RNA–Protein interactions for RNA: ENST00000557548.1

TRAV28-201, Transcript of T cell receptor alpha variable 28 (pseudogene), humanhuman

BASIC

Gene TRAV28, Length 323 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV28-201ENST00000557548 ZNF791Q3KP31 576 aaPredicted RBP1.56□□□□□ -2.16
TRAV28-201ENST00000557548 TDRG1Q3Y452 100 aa1.56□□□□□ -2.16
TRAV28-201ENST00000557548 C9orf116Q5BN46 136 aaPredicted RBP1.56□□□□□ -2.16
TRAV28-201ENST00000557548 BRD3OSQ6XYD6 125 aa1.56□□□□□ -2.16
TRAV28-201ENST00000557548 ZCCHC23Q6ZST2 131 aa1.56□□□□□ -2.16
TRAV28-201ENST00000557548 OR10AG1Q8NH19 301 aa1.56□□□□□ -2.16
TRAV28-201ENST00000557548 FAM213BQ8TBF2 198 aa1.56□□□□□ -2.16
TRAV28-201ENST00000557548 S100ZQ8WXG8 99 aa1.56□□□□□ -2.16
TRAV28-201ENST00000557548 TRGV9Q99603 122 aa1.56□□□□□ -2.16
TRAV28-201ENST00000557548 C20orf78Q9BR46 151 aa1.56□□□□□ -2.16
TRAV28-201ENST00000557548 Q9BRP9 147 aa1.56□□□□□ -2.16
TRAV28-201ENST00000557548 ST20Q9HBF5 79 aa1.56□□□□□ -2.16
TRAV28-201ENST00000557548 BAZ2BQ9UIF8 2168 aaKnown RBP1.56□□□□□ -2.16
TRAV28-201ENST00000557548 MYO7AQ13402 2215 aa1.56□□□□□ -2.16
TRAV28-201ENST00000557548 PATJQ8NI35 1801 aa1.56□□□□□ -2.16
TRAV28-201ENST00000557548 C5orf42Q9H799 3197 aa1.55□□□□□ -2.16
TRAV28-201ENST00000557548 PRRC2BQ5JSZ5 2229 aaKnown RBP1.55□□□□□ -2.16
TRAV28-201ENST00000557548 TRAV13-2A0A0B4J235 113 aa1.55□□□□□ -2.16
TRAV28-201ENST00000557548 H3BRM9 83 aa1.55□□□□□ -2.16
TRAV28-201ENST00000557548 IGKV4-1P06312 121 aa1.55□□□□□ -2.16
TRAV28-201ENST00000557548 DEFB113Q30KQ7 82 aa1.55□□□□□ -2.16
TRAV28-201ENST00000557548 ZNF833PQ6ZTB9 187 aa1.55□□□□□ -2.16
TRAV28-201ENST00000557548 SERP2Q8N6R1 65 aa1.55□□□□□ -2.16
TRAV28-201ENST00000557548 SPTSSBQ8NFR3 76 aa1.55□□□□□ -2.16
TRAV28-201ENST00000557548 CYP4F30PQ9H0H9 118 aa1.55□□□□□ -2.16
TRAV28-201ENST00000557548 PRO3102Q9H379 93 aa1.55□□□□□ -2.16
TRAV28-201ENST00000557548 CACFD1Q9UGQ2 172 aa1.55□□□□□ -2.16
TRAV28-201ENST00000557548 LHFPL6Q9Y693 200 aa1.55□□□□□ -2.16
TRAV28-201ENST00000557548 SPCS1Q9Y6A9 102 aa1.55□□□□□ -2.16
TRAV28-201ENST00000557548 NCOR1O75376 2440 aa1.55□□□□□ -2.16
TRAV28-201ENST00000557548 USP34Q70CQ2 3546 aa1.54□□□□□ -2.16
TRAV28-201ENST00000557548 SYS1-DBNDD2H3BUS1 97 aa1.54□□□□□ -2.16
TRAV28-201ENST00000557548 PRB4P10163 310 aaPredicted RBP1.54□□□□□ -2.16
TRAV28-201ENST00000557548 MPV17LQ2QL34 196 aa1.54□□□□□ -2.16
TRAV28-201ENST00000557548 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.54□□□□□ -2.16
TRAV28-201ENST00000557548 NDUFA11Q86Y39 141 aa1.54□□□□□ -2.16
TRAV28-201ENST00000557548 CLECL1Q8IZS7 167 aa1.54□□□□□ -2.16
TRAV28-201ENST00000557548 Q8TAT8 98 aa1.54□□□□□ -2.16
TRAV28-201ENST00000557548 PRO2289Q9P1D8 64 aa1.54□□□□□ -2.16
TRAV28-201ENST00000557548 TRANK1O15050 2925 aa1.54□□□□□ -2.16
TRAV28-201ENST00000557548 CHD7Q9P2D1 2997 aa1.54□□□□□ -2.16
TRAV28-201ENST00000557548 MUC22E2RYF6 1773 aaPredicted RBP1.54□□□□□ -2.16
TRAV28-201ENST00000557548 ARHGAP32A7KAX9 2087 aa1.54□□□□□ -2.16
TRAV28-201ENST00000557548 CUL9Q8IWT3 2517 aa1.54□□□□□ -2.16
TRAV28-201ENST00000557548 CHD9Q3L8U1 2897 aa1.53□□□□□ -2.16
TRAV28-201ENST00000557548 TRBV7-1A0A0A6YYK4 115 aa1.53□□□□□ -2.16
TRAV28-201ENST00000557548 A0A0G2JQZ4 141 aa1.53□□□□□ -2.16
TRAV28-201ENST00000557548 A0A1W2PPM0 123 aa1.53□□□□□ -2.16
TRAV28-201ENST00000557548 KANTRA0A1W2PQU2 76 aa1.53□□□□□ -2.16
TRAV28-201ENST00000557548 TMEM30CPA0ZSE6 113 aa1.53□□□□□ -2.16
TRAV28-201ENST00000557548 CCL16O15467 120 aa1.53□□□□□ -2.16
TRAV28-201ENST00000557548 KRTAP10-10P60014 251 aa1.53□□□□□ -2.16
TRAV28-201ENST00000557548 ELOBQ15370 118 aa1.53□□□□□ -2.16
TRAV28-201ENST00000557548 HMGN3Q15651 99 aa1.53□□□□□ -2.16
TRAV28-201ENST00000557548 SDK2Q58EX2 2172 aa1.53□□□□□ -2.16
TRAV28-201ENST00000557548 Q5BKY6 102 aa1.53□□□□□ -2.16
TRAV28-201ENST00000557548 Q6ZTI0 123 aa1.53□□□□□ -2.16
TRAV28-201ENST00000557548 C4orf3Q8WVX3 66 aa1.53□□□□□ -2.16
TRAV28-201ENST00000557548 NXT2Q9NPJ8 142 aaKnown RBP1.53□□□□□ -2.16
TRAV28-201ENST00000557548 CDC42SE1Q9NRR8 79 aa1.53□□□□□ -2.16
TRAV28-201ENST00000557548 C22orf24Q9Y442 160 aa1.53□□□□□ -2.16
TRAV28-201ENST00000557548 TECTAO75443 2155 aa1.52□□□□□ -2.17
TRAV28-201ENST00000557548 SNRNP200O75643 2136 aaKnown RBP1.52□□□□□ -2.17
TRAV28-201ENST00000557548 TNRC6BQ9UPQ9 1833 aaKnown RBP1.52□□□□□ -2.17
TRAV28-201ENST00000557548 TRAV23DV6A0A075B6W5 121 aa1.52□□□□□ -2.17
TRAV28-201ENST00000557548 TRGV4A0A0C4DH28 118 aa1.52□□□□□ -2.17
TRAV28-201ENST00000557548 C2orf70A6NJV1 201 aa1.52□□□□□ -2.17
TRAV28-201ENST00000557548 HCG22E2RYF7 251 aa1.52□□□□□ -2.17
TRAV28-201ENST00000557548 CFDP00746 253 aaPredicted RBP1.52□□□□□ -2.17
TRAV28-201ENST00000557548 IGLC2P0DOY2 106 aa1.52□□□□□ -2.17
TRAV28-201ENST00000557548 IGLC3P0DOY3 106 aa1.52□□□□□ -2.17
TRAV28-201ENST00000557548 PDE6HQ13956 83 aa1.52□□□□□ -2.17
TRAV28-201ENST00000557548 ETDBQ3ZM63 59 aa1.52□□□□□ -2.17
TRAV28-201ENST00000557548 CYP2G1PQ6ZSU1 146 aa1.52□□□□□ -2.17
TRAV28-201ENST00000557548 TIMM21Q9BVV7 248 aa1.52□□□□□ -2.17
TRAV28-201ENST00000557548 MANBALQ9NQG1 85 aa1.52□□□□□ -2.17
TRAV28-201ENST00000557548 LINC00474Q9P2X8 69 aa1.52□□□□□ -2.17
TRAV28-201ENST00000557548 SPAG17Q6Q759 2223 aa1.52□□□□□ -2.17
TRAV28-201ENST00000557548 PCNX2A6NKB5 2137 aa1.52□□□□□ -2.17
TRAV28-201ENST00000557548 WDFY4Q6ZS81 3184 aa1.51□□□□□ -2.17
TRAV28-201ENST00000557548 TRIOO75962 3097 aa1.51□□□□□ -2.17
TRAV28-201ENST00000557548 DIDO1Q9BTC0 2240 aaKnown RBP1.51□□□□□ -2.17
TRAV28-201ENST00000557548 KIAA2026Q5HYC2 2103 aa1.51□□□□□ -2.17
TRAV28-201ENST00000557548 MYOFQ9NZM1 2061 aa1.51□□□□□ -2.17
TRAV28-201ENST00000557548 DCHS1Q96JQ0 3298 aa1.51□□□□□ -2.17
TRAV28-201ENST00000557548 TRAV12-3A0A0B4J271 114 aa1.51□□□□□ -2.17
TRAV28-201ENST00000557548 TRBV10-1A0A0K0K1A3 114 aa1.51□□□□□ -2.17
TRAV28-201ENST00000557548 CXorf51AA0A1B0GTR3 108 aa1.51□□□□□ -2.17
TRAV28-201ENST00000557548 SIX6O95475 246 aa1.51□□□□□ -2.17
TRAV28-201ENST00000557548 SMIM11AP58511 58 aa1.51□□□□□ -2.17
TRAV28-201ENST00000557548 C1orf137Q5JT78 98 aa1.51□□□□□ -2.17
TRAV28-201ENST00000557548 BVES-AS1Q5T3Y7 98 aa1.51□□□□□ -2.17
TRAV28-201ENST00000557548 KRTAP26-1Q6PEX3 210 aa1.51□□□□□ -2.17
TRAV28-201ENST00000557548 LYPD5Q6UWN5 251 aa1.51□□□□□ -2.17
TRAV28-201ENST00000557548 ZNF818PQ6ZRF7 136 aa1.51□□□□□ -2.17
TRAV28-201ENST00000557548 C9orf163Q8N9P6 203 aa1.51□□□□□ -2.17
TRAV28-201ENST00000557548 FAM167A-AS1Q96KT0 104 aa1.51□□□□□ -2.17
TRAV28-201ENST00000557548 AMELYQ99218 206 aa1.51□□□□□ -2.17
TRAV28-201ENST00000557548 ORMDL1Q9P0S3 153 aa1.51□□□□□ -2.17
TRAV28-201ENST00000557548 COL4A2P08572 1712 aa1.51□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms