RNA–Protein interactions for RNA: ENST00000557624.1

RIPK3-206, Transcript of receptor interacting serine/threonine kinase 3, humanhuman

TSL 1 (best)

Gene RIPK3, Length 1,629 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK3-206ENST00000557624 CSMD3Q7Z407 3707 aa9.83□□□□□ -0.84
RIPK3-206ENST00000557624 TRBV7-3A0A075B6L6 115 aa9.83□□□□□ -0.84
RIPK3-206ENST00000557624 APLNQ9ULZ1 77 aa9.83□□□□□ -0.84
RIPK3-206ENST00000557624 TENM2Q9NT68 2774 aa9.83□□□□□ -0.84
RIPK3-206ENST00000557624 ERASQ7Z444 233 aa9.82□□□□□ -0.84
RIPK3-206ENST00000557624 ORMDL3Q8N138 153 aa9.82□□□□□ -0.84
RIPK3-206ENST00000557624 URB1-AS1Q96HZ7 61 aa9.82□□□□□ -0.84
RIPK3-206ENST00000557624 F8W1H4 67 aa9.82□□□□□ -0.84
RIPK3-206ENST00000557624 H3BUT2 72 aa9.82□□□□□ -0.84
RIPK3-206ENST00000557624 LINC00694P0DN24 101 aa9.82□□□□□ -0.84
RIPK3-206ENST00000557624 BOD1L2Q8IYS8 172 aa9.82□□□□□ -0.84
RIPK3-206ENST00000557624 DNAJC30Q96LL9 226 aa9.82□□□□□ -0.84
RIPK3-206ENST00000557624 STARD9Q9P2P6 4700 aa9.81□□□□□ -0.84
RIPK3-206ENST00000557624 IGHV3-38A0A0C4DH36 116 aa9.81□□□□□ -0.84
RIPK3-206ENST00000557624 GAGE12HA6NDE8 117 aa9.81□□□□□ -0.84
RIPK3-206ENST00000557624 TCTAP57738 103 aa9.81□□□□□ -0.84
RIPK3-206ENST00000557624 CKS1BP61024 79 aa9.81□□□□□ -0.84
RIPK3-206ENST00000557624 UBE2D3P61077 147 aa9.81□□□□□ -0.84
RIPK3-206ENST00000557624 UBE2D2P62837 147 aa9.81□□□□□ -0.84
RIPK3-206ENST00000557624 NRACQ8N912 160 aa9.81□□□□□ -0.84
RIPK3-206ENST00000557624 ATP6V0E2Q8NHE4 81 aa9.81□□□□□ -0.84
RIPK3-206ENST00000557624 PRELID3AQ96N28 172 aa9.81□□□□□ -0.84
RIPK3-206ENST00000557624 PPP1R17O96001 155 aa9.8□□□□□ -0.84
RIPK3-206ENST00000557624 NPYP01303 97 aa9.8□□□□□ -0.84
RIPK3-206ENST00000557624 FGF6P10767 208 aa9.8□□□□□ -0.84
RIPK3-206ENST00000557624 SH2D6Q7Z4S9 175 aa9.8□□□□□ -0.84
RIPK3-206ENST00000557624 SDHAF1A6NFY7 115 aa9.79□□□□□ -0.84
RIPK3-206ENST00000557624 TNFRSF6BO95407 300 aa9.79□□□□□ -0.84
RIPK3-206ENST00000557624 LGALS9CQ6DKI2 356 aa9.79□□□□□ -0.84
RIPK3-206ENST00000557624 DEFB104AQ8WTQ1 72 aa9.79□□□□□ -0.84
RIPK3-206ENST00000557624 SUMO2P61956 95 aaKnown RBP9.78□□□□□ -0.84
RIPK3-206ENST00000557624 HIGD1BQ9P298 99 aa9.78□□□□□ -0.84
RIPK3-206ENST00000557624 TRBV6-5A0A0K0K1A5 114 aa9.78□□□□□ -0.84
RIPK3-206ENST00000557624 ESRGQ1W209 222 aa9.78□□□□□ -0.84
RIPK3-206ENST00000557624 DAZ4Q86SG3 579 aaKnown RBP9.78□□□□□ -0.84
RIPK3-206ENST00000557624 DAZ3Q9NR90 486 aaKnown RBP9.78□□□□□ -0.84
RIPK3-206ENST00000557624 SMIM13P0DJ93 91 aa9.77□□□□□ -0.85
RIPK3-206ENST00000557624 SMAGPQ0VAQ4 97 aa9.77□□□□□ -0.85
RIPK3-206ENST00000557624 LYPD5Q6UWN5 251 aa9.77□□□□□ -0.85
RIPK3-206ENST00000557624 GTSF1LQ9H1H1 148 aa9.77□□□□□ -0.85
RIPK3-206ENST00000557624 CCL18P55774 89 aa9.76□□□□□ -0.85
RIPK3-206ENST00000557624 RPL24P83731 157 aaKnown RBP9.76□□□□□ -0.85
RIPK3-206ENST00000557624 C20orf78Q9BR46 151 aa9.76□□□□□ -0.85
RIPK3-206ENST00000557624 VCX2Q9H322 139 aa9.76□□□□□ -0.85
RIPK3-206ENST00000557624 AP5S1Q9NUS5 200 aa9.76□□□□□ -0.85
RIPK3-206ENST00000557624 LOC389332A0A1B0GUA5 103 aa9.75□□□□□ -0.85
RIPK3-206ENST00000557624 UBE2DNLQ8IWF7 75 aa9.75□□□□□ -0.85
RIPK3-206ENST00000557624 POLR2KP53803 58 aaKnown RBP9.74□□□□□ -0.85
RIPK3-206ENST00000557624 SMIM2Q9BVW6 85 aa9.74□□□□□ -0.85
RIPK3-206ENST00000557624 MAP1LC3AQ9H492 121 aa9.74□□□□□ -0.85
RIPK3-206ENST00000557624 SPANXB1Q9NS25 103 aaPredicted RBP9.74□□□□□ -0.85
RIPK3-206ENST00000557624 SPANXA1Q9NS26 97 aa9.74□□□□□ -0.85
RIPK3-206ENST00000557624 LINC00588Q9Y4M8 146 aa9.74□□□□□ -0.85
RIPK3-206ENST00000557624 DYNC2H1Q8NCM8 4307 aaKnown RBP9.74□□□□□ -0.85
RIPK3-206ENST00000557624 TRBV27A0A0K0K1C4 114 aa9.74□□□□□ -0.85
RIPK3-206ENST00000557624 I3L3M4 83 aa9.74□□□□□ -0.85
RIPK3-206ENST00000557624 VCYO14598 125 aa9.74□□□□□ -0.85
RIPK3-206ENST00000557624 TSPAN13O95857 204 aa9.73□□□□□ -0.85
RIPK3-206ENST00000557624 GEMIN7Q9H840 131 aaKnown RBP9.73□□□□□ -0.85
RIPK3-206ENST00000557624 TRBV6-8A0A0A6YYG3 113 aa9.72□□□□□ -0.85
RIPK3-206ENST00000557624 TIRAPP58753 221 aa9.72□□□□□ -0.85
RIPK3-206ENST00000557624 TAL2Q16559 108 aa9.72□□□□□ -0.85
RIPK3-206ENST00000557624 LELP1Q5T871 98 aa9.72□□□□□ -0.85
RIPK3-206ENST00000557624 NTM-AS1Q6ZSK4 140 aa9.72□□□□□ -0.85
RIPK3-206ENST00000557624 LINC00173Q6ZV60 143 aa9.72□□□□□ -0.85
RIPK3-206ENST00000557624 KIR2DL4Q99706 377 aa9.72□□□□□ -0.85
RIPK3-206ENST00000557624 PLECQ15149 4684 aaKnown RBP9.71□□□□□ -0.85
RIPK3-206ENST00000557624 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.71□□□□□ -0.85
RIPK3-206ENST00000557624 TSHBP01222 138 aa9.71□□□□□ -0.85
RIPK3-206ENST00000557624 FCER1GP30273 86 aa9.71□□□□□ -0.85
RIPK3-206ENST00000557624 RPL32P62910 135 aaKnown RBP9.71□□□□□ -0.85
RIPK3-206ENST00000557624 TP73-AS1Q9UF72 201 aa9.71□□□□□ -0.85
RIPK3-206ENST00000557624 CYSLTR1Q9Y271 337 aa9.71□□□□□ -0.85
RIPK3-206ENST00000557624 TRBV25-1A0A075B6N4 114 aa9.71□□□□□ -0.86
RIPK3-206ENST00000557624 LY6G6CO95867 125 aa9.7□□□□□ -0.86
RIPK3-206ENST00000557624 IFI27P40305 119 aaPredicted RBP9.7□□□□□ -0.86
RIPK3-206ENST00000557624 WFDC10BQ8IUB3 73 aa9.7□□□□□ -0.86
RIPK3-206ENST00000557624 PRSS3P2Q8NHM4 247 aa9.7□□□□□ -0.86
RIPK3-206ENST00000557624 CHCHD5Q9BSY4 110 aa9.7□□□□□ -0.86
RIPK3-206ENST00000557624 NXT2Q9NPJ8 142 aaKnown RBP9.7□□□□□ -0.86
RIPK3-206ENST00000557624 IGLV2-18A0A075B6J9 118 aa9.69□□□□□ -0.86
RIPK3-206ENST00000557624 E9PLD3 99 aa9.69□□□□□ -0.86
RIPK3-206ENST00000557624 Q8N8P6 123 aa9.69□□□□□ -0.86
RIPK3-206ENST00000557624 LINC00476Q8WZB0 136 aa9.69□□□□□ -0.86
RIPK3-206ENST00000557624 TMEM243Q9BU79 118 aa9.69□□□□□ -0.86
RIPK3-206ENST00000557624 TM2D2Q9BX73 214 aa9.69□□□□□ -0.86
RIPK3-206ENST00000557624 H0Y8G0 127 aa9.67□□□□□ -0.86
RIPK3-206ENST00000557624 UPK3BQ9BT76 320 aa9.67□□□□□ -0.86
RIPK3-206ENST00000557624 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.67□□□□□ -0.86
RIPK3-206ENST00000557624 IGKV2-29A2NJV5 120 aaPredicted RBP9.67□□□□□ -0.86
RIPK3-206ENST00000557624 GAGE6Q13070 117 aa9.67□□□□□ -0.86
RIPK3-206ENST00000557624 CHCHD7Q9BUK0 85 aa9.67□□□□□ -0.86
RIPK3-206ENST00000557624 TMEM262E9PQX1 116 aa9.66□□□□□ -0.86
RIPK3-206ENST00000557624 UBE2L6O14933 153 aa9.66□□□□□ -0.86
RIPK3-206ENST00000557624 Q8N3U1 123 aa9.66□□□□□ -0.86
RIPK3-206ENST00000557624 Q9H8V8 135 aa9.66□□□□□ -0.86
RIPK3-206ENST00000557624 LYSTQ99698 3801 aa9.66□□□□□ -0.86
RIPK3-206ENST00000557624 HBDP02042 147 aa9.65□□□□□ -0.86
RIPK3-206ENST00000557624 RAB37Q96AX2 223 aa9.65□□□□□ -0.86
RIPK3-206ENST00000557624 ERG28Q9UKR5 140 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms