RNA–Protein interactions for RNA: ENST00000557331.1

RDH11-210, Transcript of retinol dehydrogenase 11, humanhuman

TSL 4

Gene RDH11, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-210ENST00000557331 Q6ZNX1 250 aa6.25□□□□□ -1.41
RDH11-210ENST00000557331 MRAP2Q96G30 205 aa6.25□□□□□ -1.41
RDH11-210ENST00000557331 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.24□□□□□ -1.41
RDH11-210ENST00000557331 TRBV6-5A0A0K0K1A5 114 aa6.24□□□□□ -1.41
RDH11-210ENST00000557331 IGKV2-29A2NJV5 120 aaPredicted RBP6.24□□□□□ -1.41
RDH11-210ENST00000557331 COX7A2LO14548 114 aa6.24□□□□□ -1.41
RDH11-210ENST00000557331 MRPL52Q86TS9 123 aaKnown RBP6.24□□□□□ -1.41
RDH11-210ENST00000557331 A0A1B0GV50 99 aa6.23□□□□□ -1.41
RDH11-210ENST00000557331 ESDP10768 282 aa6.23□□□□□ -1.41
RDH11-210ENST00000557331 TAGLN2P37802 199 aaKnown RBP6.23□□□□□ -1.41
RDH11-210ENST00000557331 C9orf116Q5BN46 136 aaPredicted RBP6.23□□□□□ -1.41
RDH11-210ENST00000557331 NUP35Q8NFH5 326 aa6.23□□□□□ -1.41
RDH11-210ENST00000557331 CAMK2N2Q96S95 79 aa6.23□□□□□ -1.41
RDH11-210ENST00000557331 IMMP2LQ96T52 175 aa6.23□□□□□ -1.41
RDH11-210ENST00000557331 CDC42SE2Q9NRR3 84 aa6.23□□□□□ -1.41
RDH11-210ENST00000557331 GNG13Q9P2W3 67 aa6.23□□□□□ -1.41
RDH11-210ENST00000557331 A0A1W2PNN7 141 aa6.22□□□□□ -1.41
RDH11-210ENST00000557331 KANTRA0A1W2PQU2 76 aa6.22□□□□□ -1.41
RDH11-210ENST00000557331 HMSDA8MTL9 139 aa6.22□□□□□ -1.41
RDH11-210ENST00000557331 H0Y9J4 135 aa6.22□□□□□ -1.41
RDH11-210ENST00000557331 IGLV7-43P04211 117 aa6.22□□□□□ -1.41
RDH11-210ENST00000557331 MEF2BQ02080 365 aaPredicted RBP6.22□□□□□ -1.41
RDH11-210ENST00000557331 LINC00526Q96FQ7 95 aa6.22□□□□□ -1.41
RDH11-210ENST00000557331 ST20Q9HBF5 79 aa6.22□□□□□ -1.41
RDH11-210ENST00000557331 CSDC2Q9Y534 153 aaKnown RBP6.22□□□□□ -1.41
RDH11-210ENST00000557331 PPP1R17O96001 155 aa6.21□□□□□ -1.42
RDH11-210ENST00000557331 PRR26Q8N8Z3 221 aa6.21□□□□□ -1.42
RDH11-210ENST00000557331 NUDT10Q8NFP7 164 aa6.21□□□□□ -1.42
RDH11-210ENST00000557331 NUDT11Q96G61 164 aa6.21□□□□□ -1.42
RDH11-210ENST00000557331 KRTAP9-2Q9BYQ4 174 aa6.21□□□□□ -1.42
RDH11-210ENST00000557331 RPP21Q9H633 154 aaKnown RBP6.21□□□□□ -1.42
RDH11-210ENST00000557331 MED9Q9NWA0 146 aa6.21□□□□□ -1.42
RDH11-210ENST00000557331 CARHSP1Q9Y2V2 147 aaKnown RBP6.21□□□□□ -1.42
RDH11-210ENST00000557331 A0A087WZ39 114 aa6.2□□□□□ -1.42
RDH11-210ENST00000557331 C7orf77A4D0Y5 90 aa6.2□□□□□ -1.42
RDH11-210ENST00000557331 RAB19A4D1S5 217 aa6.2□□□□□ -1.42
RDH11-210ENST00000557331 G3V3Q6 166 aa6.2□□□□□ -1.42
RDH11-210ENST00000557331 UBE2D1P51668 147 aa6.2□□□□□ -1.42
RDH11-210ENST00000557331 PRR4Q16378 134 aa6.2□□□□□ -1.42
RDH11-210ENST00000557331 TMEM241Q24JQ0 296 aa6.2□□□□□ -1.42
RDH11-210ENST00000557331 OR10D4PQ8NGN7 298 aa6.2□□□□□ -1.42
RDH11-210ENST00000557331 BORCS7Q96B45 105 aa6.2□□□□□ -1.42
RDH11-210ENST00000557331 RPL39LQ96EH5 51 aaKnown RBP6.2□□□□□ -1.42
RDH11-210ENST00000557331 TRBV27A0A0K0K1C4 114 aa6.19□□□□□ -1.42
RDH11-210ENST00000557331 A8MWL6 223 aa6.19□□□□□ -1.42
RDH11-210ENST00000557331 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.19□□□□□ -1.42
RDH11-210ENST00000557331 BCL2L11O43521 198 aa6.19□□□□□ -1.42
RDH11-210ENST00000557331 BCL2P10415 239 aa6.19□□□□□ -1.42
RDH11-210ENST00000557331 RPL18AQ02543 176 aaKnown RBP6.19□□□□□ -1.42
RDH11-210ENST00000557331 TMEM18Q96B42 140 aa6.19□□□□□ -1.42
RDH11-210ENST00000557331 MRPL35Q9NZE8 188 aaKnown RBP6.19□□□□□ -1.42
RDH11-210ENST00000557331 VCYO14598 125 aa6.18□□□□□ -1.42
RDH11-210ENST00000557331 TSHBP01222 138 aa6.18□□□□□ -1.42
RDH11-210ENST00000557331 POLR2KP53803 58 aaKnown RBP6.18□□□□□ -1.42
RDH11-210ENST00000557331 TRBV20OR9-2A0A075B6H5 130 aa6.17□□□□□ -1.42
RDH11-210ENST00000557331 TCAPO15273 167 aa6.17□□□□□ -1.42
RDH11-210ENST00000557331 TLX1NBP0CAT3 122 aa6.17□□□□□ -1.42
RDH11-210ENST00000557331 FCER1GP30273 86 aa6.17□□□□□ -1.42
RDH11-210ENST00000557331 FOXA3P55318 350 aaPredicted RBP6.17□□□□□ -1.42
RDH11-210ENST00000557331 PHF5AQ7RTV0 110 aaKnown RBP6.17□□□□□ -1.42
RDH11-210ENST00000557331 NDUFA1O15239 70 aa6.16□□□□□ -1.42
RDH11-210ENST00000557331 SPAG11BQ08648 103 aa6.16□□□□□ -1.42
RDH11-210ENST00000557331 CT83Q5H943 113 aa6.16□□□□□ -1.42
RDH11-210ENST00000557331 KIR2DL4Q99706 377 aa6.16□□□□□ -1.42
RDH11-210ENST00000557331 TIMM21Q9BVV7 248 aa6.16□□□□□ -1.42
RDH11-210ENST00000557331 TMEM191AQ9H0A3 160 aa6.16□□□□□ -1.42
RDH11-210ENST00000557331 TMEM242Q9NWH2 141 aa6.16□□□□□ -1.42
RDH11-210ENST00000557331 FAT4Q6V0I7 4981 aa6.15□□□□□ -1.42
RDH11-210ENST00000557331 TRAV13-1A0A0B4J241 112 aa6.15□□□□□ -1.42
RDH11-210ENST00000557331 PPP1R2P9O14990 202 aa6.15□□□□□ -1.42
RDH11-210ENST00000557331 FAM231DQ6ZW35 169 aa6.15□□□□□ -1.42
RDH11-210ENST00000557331 RNASE7Q9H1E1 156 aaKnown RBP6.15□□□□□ -1.42
RDH11-210ENST00000557331 BATF3Q9NR55 127 aa6.15□□□□□ -1.42
RDH11-210ENST00000557331 A0A1B0GUT8 65 aa6.14□□□□□ -1.43
RDH11-210ENST00000557331 GATCO43716 136 aaKnown RBP6.14□□□□□ -1.43
RDH11-210ENST00000557331 KRTAP1-4P0C5Y4 121 aa6.14□□□□□ -1.43
RDH11-210ENST00000557331 OCC1Q8TAD7 63 aa6.14□□□□□ -1.43
RDH11-210ENST00000557331 OPRPNQ99935 248 aaPredicted RBP6.14□□□□□ -1.43
RDH11-210ENST00000557331 UBE2BP63146 152 aa6.13□□□□□ -1.43
RDH11-210ENST00000557331 RGS21Q2M5E4 152 aa6.13□□□□□ -1.43
RDH11-210ENST00000557331 C5orf38Q86SI9 138 aa6.13□□□□□ -1.43
RDH11-210ENST00000557331 UBE2D4Q9Y2X8 147 aa6.13□□□□□ -1.43
RDH11-210ENST00000557331 TMEM250H0YL14 139 aa6.12□□□□□ -1.43
RDH11-210ENST00000557331 K7EN84 100 aa6.12□□□□□ -1.43
RDH11-210ENST00000557331 SUMO2P61956 95 aaKnown RBP6.12□□□□□ -1.43
RDH11-210ENST00000557331 ORAOV1Q8WV07 137 aa6.12□□□□□ -1.43
RDH11-210ENST00000557331 IGHV3OR16-9A0A0B4J2B5 98 aa6.11□□□□□ -1.43
RDH11-210ENST00000557331 TRBV30A0A0K0K1B3 111 aa6.11□□□□□ -1.43
RDH11-210ENST00000557331 KRTAP9-6A0A140TA67 174 aa6.11□□□□□ -1.43
RDH11-210ENST00000557331 ZNF861PO60384 105 aa6.11□□□□□ -1.43
RDH11-210ENST00000557331 RAB4AP20338 218 aa6.11□□□□□ -1.43
RDH11-210ENST00000557331 SMDT1Q9H4I9 107 aa6.11□□□□□ -1.43
RDH11-210ENST00000557331 SMLR1H3BR10 107 aa6.1□□□□□ -1.43
RDH11-210ENST00000557331 M0QXV9 152 aa6.1□□□□□ -1.43
RDH11-210ENST00000557331 NUPR1O60356 82 aa6.1□□□□□ -1.43
RDH11-210ENST00000557331 CTAG1AP78358 180 aa6.1□□□□□ -1.43
RDH11-210ENST00000557331 LCE2AQ5TA79 106 aaPredicted RBP6.1□□□□□ -1.43
RDH11-210ENST00000557331 C20orf78Q9BR46 151 aa6.1□□□□□ -1.43
RDH11-210ENST00000557331 SPANXA1Q9NS26 97 aa6.1□□□□□ -1.43
RDH11-210ENST00000557331 TGIF2-C20orf24A0A0A6YYL0 155 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms