RNA–Protein interactions for RNA: ENST00000556462.1

LINC01550-206, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 2 BASIC

Gene LINC01550, Length 2,098 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-206ENST00000556462 TMEM243Q9BU79 118 aa7.51□□□□□ -1.21
LINC01550-206ENST00000556462 TIMM21Q9BVV7 248 aa7.51□□□□□ -1.21
LINC01550-206ENST00000556462 SPANXA1Q9NS26 97 aa7.51□□□□□ -1.21
LINC01550-206ENST00000556462 STAB2Q8WWQ8 2551 aa7.51□□□□□ -1.21
LINC01550-206ENST00000556462 DEFB131BA0A096LNP1 70 aa7.5□□□□□ -1.21
LINC01550-206ENST00000556462 NPSP0C0P6 89 aa7.5□□□□□ -1.21
LINC01550-206ENST00000556462 FGF6P10767 208 aa7.5□□□□□ -1.21
LINC01550-206ENST00000556462 VAMP8Q9BV40 100 aa7.5□□□□□ -1.21
LINC01550-206ENST00000556462 PAM16Q9Y3D7 125 aa7.5□□□□□ -1.21
LINC01550-206ENST00000556462 ICOSQ9Y6W8 199 aa7.5□□□□□ -1.21
LINC01550-206ENST00000556462 TRAV9-2A0A087WT02 112 aa7.5□□□□□ -1.21
LINC01550-206ENST00000556462 F8VRH5 84 aa7.5□□□□□ -1.21
LINC01550-206ENST00000556462 AMELXQ99217 191 aa7.5□□□□□ -1.21
LINC01550-206ENST00000556462 CHTOPQ9Y3Y2 248 aaKnown RBP7.5□□□□□ -1.21
LINC01550-206ENST00000556462 CSDC2Q9Y534 153 aaKnown RBP7.5□□□□□ -1.21
LINC01550-206ENST00000556462 hDV102S1A0JD36 115 aa7.49□□□□□ -1.21
LINC01550-206ENST00000556462 H7C423 109 aa7.49□□□□□ -1.21
LINC01550-206ENST00000556462 VCX2Q9H322 139 aa7.49□□□□□ -1.21
LINC01550-206ENST00000556462 DPM2O94777 84 aa7.48□□□□□ -1.21
LINC01550-206ENST00000556462 IGKCP01834 107 aa7.48□□□□□ -1.21
LINC01550-206ENST00000556462 MRPS36P82909 103 aaKnown RBP7.48□□□□□ -1.21
LINC01550-206ENST00000556462 RNASE13Q5GAN3 156 aaKnown RBP7.48□□□□□ -1.21
LINC01550-206ENST00000556462 PAPPA-AS1Q5QFB9 102 aa7.48□□□□□ -1.21
LINC01550-206ENST00000556462 Q6ZUT4 128 aa7.48□□□□□ -1.21
LINC01550-206ENST00000556462 SH2D6Q7Z4S9 175 aa7.48□□□□□ -1.21
LINC01550-206ENST00000556462 IGLV4-69A0A075B6H9 119 aa7.48□□□□□ -1.21
LINC01550-206ENST00000556462 UBE2L6O14933 153 aa7.48□□□□□ -1.21
LINC01550-206ENST00000556462 NHLRC4P0CG21 123 aaPredicted RBP7.48□□□□□ -1.21
LINC01550-206ENST00000556462 SPATA45Q537H7 98 aa7.48□□□□□ -1.21
LINC01550-206ENST00000556462 ANKRD39Q53RE8 183 aa7.48□□□□□ -1.21
LINC01550-206ENST00000556462 TRAV10A0A0B4J240 114 aa7.47□□□□□ -1.21
LINC01550-206ENST00000556462 GAGE6Q13070 117 aa7.47□□□□□ -1.21
LINC01550-206ENST00000556462 DGAT2L7PQ6IED9 249 aa7.47□□□□□ -1.21
LINC01550-206ENST00000556462 STPG4Q8N801 248 aa7.47□□□□□ -1.21
LINC01550-206ENST00000556462 MIEN1Q9BRT3 115 aa7.47□□□□□ -1.21
LINC01550-206ENST00000556462 CHCHD5Q9BSY4 110 aa7.47□□□□□ -1.21
LINC01550-206ENST00000556462 CDC42SE2Q9NRR3 84 aa7.47□□□□□ -1.21
LINC01550-206ENST00000556462 PLNP26678 52 aa7.47□□□□□ -1.21
LINC01550-206ENST00000556462 LYPD5Q6UWN5 251 aa7.47□□□□□ -1.21
LINC01550-206ENST00000556462 AMMECR1LQ6DCA0 310 aa7.46□□□□□ -1.22
LINC01550-206ENST00000556462 IGLV4-60A0A075B6I1 120 aa7.45□□□□□ -1.22
LINC01550-206ENST00000556462 C11orf86A6NJI1 115 aa7.45□□□□□ -1.22
LINC01550-206ENST00000556462 SMAGPQ0VAQ4 97 aa7.45□□□□□ -1.22
LINC01550-206ENST00000556462 OR5A1Q8NGJ0 315 aa7.45□□□□□ -1.22
LINC01550-206ENST00000556462 HSBP1L1C9JCN9 74 aa7.45□□□□□ -1.22
LINC01550-206ENST00000556462 LELP1Q5T871 98 aa7.45□□□□□ -1.22
LINC01550-206ENST00000556462 NFE4Q86UQ8 179 aa7.45□□□□□ -1.22
LINC01550-206ENST00000556462 A0A0J9YXV3 536 aa7.44□□□□□ -1.22
LINC01550-206ENST00000556462 A0A1B0GUV1 79 aa7.44□□□□□ -1.22
LINC01550-206ENST00000556462 TIRAPP58753 221 aa7.44□□□□□ -1.22
LINC01550-206ENST00000556462 TMEM101Q96IK0 257 aa7.44□□□□□ -1.22
LINC01550-206ENST00000556462 TMEM262E9PQX1 116 aa7.43□□□□□ -1.22
LINC01550-206ENST00000556462 IGLC3P0DOY3 106 aa7.43□□□□□ -1.22
LINC01550-206ENST00000556462 PCP4P48539 62 aa7.43□□□□□ -1.22
LINC01550-206ENST00000556462 UBE2D1P51668 147 aa7.43□□□□□ -1.22
LINC01550-206ENST00000556462 RBX1P62877 108 aa7.43□□□□□ -1.22
LINC01550-206ENST00000556462 MPV17L2Q567V2 206 aa7.43□□□□□ -1.22
LINC01550-206ENST00000556462 ESRGQ1W209 222 aa7.43□□□□□ -1.22
LINC01550-206ENST00000556462 COL5A1-AS1Q5SY13 56 aa7.43□□□□□ -1.22
LINC01550-206ENST00000556462 TCTAP57738 103 aa7.42□□□□□ -1.22
LINC01550-206ENST00000556462 Q8N3U1 123 aa7.42□□□□□ -1.22
LINC01550-206ENST00000556462 CHAC1Q9BUX1 264 aa7.42□□□□□ -1.22
LINC01550-206ENST00000556462 IGKV2D-26A0A0A0MRZ7 120 aa7.42□□□□□ -1.22
LINC01550-206ENST00000556462 TINCRA0A1B0GVN0 87 aa7.42□□□□□ -1.22
LINC01550-206ENST00000556462 FAM19A3Q7Z5A8 133 aa7.42□□□□□ -1.22
LINC01550-206ENST00000556462 ZNF22P17026 224 aaPredicted RBP7.41□□□□□ -1.22
LINC01550-206ENST00000556462 LINC00242Q5T6M2 205 aa7.41□□□□□ -1.22
LINC01550-206ENST00000556462 C15orf53Q8NAA6 179 aa7.41□□□□□ -1.22
LINC01550-206ENST00000556462 FBN3Q75N90 2809 aa7.4□□□□□ -1.22
LINC01550-206ENST00000556462 TRAV13-1A0A0B4J241 112 aa7.4□□□□□ -1.22
LINC01550-206ENST00000556462 COX6A2Q02221 97 aa7.4□□□□□ -1.22
LINC01550-206ENST00000556462 TMEM170BQ5T4T1 132 aa7.4□□□□□ -1.22
LINC01550-206ENST00000556462 CSMD3Q7Z407 3707 aa7.4□□□□□ -1.22
LINC01550-206ENST00000556462 IGLL5B9A064 214 aa7.4□□□□□ -1.23
LINC01550-206ENST00000556462 COX8AP10176 69 aa7.39□□□□□ -1.23
LINC01550-206ENST00000556462 TP73-AS1Q9UF72 201 aa7.39□□□□□ -1.23
LINC01550-206ENST00000556462 IGLV5-45A0A087WSX0 123 aa7.39□□□□□ -1.23
LINC01550-206ENST00000556462 TRAV8-6A0A0B4J262 113 aa7.39□□□□□ -1.23
LINC01550-206ENST00000556462 TMEM223A0PJW6 202 aa7.39□□□□□ -1.23
LINC01550-206ENST00000556462 E9PLD3 99 aa7.39□□□□□ -1.23
LINC01550-206ENST00000556462 NMUP48645 174 aa7.39□□□□□ -1.23
LINC01550-206ENST00000556462 WFDC10BQ8IUB3 73 aa7.39□□□□□ -1.23
LINC01550-206ENST00000556462 PCP2Q8IVA1 136 aa7.39□□□□□ -1.23
LINC01550-206ENST00000556462 ORAOV1Q8WV07 137 aa7.39□□□□□ -1.23
LINC01550-206ENST00000556462 UQCR10Q9UDW1 63 aa7.39□□□□□ -1.23
LINC01550-206ENST00000556462 DYNC2H1Q8NCM8 4307 aaKnown RBP7.38□□□□□ -1.23
LINC01550-206ENST00000556462 IGKV3OR2-268A0A0C4DH90 116 aa7.38□□□□□ -1.23
LINC01550-206ENST00000556462 C21orf62-AS1Q17RA5 79 aa7.38□□□□□ -1.23
LINC01550-206ENST00000556462 TTTY13Q9BZ97 58 aa7.38□□□□□ -1.23
LINC01550-206ENST00000556462 GEMIN7Q9H840 131 aaKnown RBP7.38□□□□□ -1.23
LINC01550-206ENST00000556462 CDKN2A-AS1Q9UH64 79 aa7.38□□□□□ -1.23
LINC01550-206ENST00000556462 DNAH7Q8WXX0 4024 aa7.37□□□□□ -1.23
LINC01550-206ENST00000556462 LINC00959A0A1B0GUT2 108 aa7.37□□□□□ -1.23
LINC01550-206ENST00000556462 HERVK_113P63121 156 aa7.37□□□□□ -1.23
LINC01550-206ENST00000556462 SEC11AP67812 179 aa7.37□□□□□ -1.23
LINC01550-206ENST00000556462 BOD1L2Q8IYS8 172 aa7.37□□□□□ -1.23
LINC01550-206ENST00000556462 LINC00269Q8N2A0 174 aa7.37□□□□□ -1.23
LINC01550-206ENST00000556462 ANGP03950 147 aaKnown RBP7.37□□□□□ -1.23
LINC01550-206ENST00000556462 SLC25A34Q6PIV7 304 aa7.37□□□□□ -1.23
LINC01550-206ENST00000556462 HERVK_113P61574 105 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms