RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 STPG4Q8N801 248 aa3.18□□□□□ -1.9
SRP54-212ENST00000556992 NEXN-AS1Q8NBZ9 246 aa3.18□□□□□ -1.9
SRP54-212ENST00000556992 CSNK1G2-AS1Q8NCQ2 148 aa3.18□□□□□ -1.9
SRP54-212ENST00000556992 KIR2DL5BQ8NHK3 375 aa3.18□□□□□ -1.9
SRP54-212ENST00000556992 RNASE8Q8TDE3 154 aaKnown RBP3.18□□□□□ -1.9
SRP54-212ENST00000556992 TIMM17AQ99595 171 aa3.18□□□□□ -1.9
SRP54-212ENST00000556992 C2orf88Q9BSF0 95 aa3.18□□□□□ -1.9
SRP54-212ENST00000556992 CST9LQ9H4G1 147 aa3.18□□□□□ -1.9
SRP54-212ENST00000556992 MRPL16Q9NX20 251 aaKnown RBP3.18□□□□□ -1.9
SRP54-212ENST00000556992 HHLA3Q9XRX5 114 aa3.18□□□□□ -1.9
SRP54-212ENST00000556992 CHTOPQ9Y3Y2 248 aaKnown RBP3.18□□□□□ -1.9
SRP54-212ENST00000556992 TRGV2A0A075B6R0 118 aa3.17□□□□□ -1.9
SRP54-212ENST00000556992 IGHV3-73A0A0B4J1V6 119 aa3.17□□□□□ -1.9
SRP54-212ENST00000556992 TRAV4A0A0B4J268 109 aa3.17□□□□□ -1.9
SRP54-212ENST00000556992 F8VRH5 84 aa3.17□□□□□ -1.9
SRP54-212ENST00000556992 TSHBP01222 138 aa3.17□□□□□ -1.9
SRP54-212ENST00000556992 APOC4P55056 127 aa3.17□□□□□ -1.9
SRP54-212ENST00000556992 SMAGPQ0VAQ4 97 aa3.17□□□□□ -1.9
SRP54-212ENST00000556992 PMVKQ15126 192 aa3.17□□□□□ -1.9
SRP54-212ENST00000556992 COL5A1-AS1Q5SY13 56 aa3.17□□□□□ -1.9
SRP54-212ENST00000556992 LCE3CQ5T5A8 94 aa3.17□□□□□ -1.9
SRP54-212ENST00000556992 C12orf54Q6X4T0 127 aa3.17□□□□□ -1.9
SRP54-212ENST00000556992 NEGR1Q7Z3B1 354 aa3.17□□□□□ -1.9
SRP54-212ENST00000556992 BOD1L2Q8IYS8 172 aa3.17□□□□□ -1.9
SRP54-212ENST00000556992 C3orf56Q8N813 242 aa3.17□□□□□ -1.9
SRP54-212ENST00000556992 C20orf203Q8NBC4 194 aa3.17□□□□□ -1.9
SRP54-212ENST00000556992 VCX2Q9H322 139 aa3.17□□□□□ -1.9
SRP54-212ENST00000556992 NOP10Q9NPE3 64 aaKnown RBP3.17□□□□□ -1.9
SRP54-212ENST00000556992 MRPL35Q9NZE8 188 aaKnown RBP3.17□□□□□ -1.9
SRP54-212ENST00000556992 TP53TG1Q9Y2A0 90 aa3.17□□□□□ -1.9
SRP54-212ENST00000556992 PYGO1Q9Y3Y4 419 aa3.17□□□□□ -1.9
SRP54-212ENST00000556992 PCLOQ9Y6V0 5065 aa3.16□□□□□ -1.9
SRP54-212ENST00000556992 TRBV7-3A0A075B6L6 115 aa3.16□□□□□ -1.9
SRP54-212ENST00000556992 TRBV6-4A0A1B0GX49 114 aa3.16□□□□□ -1.9
SRP54-212ENST00000556992 P0DMU3 169 aa3.16□□□□□ -1.9
SRP54-212ENST00000556992 FAM231AP0DMU4 169 aa3.16□□□□□ -1.9
SRP54-212ENST00000556992 FAM231CP0DMU5 169 aa3.16□□□□□ -1.9
SRP54-212ENST00000556992 COTL1Q14019 142 aa3.16□□□□□ -1.9
SRP54-212ENST00000556992 TMEM97Q5BJF2 176 aa3.16□□□□□ -1.9
SRP54-212ENST00000556992 Q6ZTI0 123 aa3.16□□□□□ -1.9
SRP54-212ENST00000556992 DAZ4Q86SG3 579 aaKnown RBP3.16□□□□□ -1.9
SRP54-212ENST00000556992 BAALCQ8WXS3 180 aa3.16□□□□□ -1.9
SRP54-212ENST00000556992 SNHG12Q9BXW3 62 aa3.16□□□□□ -1.9
SRP54-212ENST00000556992 DAZ3Q9NR90 486 aaKnown RBP3.16□□□□□ -1.9
SRP54-212ENST00000556992 SPANXA1Q9NS26 97 aa3.16□□□□□ -1.9
SRP54-212ENST00000556992 CR1P17927 2039 aa3.15□□□□□ -1.9
SRP54-212ENST00000556992 RYR1P21817 5038 aa3.15□□□□□ -1.9
SRP54-212ENST00000556992 TRGV4A0A0C4DH28 118 aa3.15□□□□□ -1.91
SRP54-212ENST00000556992 GAGE7O76087 117 aa3.15□□□□□ -1.91
SRP54-212ENST00000556992 GAGE12FP0CL80 117 aa3.15□□□□□ -1.91
SRP54-212ENST00000556992 GAGE12GP0CL81 117 aa3.15□□□□□ -1.91
SRP54-212ENST00000556992 GAGE12IP0CL82 117 aa3.15□□□□□ -1.91
SRP54-212ENST00000556992 NMUP48645 174 aa3.15□□□□□ -1.91
SRP54-212ENST00000556992 HERVK_113P61574 105 aa3.15□□□□□ -1.91
SRP54-212ENST00000556992 RPL39P62891 51 aaKnown RBP3.15□□□□□ -1.91
SRP54-212ENST00000556992 ZC2HC1BQ5TFG8 222 aa3.15□□□□□ -1.91
SRP54-212ENST00000556992 DGAT2L7PQ6IED9 249 aa3.15□□□□□ -1.91
SRP54-212ENST00000556992 ZNRF2Q8NHG8 242 aa3.15□□□□□ -1.91
SRP54-212ENST00000556992 PRADC1Q9BSG0 188 aa3.15□□□□□ -1.91
SRP54-212ENST00000556992 TIMM21Q9BVV7 248 aa3.15□□□□□ -1.91
SRP54-212ENST00000556992 WFDC10AQ9H1F0 79 aa3.15□□□□□ -1.91
SRP54-212ENST00000556992 GTSF1LQ9H1H1 148 aa3.15□□□□□ -1.91
SRP54-212ENST00000556992 WNK1Q9H4A3 2382 aa3.15□□□□□ -1.91
SRP54-212ENST00000556992 PLAC8L1A1L4L8 177 aa3.14□□□□□ -1.91
SRP54-212ENST00000556992 GAGE12JA6NER3 117 aa3.14□□□□□ -1.91
SRP54-212ENST00000556992 LYRM9A8MSI8 78 aa3.14□□□□□ -1.91
SRP54-212ENST00000556992 E9PLD3 99 aa3.14□□□□□ -1.91
SRP54-212ENST00000556992 H7C423 109 aa3.14□□□□□ -1.91
SRP54-212ENST00000556992 K7EQD1 137 aa3.14□□□□□ -1.91
SRP54-212ENST00000556992 FGF6P10767 208 aa3.14□□□□□ -1.91
SRP54-212ENST00000556992 HINT1P49773 126 aaPredicted RBP3.14□□□□□ -1.91
SRP54-212ENST00000556992 EMP1P54849 157 aa3.14□□□□□ -1.91
SRP54-212ENST00000556992 UBE2D3P61077 147 aa3.14□□□□□ -1.91
SRP54-212ENST00000556992 UBE2D2P62837 147 aa3.14□□□□□ -1.91
SRP54-212ENST00000556992 MRPS36P82909 103 aaKnown RBP3.14□□□□□ -1.91
SRP54-212ENST00000556992 BATFQ16520 125 aa3.14□□□□□ -1.91
SRP54-212ENST00000556992 NFE4Q86UQ8 179 aa3.14□□□□□ -1.91
SRP54-212ENST00000556992 LINC00612Q8N6U2 182 aa3.14□□□□□ -1.91
SRP54-212ENST00000556992 SLC25A29Q8N8R3 303 aa3.14□□□□□ -1.91
SRP54-212ENST00000556992 OR11H2Q8NH07 326 aa3.14□□□□□ -1.91
SRP54-212ENST00000556992 HIGD1BQ9P298 99 aa3.14□□□□□ -1.91
SRP54-212ENST00000556992 CSDC2Q9Y534 153 aaKnown RBP3.14□□□□□ -1.91
SRP54-212ENST00000556992 OBSCNQ5VST9 7968 aa3.14□□□□□ -1.91
SRP54-212ENST00000556992 VWFP04275 2813 aa3.13□□□□□ -1.91
SRP54-212ENST00000556992 IGLV4-3A0A075B6K6 122 aa3.13□□□□□ -1.91
SRP54-212ENST00000556992 TRAV8-6A0A0B4J262 113 aa3.13□□□□□ -1.91
SRP54-212ENST00000556992 MYMXA0A1B0GTQ4 84 aa3.13□□□□□ -1.91
SRP54-212ENST00000556992 C11orf86A6NJI1 115 aa3.13□□□□□ -1.91
SRP54-212ENST00000556992 A8MZ25 164 aa3.13□□□□□ -1.91
SRP54-212ENST00000556992 SPART-AS1P0CW21 52 aa3.13□□□□□ -1.91
SRP54-212ENST00000556992 DEFB130BP0DP73 79 aa3.13□□□□□ -1.91
SRP54-212ENST00000556992 DEFB130AP0DP74 79 aa3.13□□□□□ -1.91
SRP54-212ENST00000556992 MIFP14174 115 aa3.13□□□□□ -1.91
SRP54-212ENST00000556992 SEC11AP67812 179 aa3.13□□□□□ -1.91
SRP54-212ENST00000556992 HSD52Q0P140 79 aa3.13□□□□□ -1.91
SRP54-212ENST00000556992 GAGE1Q13065 139 aa3.13□□□□□ -1.91
SRP54-212ENST00000556992 GAGE4Q13068 117 aa3.13□□□□□ -1.91
SRP54-212ENST00000556992 GAGE5Q13069 117 aa3.13□□□□□ -1.91
SRP54-212ENST00000556992 TAL2Q16559 108 aa3.13□□□□□ -1.91
SRP54-212ENST00000556992 MPV17L2Q567V2 206 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms