa5.91□□□□□ -1.46
SPG11-209ENST00000558253 PRSS2P07478 247 aa5.91□□□□□ -1.46
SPG11-209ENST00000558253 RPL35AP18077 110 aaKnown RBP5.91□□□□□ -1.46
SPG11-209ENST00000558253 ATXN8Q156A1 80 aa5.91□□□□□ -1.46
SPG11-209ENST00000558253 Q9UF83 564 aa5.91□□□□□ -1.46
SPG11-209ENST00000558253 AGRNO00468 2067 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms