RNA–Protein interactions for RNA: ENST00000557592.5

APEX1-220, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 5

Gene APEX1, Length 640 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-220ENST00000557592 UBE2D4Q9Y2X8 147 aa7.59□□□□□ -1.19
APEX1-220ENST00000557592 TRGC2P03986 189 aa7.58□□□□□ -1.2
APEX1-220ENST00000557592 MIAQ16674 131 aa7.58□□□□□ -1.2
APEX1-220ENST00000557592 ZNF664Q8N3J9 261 aa7.58□□□□□ -1.2
APEX1-220ENST00000557592 C18orf32Q8TCD1 76 aa7.58□□□□□ -1.2
APEX1-220ENST00000557592 TIMM21Q9BVV7 248 aa7.58□□□□□ -1.2
APEX1-220ENST00000557592 FAT2Q9NYQ8 4349 aa7.57□□□□□ -1.2
APEX1-220ENST00000557592 IGLV10-54A0A075B6I4 117 aa7.57□□□□□ -1.2
APEX1-220ENST00000557592 C2orf66Q6UXQ4 117 aa7.57□□□□□ -1.2
APEX1-220ENST00000557592 CDC42SE2Q9NRR3 84 aa7.57□□□□□ -1.2
APEX1-220ENST00000557592 SPANXA1Q9NS26 97 aa7.57□□□□□ -1.2
APEX1-220ENST00000557592 CYSLTR1Q9Y271 337 aa7.57□□□□□ -1.2
APEX1-220ENST00000557592 CSDC2Q9Y534 153 aaKnown RBP7.57□□□□□ -1.2
APEX1-220ENST00000557592 COX11Q9Y6N1 276 aa7.57□□□□□ -1.2
APEX1-220ENST00000557592 LINC01546A6NGU7 62 aa7.56□□□□□ -1.2
APEX1-220ENST00000557592 RNASE13Q5GAN3 156 aaKnown RBP7.56□□□□□ -1.2
APEX1-220ENST00000557592 Q6ZUT4 128 aa7.56□□□□□ -1.2
APEX1-220ENST00000557592 TRAV8-4A0A0B4J246 113 aa7.55□□□□□ -1.2
APEX1-220ENST00000557592 G0S2P27469 103 aa7.55□□□□□ -1.2
APEX1-220ENST00000557592 OPRPNQ99935 248 aaPredicted RBP7.55□□□□□ -1.2
APEX1-220ENST00000557592 AP5S1Q9NUS5 200 aa7.55□□□□□ -1.2
APEX1-220ENST00000557592 LINC00614P0C842 121 aa7.54□□□□□ -1.2
APEX1-220ENST00000557592 RAB5BP61020 215 aa7.54□□□□□ -1.2
APEX1-220ENST00000557592 TOMM6Q96B49 74 aa7.54□□□□□ -1.2
APEX1-220ENST00000557592 URB1-AS1Q96HZ7 61 aa7.54□□□□□ -1.2
APEX1-220ENST00000557592 PYGO1Q9Y3Y4 419 aa7.54□□□□□ -1.2
APEX1-220ENST00000557592 A0A087WTM6 91 aa7.53□□□□□ -1.2
APEX1-220ENST00000557592 LINC00959A0A1B0GUT2 108 aa7.53□□□□□ -1.2
APEX1-220ENST00000557592 EREGO14944 169 aa7.53□□□□□ -1.2
APEX1-220ENST00000557592 LECT2O14960 151 aa7.53□□□□□ -1.2
APEX1-220ENST00000557592 MRPS36P82909 103 aaKnown RBP7.53□□□□□ -1.2
APEX1-220ENST00000557592 MAPKAPK5-AS1Q8N8E1 139 aa7.53□□□□□ -1.2
APEX1-220ENST00000557592 BAALCQ8WXS3 180 aa7.53□□□□□ -1.2
APEX1-220ENST00000557592 PKD1P98161 4303 aa7.52□□□□□ -1.21
APEX1-220ENST00000557592 IGLV4-3A0A075B6K6 122 aa7.52□□□□□ -1.21
APEX1-220ENST00000557592 TRAV13-1A0A0B4J241 112 aa7.52□□□□□ -1.21
APEX1-220ENST00000557592 A0A1B0GVY2 172 aa7.52□□□□□ -1.21
APEX1-220ENST00000557592 LRCOL1A6NCL2 159 aa7.52□□□□□ -1.21
APEX1-220ENST00000557592 GAGE12HA6NDE8 117 aa7.52□□□□□ -1.21
APEX1-220ENST00000557592 SS18Q15532 418 aa7.52□□□□□ -1.21
APEX1-220ENST00000557592 KRTAP26-1Q6PEX3 210 aa7.52□□□□□ -1.21
APEX1-220ENST00000557592 BAGE3Q86Y29 109 aa7.52□□□□□ -1.21
APEX1-220ENST00000557592 CHCHD10Q8WYQ3 142 aaPredicted RBP7.52□□□□□ -1.21
APEX1-220ENST00000557592 FAM104AQ969W3 186 aa7.52□□□□□ -1.21
APEX1-220ENST00000557592 TMEM141Q96I45 108 aa7.52□□□□□ -1.21
APEX1-220ENST00000557592 SCGB3A1Q96QR1 104 aa7.52□□□□□ -1.21
APEX1-220ENST00000557592 EPPK1P58107 5090 aaKnown RBP7.51□□□□□ -1.21
APEX1-220ENST00000557592 IGIPA6NJ69 53 aa7.51□□□□□ -1.21
APEX1-220ENST00000557592 IFITM10A6NMD0 228 aa7.51□□□□□ -1.21
APEX1-220ENST00000557592 CCL25O15444 150 aa7.51□□□□□ -1.21
APEX1-220ENST00000557592 XCL1P47992 114 aa7.51□□□□□ -1.21
APEX1-220ENST00000557592 WFDC2Q14508 124 aa7.51□□□□□ -1.21
APEX1-220ENST00000557592 PMCHL1Q16048 86 aa7.51□□□□□ -1.21
APEX1-220ENST00000557592 Q6ZN92 141 aa7.51□□□□□ -1.21
APEX1-220ENST00000557592 HECTD4Q9Y4D8 3996 aa7.51□□□□□ -1.21
APEX1-220ENST00000557592 DNAH11Q96DT5 4516 aa7.5□□□□□ -1.21
APEX1-220ENST00000557592 LINC01549A6NIU2 74 aa7.5□□□□□ -1.21
APEX1-220ENST00000557592 C1orf196B1AJZ1 125 aa7.5□□□□□ -1.21
APEX1-220ENST00000557592 NPSP0C0P6 89 aa7.5□□□□□ -1.21
APEX1-220ENST00000557592 TEX43Q6ZNM6 134 aa7.5□□□□□ -1.21
APEX1-220ENST00000557592 ERASQ7Z444 233 aa7.5□□□□□ -1.21
APEX1-220ENST00000557592 CHCHD1Q96BP2 118 aaKnown RBP7.5□□□□□ -1.21
APEX1-220ENST00000557592 TIMM17AQ99595 171 aa7.5□□□□□ -1.21
APEX1-220ENST00000557592 VCX2Q9H322 139 aa7.5□□□□□ -1.21
APEX1-220ENST00000557592 A0A096LNJ9 63 aa7.49□□□□□ -1.21
APEX1-220ENST00000557592 USP17L23D6RBM5 183 aa7.49□□□□□ -1.21
APEX1-220ENST00000557592 HBDP02042 147 aa7.49□□□□□ -1.21
APEX1-220ENST00000557592 PAPPA-AS1Q5QFB9 102 aa7.49□□□□□ -1.21
APEX1-220ENST00000557592 ZC2HC1BQ5TFG8 222 aa7.49□□□□□ -1.21
APEX1-220ENST00000557592 SPATA12Q7Z6I5 190 aa7.49□□□□□ -1.21
APEX1-220ENST00000557592 Q8N814 137 aa7.49□□□□□ -1.21
APEX1-220ENST00000557592 C2orf88Q9BSF0 95 aa7.49□□□□□ -1.21
APEX1-220ENST00000557592 KRTAP10-2P60368 255 aa7.48□□□□□ -1.21
APEX1-220ENST00000557592 FOXI1Q12951 378 aa7.48□□□□□ -1.21
APEX1-220ENST00000557592 LINC00173Q6ZV60 143 aa7.48□□□□□ -1.21
APEX1-220ENST00000557592 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.47□□□□□ -1.21
APEX1-220ENST00000557592 HIST1H2BKO60814 126 aa7.47□□□□□ -1.21
APEX1-220ENST00000557592 HSBP1O75506 76 aa7.47□□□□□ -1.21
APEX1-220ENST00000557592 SERF1AO75920 110 aa7.47□□□□□ -1.21
APEX1-220ENST00000557592 HIST1H2BJP06899 126 aa7.47□□□□□ -1.21
APEX1-220ENST00000557592 HIST1H2BOP23527 126 aa7.47□□□□□ -1.21
APEX1-220ENST00000557592 HIST1H2BBP33778 126 aa7.47□□□□□ -1.21
APEX1-220ENST00000557592 FUSP35637 526 aaKnown RBP eCLIP7.47□□□□□ -1.21
APEX1-220ENST00000557592 HIST1H2BDP58876 126 aa7.47□□□□□ -1.21
APEX1-220ENST00000557592 HIST1H2BCP62807 126 aa7.47□□□□□ -1.21
APEX1-220ENST00000557592 HIST2H2BEQ16778 126 aa7.47□□□□□ -1.21
APEX1-220ENST00000557592 C14orf177Q52M58 125 aa7.47□□□□□ -1.21
APEX1-220ENST00000557592 PDZD11Q5EBL8 140 aa7.47□□□□□ -1.21
APEX1-220ENST00000557592 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.47□□□□□ -1.21
APEX1-220ENST00000557592 CD164L2Q6UWJ8 174 aa7.47□□□□□ -1.21
APEX1-220ENST00000557592 HIST1H2BHQ93079 126 aa7.47□□□□□ -1.21
APEX1-220ENST00000557592 AMELXQ99217 191 aa7.47□□□□□ -1.21
APEX1-220ENST00000557592 HIST1H2BNQ99877 126 aa7.47□□□□□ -1.21
APEX1-220ENST00000557592 HIST1H2BMQ99879 126 aa7.47□□□□□ -1.21
APEX1-220ENST00000557592 PKHD1P08F94 4074 aa7.47□□□□□ -1.21
APEX1-220ENST00000557592 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.46□□□□□ -1.22
APEX1-220ENST00000557592 LINC00310P59036 64 aa7.46□□□□□ -1.22
APEX1-220ENST00000557592 FAM19A2Q8N3H0 131 aa7.46□□□□□ -1.22
APEX1-220ENST00000557592 COX7A2LO14548 114 aa7.45□□□□□ -1.22
APEX1-220ENST00000557592 UBE2D1P51668 147 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms