RNA–Protein interactions for RNA: ENST00000556782.5

PRPF39-211, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 645 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-211ENST00000556782 TMEM243Q9BU79 118 aa3.48□□□□□ -1.85
PRPF39-211ENST00000556782 CHAC1Q9BUX1 264 aa3.48□□□□□ -1.85
PRPF39-211ENST00000556782 IGLV4-60A0A075B6I1 120 aa3.47□□□□□ -1.85
PRPF39-211ENST00000556782 IGLV10-54A0A075B6I4 117 aa3.47□□□□□ -1.85
PRPF39-211ENST00000556782 TRAV26-2A0A0B4J265 109 aa3.47□□□□□ -1.85
PRPF39-211ENST00000556782 A0A1B0GUV1 79 aa3.47□□□□□ -1.85
PRPF39-211ENST00000556782 GATCO43716 136 aaKnown RBP3.47□□□□□ -1.85
PRPF39-211ENST00000556782 PRSS1P07477 247 aa3.47□□□□□ -1.85
PRPF39-211ENST00000556782 AMTP48728 403 aa3.47□□□□□ -1.85
PRPF39-211ENST00000556782 CEBPGP53567 150 aa3.47□□□□□ -1.85
PRPF39-211ENST00000556782 COTL1Q14019 142 aa3.47□□□□□ -1.85
PRPF39-211ENST00000556782 PRR26Q8N8Z3 221 aa3.47□□□□□ -1.85
PRPF39-211ENST00000556782 CIRBP-AS1Q8TBR5 109 aa3.47□□□□□ -1.85
PRPF39-211ENST00000556782 DEFB104AQ8WTQ1 72 aa3.47□□□□□ -1.85
PRPF39-211ENST00000556782 GFRA4Q9GZZ7 299 aa3.47□□□□□ -1.85
PRPF39-211ENST00000556782 TRAV8-4A0A0B4J246 113 aa3.46□□□□□ -1.86
PRPF39-211ENST00000556782 A8MWL6 223 aa3.46□□□□□ -1.86
PRPF39-211ENST00000556782 UBE2L6O14933 153 aa3.46□□□□□ -1.86
PRPF39-211ENST00000556782 NDUFS6O75380 124 aaKnown RBP3.46□□□□□ -1.86
PRPF39-211ENST00000556782 FOXA3P55318 350 aaPredicted RBP3.46□□□□□ -1.86
PRPF39-211ENST00000556782 KRTAP10-4P60372 401 aaPredicted RBP3.46□□□□□ -1.86
PRPF39-211ENST00000556782 SMIM15Q7Z3B0 74 aa3.46□□□□□ -1.86
PRPF39-211ENST00000556782 LINC01551Q86U37 167 aa3.46□□□□□ -1.86
PRPF39-211ENST00000556782 C9orf163Q8N9P6 203 aa3.46□□□□□ -1.86
PRPF39-211ENST00000556782 RPL39LQ96EH5 51 aaKnown RBP3.46□□□□□ -1.86
PRPF39-211ENST00000556782 FAM210AQ96ND0 272 aa3.46□□□□□ -1.86
PRPF39-211ENST00000556782 SMIM7Q9BQ49 75 aa3.46□□□□□ -1.86
PRPF39-211ENST00000556782 EIF5A2Q9GZV4 153 aaKnown RBP3.46□□□□□ -1.86
PRPF39-211ENST00000556782 FAT3Q8TDW7 4589 aa3.46□□□□□ -1.86
PRPF39-211ENST00000556782 SDHAF1A6NFY7 115 aa3.45□□□□□ -1.86
PRPF39-211ENST00000556782 HIGD1CA8MV81 97 aa3.45□□□□□ -1.86
PRPF39-211ENST00000556782 NCR2O95944 276 aa3.45□□□□□ -1.86
PRPF39-211ENST00000556782 APCSP02743 223 aa3.45□□□□□ -1.86
PRPF39-211ENST00000556782 SRP19P09132 144 aaKnown RBP3.45□□□□□ -1.86
PRPF39-211ENST00000556782 CNBPP62633 177 aaKnown RBP3.45□□□□□ -1.86
PRPF39-211ENST00000556782 TEX261Q6UWH6 196 aa3.45□□□□□ -1.86
PRPF39-211ENST00000556782 TSKUQ8WUA8 353 aa3.45□□□□□ -1.86
PRPF39-211ENST00000556782 BORCS7Q96B45 105 aa3.45□□□□□ -1.86
PRPF39-211ENST00000556782 OSTCQ9NRP0 149 aa3.45□□□□□ -1.86
PRPF39-211ENST00000556782 PKHD1L1Q86WI1 4243 aa3.45□□□□□ -1.86
PRPF39-211ENST00000556782 LRP1Q07954 4544 aaKnown RBP3.44□□□□□ -1.86
PRPF39-211ENST00000556782 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.44□□□□□ -1.86
PRPF39-211ENST00000556782 TRBV6-5A0A0K0K1A5 114 aa3.44□□□□□ -1.86
PRPF39-211ENST00000556782 A0A1B0GUT8 65 aa3.44□□□□□ -1.86
PRPF39-211ENST00000556782 A0A1B0GVG6 124 aa3.44□□□□□ -1.86
PRPF39-211ENST00000556782 hDV102S1A0JD36 115 aa3.44□□□□□ -1.86
PRPF39-211ENST00000556782 IGKV2-29A2NJV5 120 aaPredicted RBP3.44□□□□□ -1.86
PRPF39-211ENST00000556782 FAM231BA6NCW3 169 aa3.44□□□□□ -1.86
PRPF39-211ENST00000556782 ZNF727A8MUV8 499 aa3.44□□□□□ -1.86
PRPF39-211ENST00000556782 H7C423 109 aa3.44□□□□□ -1.86
PRPF39-211ENST00000556782 PANO1I0J062 215 aa3.44□□□□□ -1.86
PRPF39-211ENST00000556782 SDIM1Q6ZPB5 146 aa3.44□□□□□ -1.86
PRPF39-211ENST00000556782 C15orf56Q8N910 161 aa3.44□□□□□ -1.86
PRPF39-211ENST00000556782 TMEM191AQ9H0A3 160 aa3.44□□□□□ -1.86
PRPF39-211ENST00000556782 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.43□□□□□ -1.86
PRPF39-211ENST00000556782 IGKV3OR2-268A0A0C4DH90 116 aa3.43□□□□□ -1.86
PRPF39-211ENST00000556782 I3L3M4 83 aa3.43□□□□□ -1.86
PRPF39-211ENST00000556782 TSHBP01222 138 aa3.43□□□□□ -1.86
PRPF39-211ENST00000556782 FGF6P10767 208 aa3.43□□□□□ -1.86
PRPF39-211ENST00000556782 ESDP10768 282 aa3.43□□□□□ -1.86
PRPF39-211ENST00000556782 ZNF25P17030 456 aaPredicted RBP3.43□□□□□ -1.86
PRPF39-211ENST00000556782 RAB4AP20338 218 aa3.43□□□□□ -1.86
PRPF39-211ENST00000556782 PMCHP20382 165 aa3.43□□□□□ -1.86
PRPF39-211ENST00000556782 RPL37AP61513 92 aaKnown RBP3.43□□□□□ -1.86
PRPF39-211ENST00000556782 CIRBPQ14011 172 aaKnown RBP3.43□□□□□ -1.86
PRPF39-211ENST00000556782 AMMECR1LQ6DCA0 310 aa3.43□□□□□ -1.86
PRPF39-211ENST00000556782 RNASEKQ6P5S7 137 aaKnown RBP3.43□□□□□ -1.86
PRPF39-211ENST00000556782 CHCHD10Q8WYQ3 142 aaPredicted RBP3.43□□□□□ -1.86
PRPF39-211ENST00000556782 ISOC2Q96AB3 205 aa3.43□□□□□ -1.86
PRPF39-211ENST00000556782 MRAP2Q96G30 205 aa3.43□□□□□ -1.86
PRPF39-211ENST00000556782 RNF185Q96GF1 192 aa3.43□□□□□ -1.86
PRPF39-211ENST00000556782 ST20Q9HBF5 79 aa3.43□□□□□ -1.86
PRPF39-211ENST00000556782 TMEM242Q9NWH2 141 aa3.43□□□□□ -1.86
PRPF39-211ENST00000556782 V9GYV3 84 aa3.43□□□□□ -1.86
PRPF39-211ENST00000556782 DMBT1Q9UGM3 2413 aaPredicted RBP3.42□□□□□ -1.86
PRPF39-211ENST00000556782 IGHV3-64A0A075B6Q5 118 aa3.42□□□□□ -1.86
PRPF39-211ENST00000556782 A0A087WYN8 130 aa3.42□□□□□ -1.86
PRPF39-211ENST00000556782 TRBV27A0A0K0K1C4 114 aa3.42□□□□□ -1.86
PRPF39-211ENST00000556782 RPS10P46783 165 aaKnown RBP3.42□□□□□ -1.86
PRPF39-211ENST00000556782 POLR2KP53803 58 aaKnown RBP3.42□□□□□ -1.86
PRPF39-211ENST00000556782 RPL23P62829 140 aaKnown RBP3.42□□□□□ -1.86
PRPF39-211ENST00000556782 RIGQ13278 110 aa3.42□□□□□ -1.86
PRPF39-211ENST00000556782 TMEM241Q24JQ0 296 aa3.42□□□□□ -1.86
PRPF39-211ENST00000556782 HIGD2BQ4VC39 106 aa3.42□□□□□ -1.86
PRPF39-211ENST00000556782 FAM74A3Q4VXF1 159 aa3.42□□□□□ -1.86
PRPF39-211ENST00000556782 CFAP161Q6P656 301 aa3.42□□□□□ -1.86
PRPF39-211ENST00000556782 AMN1Q8IY45 258 aa3.42□□□□□ -1.86
PRPF39-211ENST00000556782 NUP35Q8NFH5 326 aa3.42□□□□□ -1.86
PRPF39-211ENST00000556782 OR5A1Q8NGJ0 315 aa3.42□□□□□ -1.86
PRPF39-211ENST00000556782 TMEM101Q96IK0 257 aa3.42□□□□□ -1.86
PRPF39-211ENST00000556782 BTF3L4Q96K17 158 aa3.42□□□□□ -1.86
PRPF39-211ENST00000556782 OBSCNQ5VST9 7968 aa3.41□□□□□ -1.86
PRPF39-211ENST00000556782 GVQW2A0A096LPI5 108 aaPredicted RBP3.41□□□□□ -1.86
PRPF39-211ENST00000556782 LINC00959A0A1B0GUT2 108 aa3.41□□□□□ -1.86
PRPF39-211ENST00000556782 C7orf77A4D0Y5 90 aa3.41□□□□□ -1.86
PRPF39-211ENST00000556782 GAGE10A6NGK3 116 aa3.41□□□□□ -1.86
PRPF39-211ENST00000556782 C9JQL5 133 aa3.41□□□□□ -1.86
PRPF39-211ENST00000556782 SMKR1H3BMG3 65 aa3.41□□□□□ -1.86
PRPF39-211ENST00000556782 CHTF8P0CG12 524 aa3.41□□□□□ -1.86
PRPF39-211ENST00000556782 HNRNPA3P51991 378 aaKnown RBP3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms