RNA–Protein interactions for RNA: ENST00000556339.5

ATXN3-240, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 525 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-240ENST00000556339 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.83□□□□□ -1.96
ATXN3-240ENST00000556339 H7C1H1 209 aa2.83□□□□□ -1.96
ATXN3-240ENST00000556339 NCR2O95944 276 aa2.83□□□□□ -1.96
ATXN3-240ENST00000556339 IGKV2D-40P01614 121 aaPredicted RBP2.83□□□□□ -1.96
ATXN3-240ENST00000556339 ZNF876PQ49A33 203 aa2.83□□□□□ -1.96
ATXN3-240ENST00000556339 LYRM7Q5U5X0 104 aa2.83□□□□□ -1.96
ATXN3-240ENST00000556339 NFE4Q86UQ8 179 aa2.83□□□□□ -1.96
ATXN3-240ENST00000556339 POM121L12Q8N7R1 296 aa2.83□□□□□ -1.96
ATXN3-240ENST00000556339 VGLL1Q99990 258 aa2.83□□□□□ -1.96
ATXN3-240ENST00000556339 VPS25Q9BRG1 176 aa2.83□□□□□ -1.96
ATXN3-240ENST00000556339 AGPAT4-IT1Q9H0P7 198 aa2.83□□□□□ -1.96
ATXN3-240ENST00000556339 VCX2Q9H322 139 aa2.83□□□□□ -1.96
ATXN3-240ENST00000556339 NACAE9PAV3 2078 aa2.83□□□□□ -1.96
ATXN3-240ENST00000556339 PLECQ15149 4684 aaKnown RBP2.83□□□□□ -1.96
ATXN3-240ENST00000556339 OBSCNQ5VST9 7968 aa2.82□□□□□ -1.96
ATXN3-240ENST00000556339 STARD9Q9P2P6 4700 aa2.82□□□□□ -1.96
ATXN3-240ENST00000556339 HERC2O95714 4834 aa2.82□□□□□ -1.96
ATXN3-240ENST00000556339 TRBV25-1A0A075B6N4 114 aa2.82□□□□□ -1.96
ATXN3-240ENST00000556339 TMSB15BA0A087X1C1 80 aa2.82□□□□□ -1.96
ATXN3-240ENST00000556339 E9PLD3 99 aa2.82□□□□□ -1.96
ATXN3-240ENST00000556339 F8VRH5 84 aa2.82□□□□□ -1.96
ATXN3-240ENST00000556339 H0Y8G0 127 aa2.82□□□□□ -1.96
ATXN3-240ENST00000556339 H3BUT2 72 aa2.82□□□□□ -1.96
ATXN3-240ENST00000556339 NXPH4O95158 308 aa2.82□□□□□ -1.96
ATXN3-240ENST00000556339 NMUP48645 174 aa2.82□□□□□ -1.96
ATXN3-240ENST00000556339 ZNF80P51504 273 aaPredicted RBP2.82□□□□□ -1.96
ATXN3-240ENST00000556339 ZC2HC1BQ5TFG8 222 aa2.82□□□□□ -1.96
ATXN3-240ENST00000556339 SPANXN1Q5VSR9 72 aa2.82□□□□□ -1.96
ATXN3-240ENST00000556339 FOXI2Q6ZQN5 318 aa2.82□□□□□ -1.96
ATXN3-240ENST00000556339 KRTAP7-1Q8IUC3 87 aa2.82□□□□□ -1.96
ATXN3-240ENST00000556339 CEND1Q8N111 149 aa2.82□□□□□ -1.96
ATXN3-240ENST00000556339 OR10J6PQ8NGY7 276 aa2.82□□□□□ -1.96
ATXN3-240ENST00000556339 TOMM6Q96B49 74 aa2.82□□□□□ -1.96
ATXN3-240ENST00000556339 TMEM141Q96I45 108 aa2.82□□□□□ -1.96
ATXN3-240ENST00000556339 ODF3Q96PU9 254 aa2.82□□□□□ -1.96
ATXN3-240ENST00000556339 LYSTQ99698 3801 aa2.82□□□□□ -1.96
ATXN3-240ENST00000556339 CHAC1Q9BUX1 264 aa2.82□□□□□ -1.96
ATXN3-240ENST00000556339 SMIM2Q9BVW6 85 aa2.82□□□□□ -1.96
ATXN3-240ENST00000556339 DPH3P1Q9H4G8 78 aa2.82□□□□□ -1.96
ATXN3-240ENST00000556339 SPCS1Q9Y6A9 102 aa2.82□□□□□ -1.96
ATXN3-240ENST00000556339 CSMD3Q7Z407 3707 aa2.81□□□□□ -1.96
ATXN3-240ENST00000556339 TRAV8-2A0A0B4J237 113 aa2.81□□□□□ -1.96
ATXN3-240ENST00000556339 TRAV10A0A0B4J240 114 aa2.81□□□□□ -1.96
ATXN3-240ENST00000556339 MYMXA0A1B0GTQ4 84 aa2.81□□□□□ -1.96
ATXN3-240ENST00000556339 KNCNA6PVL3 124 aa2.81□□□□□ -1.96
ATXN3-240ENST00000556339 ZNF688P0C7X2 276 aa2.81□□□□□ -1.96
ATXN3-240ENST00000556339 ID1P41134 155 aa2.81□□□□□ -1.96
ATXN3-240ENST00000556339 ASIPP42127 132 aa2.81□□□□□ -1.96
ATXN3-240ENST00000556339 TCTAP57738 103 aa2.81□□□□□ -1.96
ATXN3-240ENST00000556339 HERVK_113P61574 105 aa2.81□□□□□ -1.96
ATXN3-240ENST00000556339 SNRPD3P62318 126 aaKnown RBP2.81□□□□□ -1.96
ATXN3-240ENST00000556339 MORN3Q6PF18 240 aaPredicted RBP2.81□□□□□ -1.96
ATXN3-240ENST00000556339 SH2D6Q7Z4S9 175 aa2.81□□□□□ -1.96
ATXN3-240ENST00000556339 ATP6V0E2Q8NHE4 81 aa2.81□□□□□ -1.96
ATXN3-240ENST00000556339 Q8TAT8 98 aa2.81□□□□□ -1.96
ATXN3-240ENST00000556339 FAM19A4Q96LR4 140 aa2.81□□□□□ -1.96
ATXN3-240ENST00000556339 TP73-AS1Q9UF72 201 aa2.81□□□□□ -1.96
ATXN3-240ENST00000556339 TIMM8BQ9Y5J9 83 aaPredicted RBP2.81□□□□□ -1.96
ATXN3-240ENST00000556339 PCLOQ9Y6V0 5065 aa2.8□□□□□ -1.96
ATXN3-240ENST00000556339 ALMS1Q8TCU4 4167 aa2.8□□□□□ -1.96
ATXN3-240ENST00000556339 RYR1P21817 5038 aa2.8□□□□□ -1.96
ATXN3-240ENST00000556339 TRBV20-1A0A075B6N2 111 aa2.8□□□□□ -1.96
ATXN3-240ENST00000556339 IGHV3OR16-12A0A075B7B8 117 aa2.8□□□□□ -1.96
ATXN3-240ENST00000556339 TRAV2A0A0B4J234 112 aa2.8□□□□□ -1.96
ATXN3-240ENST00000556339 TRBV6-5A0A0K0K1A5 114 aa2.8□□□□□ -1.96
ATXN3-240ENST00000556339 SMKR1H3BMG3 65 aa2.8□□□□□ -1.96
ATXN3-240ENST00000556339 M0QXV9 152 aa2.8□□□□□ -1.96
ATXN3-240ENST00000556339 M0R2N4 97 aa2.8□□□□□ -1.96
ATXN3-240ENST00000556339 SOCS3O14543 225 aa2.8□□□□□ -1.96
ATXN3-240ENST00000556339 VCYO14598 125 aa2.8□□□□□ -1.96
ATXN3-240ENST00000556339 MIFP14174 115 aa2.8□□□□□ -1.96
ATXN3-240ENST00000556339 AZU1P20160 251 aa2.8□□□□□ -1.96
ATXN3-240ENST00000556339 S100A4P26447 101 aaKnown RBP2.8□□□□□ -1.96
ATXN3-240ENST00000556339 HLA-DMBP28068 263 aa2.8□□□□□ -1.96
ATXN3-240ENST00000556339 CRYBA4P53673 196 aa2.8□□□□□ -1.96
ATXN3-240ENST00000556339 EMP1P54849 157 aa2.8□□□□□ -1.96
ATXN3-240ENST00000556339 ERCC8Q13216 396 aa2.8□□□□□ -1.96
ATXN3-240ENST00000556339 C12orf74Q32Q52 190 aa2.8□□□□□ -1.96
ATXN3-240ENST00000556339 Q6ZVH6 145 aa2.8□□□□□ -1.96
ATXN3-240ENST00000556339 PCP2Q8IVA1 136 aa2.8□□□□□ -1.96
ATXN3-240ENST00000556339 UBE2DNLQ8IWF7 75 aa2.8□□□□□ -1.96
ATXN3-240ENST00000556339 MTURNQ8N3F0 131 aa2.8□□□□□ -1.96
ATXN3-240ENST00000556339 ZFAND2AQ8N6M9 145 aa2.8□□□□□ -1.96
ATXN3-240ENST00000556339 SCGB3A1Q96QR1 104 aa2.8□□□□□ -1.96
ATXN3-240ENST00000556339 TIMM17AQ99595 171 aa2.8□□□□□ -1.96
ATXN3-240ENST00000556339 LITAFQ99732 161 aa2.8□□□□□ -1.96
ATXN3-240ENST00000556339 C11orf68Q9H3H3 251 aaKnown RBP2.8□□□□□ -1.96
ATXN3-240ENST00000556339 SPANXB1Q9NS25 103 aaPredicted RBP2.8□□□□□ -1.96
ATXN3-240ENST00000556339 MRPL35Q9NZE8 188 aaKnown RBP2.8□□□□□ -1.96
ATXN3-240ENST00000556339 XCL2Q9UBD3 114 aa2.8□□□□□ -1.96
ATXN3-240ENST00000556339 CHTOPQ9Y3Y2 248 aaKnown RBP2.8□□□□□ -1.96
ATXN3-240ENST00000556339 PHLDA3Q9Y5J5 127 aa2.8□□□□□ -1.96
ATXN3-240ENST00000556339 TRBV7-3A0A075B6L6 115 aa2.79□□□□□ -1.96
ATXN3-240ENST00000556339 DEFB131BA0A096LNP1 70 aa2.79□□□□□ -1.96
ATXN3-240ENST00000556339 C11orf86A6NJI1 115 aa2.79□□□□□ -1.96
ATXN3-240ENST00000556339 KLLNB2CW77 178 aa2.79□□□□□ -1.96
ATXN3-240ENST00000556339 K7EQG2 157 aa2.79□□□□□ -1.96
ATXN3-240ENST00000556339 SPART-AS1P0CW21 52 aa2.79□□□□□ -1.96
ATXN3-240ENST00000556339 RBMY1A1P0DJD3 496 aaKnown RBP2.79□□□□□ -1.96
ATXN3-240ENST00000556339 RBMY1CP0DJD4 496 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 387.2 ms