RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 PYGO1Q9Y3Y4 419 aa6.74□□□□□ -1.33
SYNE3-205ENST00000557275 hDV103S1A0JD37 113 aa6.73□□□□□ -1.33
SYNE3-205ENST00000557275 M0R378 163 aa6.73□□□□□ -1.33
SYNE3-205ENST00000557275 CRYGDP07320 174 aa6.73□□□□□ -1.33
SYNE3-205ENST00000557275 TDRG1Q3Y452 100 aa6.73□□□□□ -1.33
SYNE3-205ENST00000557275 ESM1Q9NQ30 184 aa6.73□□□□□ -1.33
SYNE3-205ENST00000557275 TPSG1Q9NRR2 321 aa6.73□□□□□ -1.33
SYNE3-205ENST00000557275 TMEM254Q8TBM7 123 aa6.73□□□□□ -1.33
SYNE3-205ENST00000557275 A0A0J9YX75 114 aa6.72□□□□□ -1.33
SYNE3-205ENST00000557275 C5orf56Q8N8D9 126 aa6.72□□□□□ -1.33
SYNE3-205ENST00000557275 C3orf84H3BNL1 204 aa6.72□□□□□ -1.33
SYNE3-205ENST00000557275 IGHV7-81A0A0B4J1V7 117 aa6.72□□□□□ -1.33
SYNE3-205ENST00000557275 CFAP126Q5VTH2 177 aa6.72□□□□□ -1.33
SYNE3-205ENST00000557275 HECTD1Q9ULT8 2610 aa6.72□□□□□ -1.33
SYNE3-205ENST00000557275 SPRY2O43597 315 aa6.72□□□□□ -1.33
SYNE3-205ENST00000557275 EBI3Q14213 229 aa6.72□□□□□ -1.33
SYNE3-205ENST00000557275 LINC00269Q8N2A0 174 aa6.72□□□□□ -1.33
SYNE3-205ENST00000557275 CHCHD10Q8WYQ3 142 aaPredicted RBP6.72□□□□□ -1.33
SYNE3-205ENST00000557275 TRBV6-5A0A0K0K1A5 114 aa6.72□□□□□ -1.33
SYNE3-205ENST00000557275 C11orf45Q8TAV5 145 aa6.72□□□□□ -1.33
SYNE3-205ENST00000557275 ZFAND3Q9H8U3 227 aa6.72□□□□□ -1.33
SYNE3-205ENST00000557275 IGLV3-1P01715 115 aa6.72□□□□□ -1.33
SYNE3-205ENST00000557275 IGF1P05019 195 aa6.72□□□□□ -1.33
SYNE3-205ENST00000557275 PRORYQ9H606 182 aa6.71□□□□□ -1.33
SYNE3-205ENST00000557275 FAM167A-AS1Q96KT0 104 aa6.71□□□□□ -1.33
SYNE3-205ENST00000557275 C19orf71A6NCJ1 209 aa6.71□□□□□ -1.33
SYNE3-205ENST00000557275 SIRPDQ9H106 197 aa6.71□□□□□ -1.33
SYNE3-205ENST00000557275 HILS1P60008 231 aa6.71□□□□□ -1.34
SYNE3-205ENST00000557275 IGKV1D-37A0A075B6S9 117 aa6.71□□□□□ -1.34
SYNE3-205ENST00000557275 NANOS2P60321 138 aaKnown RBP6.71□□□□□ -1.34
SYNE3-205ENST00000557275 F8WDY8 70 aa6.71□□□□□ -1.34
SYNE3-205ENST00000557275 AJUBAQ96IF1 538 aa6.71□□□□□ -1.34
SYNE3-205ENST00000557275 LINC00694P0DN24 101 aa6.7□□□□□ -1.34
SYNE3-205ENST00000557275 Q0VFX4 171 aa6.7□□□□□ -1.34
SYNE3-205ENST00000557275 APRG1Q8IVJ8 170 aa6.7□□□□□ -1.34
SYNE3-205ENST00000557275 SLURP1P55000 103 aa6.7□□□□□ -1.34
SYNE3-205ENST00000557275 TRBV10-3A0A0K0K1G6 114 aa6.7□□□□□ -1.34
SYNE3-205ENST00000557275 CD164L2Q6UWJ8 174 aa6.7□□□□□ -1.34
SYNE3-205ENST00000557275 RPL28P46779 137 aaKnown RBP6.7□□□□□ -1.34
SYNE3-205ENST00000557275 LOC107984640A0A0U1RRK4 108 aa6.7□□□□□ -1.34
SYNE3-205ENST00000557275 DEFB135Q30KP9 77 aa6.7□□□□□ -1.34
SYNE3-205ENST00000557275 IGKV2-24A0A0C4DH68 120 aa6.69□□□□□ -1.34
SYNE3-205ENST00000557275 PRSS33Q8NF86 280 aa6.69□□□□□ -1.34
SYNE3-205ENST00000557275 CEP295Q9C0D2 2601 aa6.69□□□□□ -1.34
SYNE3-205ENST00000557275 IGLV2-23P01705 113 aa6.69□□□□□ -1.34
SYNE3-205ENST00000557275 IGF2-ASQ6U949 168 aa6.69□□□□□ -1.34
SYNE3-205ENST00000557275 TRBV6-4A0A1B0GX49 114 aa6.69□□□□□ -1.34
SYNE3-205ENST00000557275 MRGPRG-AS1Q2M3A8 158 aa6.69□□□□□ -1.34
SYNE3-205ENST00000557275 C6orf99Q4VX62 202 aa6.69□□□□□ -1.34
SYNE3-205ENST00000557275 M0QXV9 152 aa6.68□□□□□ -1.34
SYNE3-205ENST00000557275 Q6ZR03 302 aa6.68□□□□□ -1.34
SYNE3-205ENST00000557275 ZNF73O43830 326 aaPredicted RBP6.68□□□□□ -1.34
SYNE3-205ENST00000557275 LY6HO94772 140 aa6.68□□□□□ -1.34
SYNE3-205ENST00000557275 P0C879 139 aa6.68□□□□□ -1.34
SYNE3-205ENST00000557275 SPAG11AQ6PDA7 123 aa6.68□□□□□ -1.34
SYNE3-205ENST00000557275 HRCT1Q6UXD1 115 aa6.68□□□□□ -1.34
SYNE3-205ENST00000557275 LINC00173Q6ZV60 143 aa6.68□□□□□ -1.34
SYNE3-205ENST00000557275 BPTFQ12830 3046 aa6.68□□□□□ -1.34
SYNE3-205ENST00000557275 A0A1B0GW54 56 aa6.68□□□□□ -1.34
SYNE3-205ENST00000557275 SYCNQ0VAF6 134 aa6.67□□□□□ -1.34
SYNE3-205ENST00000557275 RNF144BQ7Z419 303 aa6.67□□□□□ -1.34
SYNE3-205ENST00000557275 FAM19A5Q7Z5A7 132 aaPredicted RBP6.67□□□□□ -1.34
SYNE3-205ENST00000557275 ARTNQ5T4W7 220 aa6.67□□□□□ -1.34
SYNE3-205ENST00000557275 TRBV6-8A0A0A6YYG3 113 aa6.67□□□□□ -1.34
SYNE3-205ENST00000557275 WFDC13Q8IUB5 93 aa6.67□□□□□ -1.34
SYNE3-205ENST00000557275 ZNRD1Q9P1U0 126 aa6.67□□□□□ -1.34
SYNE3-205ENST00000557275 ATRQ13535 2644 aa6.67□□□□□ -1.34
SYNE3-205ENST00000557275 IGHV4-30-2A0A087WSY4 118 aa6.67□□□□□ -1.34
SYNE3-205ENST00000557275 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.67□□□□□ -1.34
SYNE3-205ENST00000557275 TP53AIP1Q9HCN2 124 aa6.67□□□□□ -1.34
SYNE3-205ENST00000557275 IGLV4-69A0A075B6H9 119 aa6.67□□□□□ -1.34
SYNE3-205ENST00000557275 LY6LH3BQJ8 138 aa6.67□□□□□ -1.34
SYNE3-205ENST00000557275 ZNF581Q9P0T4 197 aa6.67□□□□□ -1.34
SYNE3-205ENST00000557275 RBX1P62877 108 aa6.67□□□□□ -1.34
SYNE3-205ENST00000557275 Q6ZQY7 126 aa6.66□□□□□ -1.34
SYNE3-205ENST00000557275 C8orf87E5RJ46 101 aa6.66□□□□□ -1.34
SYNE3-205ENST00000557275 SCXQ7RTU7 201 aa6.66□□□□□ -1.34
SYNE3-205ENST00000557275 DEFB136Q30KP8 78 aa6.66□□□□□ -1.34
SYNE3-205ENST00000557275 CCDC179H3BU77 68 aa6.66□□□□□ -1.34
SYNE3-205ENST00000557275 NTM-AS1Q6ZSK4 140 aa6.66□□□□□ -1.34
SYNE3-205ENST00000557275 U3KQK5 164 aa6.66□□□□□ -1.34
SYNE3-205ENST00000557275 MRPS12O15235 138 aaKnown RBP6.66□□□□□ -1.34
SYNE3-205ENST00000557275 MSRB1Q9NZV6 116 aa6.66□□□□□ -1.34
SYNE3-205ENST00000557275 IGLV4-3A0A075B6K6 122 aa6.66□□□□□ -1.34
SYNE3-205ENST00000557275 CDKN2A-AS1Q9UH64 79 aa6.66□□□□□ -1.34
SYNE3-205ENST00000557275 DEFB113Q30KQ7 82 aa6.66□□□□□ -1.34
SYNE3-205ENST00000557275 ESRGQ1W209 222 aa6.65□□□□□ -1.34
SYNE3-205ENST00000557275 ZNF22P17026 224 aaPredicted RBP6.65□□□□□ -1.35
SYNE3-205ENST00000557275 CTSZQ9UBR2 303 aa6.65□□□□□ -1.35
SYNE3-205ENST00000557275 TRBV7-7A0A0K0K1E9 115 aa6.65□□□□□ -1.35
SYNE3-205ENST00000557275 SRCAPQ6ZRS2 3230 aa6.65□□□□□ -1.35
SYNE3-205ENST00000557275 Q8IZM0 81 aa6.64□□□□□ -1.35
SYNE3-205ENST00000557275 LINC00467Q9BRT7 94 aa6.64□□□□□ -1.35
SYNE3-205ENST00000557275 A0A0J9YWU9 116 aa6.64□□□□□ -1.35
SYNE3-205ENST00000557275 LINC00208Q96KT6 92 aa6.64□□□□□ -1.35
SYNE3-205ENST00000557275 IGHV4-38-2P0DP08 117 aa6.64□□□□□ -1.35
SYNE3-205ENST00000557275 AKAP13Q12802 2813 aa6.63□□□□□ -1.35
SYNE3-205ENST00000557275 MAP6D1Q9H9H5 199 aa6.63□□□□□ -1.35
SYNE3-205ENST00000557275 FLNBO75369 2602 aaKnown RBP6.63□□□□□ -1.35
SYNE3-205ENST00000557275 NUPR1O60356 82 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms