RNA–Protein interactions for RNA: ENST00000556237.1

HIF1A-208, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 4

Gene HIF1A, Length 595 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-208ENST00000556237 C11orf45Q8TAV5 145 aa4.43□□□□□ -1.7
HIF1A-208ENST00000556237 C12orf57Q99622 126 aa4.43□□□□□ -1.7
HIF1A-208ENST00000556237 TRAV26-1A0A087WT03 109 aa4.42□□□□□ -1.7
HIF1A-208ENST00000556237 C20orf202A1L168 122 aa4.42□□□□□ -1.7
HIF1A-208ENST00000556237 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.42□□□□□ -1.7
HIF1A-208ENST00000556237 SMIM6P0DI80 62 aa4.42□□□□□ -1.7
HIF1A-208ENST00000556237 NANOS2P60321 138 aaKnown RBP4.42□□□□□ -1.7
HIF1A-208ENST00000556237 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.42□□□□□ -1.7
HIF1A-208ENST00000556237 Q6ZN92 141 aa4.42□□□□□ -1.7
HIF1A-208ENST00000556237 NTM-AS1Q6ZSK4 140 aa4.42□□□□□ -1.7
HIF1A-208ENST00000556237 Q8N976 141 aa4.42□□□□□ -1.7
HIF1A-208ENST00000556237 TMEM141Q96I45 108 aa4.42□□□□□ -1.7
HIF1A-208ENST00000556237 VSIG2Q96IQ7 327 aa4.42□□□□□ -1.7
HIF1A-208ENST00000556237 B9D2Q9BPU9 175 aa4.42□□□□□ -1.7
HIF1A-208ENST00000556237 CHCHD7Q9BUK0 85 aa4.42□□□□□ -1.7
HIF1A-208ENST00000556237 CMYA5Q8N3K9 4069 aa4.41□□□□□ -1.7
HIF1A-208ENST00000556237 VWFP04275 2813 aa4.41□□□□□ -1.7
HIF1A-208ENST00000556237 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.41□□□□□ -1.7
HIF1A-208ENST00000556237 A0A096LPF7 62 aa4.41□□□□□ -1.7
HIF1A-208ENST00000556237 IGKV2-29A2NJV5 120 aaPredicted RBP4.41□□□□□ -1.7
HIF1A-208ENST00000556237 IGIPA6NJ69 53 aa4.41□□□□□ -1.7
HIF1A-208ENST00000556237 KRTAP10-7P60409 375 aaPredicted RBP4.41□□□□□ -1.7
HIF1A-208ENST00000556237 S100A12P80511 92 aa4.41□□□□□ -1.7
HIF1A-208ENST00000556237 DEFA6Q01524 100 aa4.41□□□□□ -1.7
HIF1A-208ENST00000556237 MRPL23Q16540 153 aaKnown RBP4.41□□□□□ -1.7
HIF1A-208ENST00000556237 TMEM97Q5BJF2 176 aa4.41□□□□□ -1.7
HIF1A-208ENST00000556237 DGAT2L7PQ6IED9 249 aa4.41□□□□□ -1.7
HIF1A-208ENST00000556237 Q6ZTC4 211 aa4.41□□□□□ -1.7
HIF1A-208ENST00000556237 SPATA12Q7Z6I5 190 aa4.41□□□□□ -1.7
HIF1A-208ENST00000556237 PMCHL2Q9BQD1 86 aa4.41□□□□□ -1.7
HIF1A-208ENST00000556237 GTSF1LQ9H1H1 148 aa4.41□□□□□ -1.7
HIF1A-208ENST00000556237 TRBV25-1A0A075B6N4 114 aa4.4□□□□□ -1.71
HIF1A-208ENST00000556237 DEFB131BA0A096LNP1 70 aa4.4□□□□□ -1.71
HIF1A-208ENST00000556237 LINC00694P0DN24 101 aa4.4□□□□□ -1.71
HIF1A-208ENST00000556237 ZC2HC1BQ5TFG8 222 aa4.4□□□□□ -1.71
HIF1A-208ENST00000556237 LINC01545Q5VT33 79 aa4.4□□□□□ -1.71
HIF1A-208ENST00000556237 LGALS9CQ6DKI2 356 aa4.4□□□□□ -1.71
HIF1A-208ENST00000556237 ATOH7Q8N100 152 aa4.4□□□□□ -1.71
HIF1A-208ENST00000556237 BAALCQ8WXS3 180 aa4.4□□□□□ -1.71
HIF1A-208ENST00000556237 TIMM17AQ99595 171 aa4.4□□□□□ -1.71
HIF1A-208ENST00000556237 OPRPNQ99935 248 aaPredicted RBP4.4□□□□□ -1.71
HIF1A-208ENST00000556237 TMEM243Q9BU79 118 aa4.4□□□□□ -1.71
HIF1A-208ENST00000556237 VCX2Q9H322 139 aa4.4□□□□□ -1.71
HIF1A-208ENST00000556237 ICOSQ9Y6W8 199 aa4.4□□□□□ -1.71
HIF1A-208ENST00000556237 A0A087WX48 190 aa4.39□□□□□ -1.71
HIF1A-208ENST00000556237 TRBV6-8A0A0A6YYG3 113 aa4.39□□□□□ -1.71
HIF1A-208ENST00000556237 TMEM262E9PQX1 116 aa4.39□□□□□ -1.71
HIF1A-208ENST00000556237 PRYO14603 147 aa4.39□□□□□ -1.71
HIF1A-208ENST00000556237 UBE2L6O14933 153 aa4.39□□□□□ -1.71
HIF1A-208ENST00000556237 SMAGPQ0VAQ4 97 aa4.39□□□□□ -1.71
HIF1A-208ENST00000556237 GAGE6Q13070 117 aa4.39□□□□□ -1.71
HIF1A-208ENST00000556237 PMVKQ15126 192 aa4.39□□□□□ -1.71
HIF1A-208ENST00000556237 PAPPA-AS1Q5QFB9 102 aa4.39□□□□□ -1.71
HIF1A-208ENST00000556237 CEMP1Q6PRD7 247 aaPredicted RBP4.39□□□□□ -1.71
HIF1A-208ENST00000556237 SH2D6Q7Z4S9 175 aa4.39□□□□□ -1.71
HIF1A-208ENST00000556237 CHCHD5Q9BSY4 110 aa4.39□□□□□ -1.71
HIF1A-208ENST00000556237 TM2D2Q9BX73 214 aa4.39□□□□□ -1.71
HIF1A-208ENST00000556237 CST9LQ9H4G1 147 aa4.39□□□□□ -1.71
HIF1A-208ENST00000556237 UBE2D4Q9Y2X8 147 aa4.39□□□□□ -1.71
HIF1A-208ENST00000556237 CHTOPQ9Y3Y2 248 aaKnown RBP4.39□□□□□ -1.71
HIF1A-208ENST00000556237 PYGO1Q9Y3Y4 419 aa4.39□□□□□ -1.71
HIF1A-208ENST00000556237 IGLV4-3A0A075B6K6 122 aa4.38□□□□□ -1.71
HIF1A-208ENST00000556237 TRAV9-2A0A087WT02 112 aa4.38□□□□□ -1.71
HIF1A-208ENST00000556237 TRAV10A0A0B4J240 114 aa4.38□□□□□ -1.71
HIF1A-208ENST00000556237 TRAV12-1A0A0B4J245 112 aa4.38□□□□□ -1.71
HIF1A-208ENST00000556237 H3BNG1 76 aa4.38□□□□□ -1.71
HIF1A-208ENST00000556237 H7C423 109 aa4.38□□□□□ -1.71
HIF1A-208ENST00000556237 FGF6P10767 208 aa4.38□□□□□ -1.71
HIF1A-208ENST00000556237 AMMECR1LQ6DCA0 310 aa4.38□□□□□ -1.71
HIF1A-208ENST00000556237 LYPD5Q6UWN5 251 aa4.38□□□□□ -1.71
HIF1A-208ENST00000556237 TEX43Q6ZNM6 134 aa4.38□□□□□ -1.71
HIF1A-208ENST00000556237 TMEM101Q96IK0 257 aa4.38□□□□□ -1.71
HIF1A-208ENST00000556237 VAMP8Q9BV40 100 aa4.38□□□□□ -1.71
HIF1A-208ENST00000556237 TIMM21Q9BVV7 248 aa4.38□□□□□ -1.71
HIF1A-208ENST00000556237 SPANXA1Q9NS26 97 aa4.38□□□□□ -1.71
HIF1A-208ENST00000556237 MRPL35Q9NZE8 188 aaKnown RBP4.38□□□□□ -1.71
HIF1A-208ENST00000556237 hDV102S1A0JD36 115 aa4.37□□□□□ -1.71
HIF1A-208ENST00000556237 HSBP1L1C9JCN9 74 aa4.37□□□□□ -1.71
HIF1A-208ENST00000556237 F8VRH5 84 aa4.37□□□□□ -1.71
HIF1A-208ENST00000556237 DPM2O94777 84 aa4.37□□□□□ -1.71
HIF1A-208ENST00000556237 IGKCP01834 107 aa4.37□□□□□ -1.71
HIF1A-208ENST00000556237 MRPS36P82909 103 aaKnown RBP4.37□□□□□ -1.71
HIF1A-208ENST00000556237 MAJINQ3KP22 176 aa4.37□□□□□ -1.71
HIF1A-208ENST00000556237 RNASE13Q5GAN3 156 aaKnown RBP4.37□□□□□ -1.71
HIF1A-208ENST00000556237 ZNF664Q8N3J9 261 aa4.37□□□□□ -1.71
HIF1A-208ENST00000556237 OR5A1Q8NGJ0 315 aa4.37□□□□□ -1.71
HIF1A-208ENST00000556237 AMELXQ99217 191 aa4.37□□□□□ -1.71
HIF1A-208ENST00000556237 PRO1933Q9H354 126 aa4.37□□□□□ -1.71
HIF1A-208ENST00000556237 PAM16Q9Y3D7 125 aa4.37□□□□□ -1.71
HIF1A-208ENST00000556237 CSDC2Q9Y534 153 aaKnown RBP4.37□□□□□ -1.71
HIF1A-208ENST00000556237 A0A0J9YXV3 536 aa4.36□□□□□ -1.71
HIF1A-208ENST00000556237 PCP4L1A6NKN8 68 aa4.36□□□□□ -1.71
HIF1A-208ENST00000556237 SPATA45Q537H7 98 aa4.36□□□□□ -1.71
HIF1A-208ENST00000556237 LELP1Q5T871 98 aa4.36□□□□□ -1.71
HIF1A-208ENST00000556237 Q6ZUT4 128 aa4.36□□□□□ -1.71
HIF1A-208ENST00000556237 MRPL52Q86TS9 123 aaKnown RBP4.36□□□□□ -1.71
HIF1A-208ENST00000556237 STPG4Q8N801 248 aa4.36□□□□□ -1.71
HIF1A-208ENST00000556237 FAM104AQ969W3 186 aa4.36□□□□□ -1.71
HIF1A-208ENST00000556237 C2orf88Q9BSF0 95 aa4.36□□□□□ -1.71
HIF1A-208ENST00000556237 CDC42SE2Q9NRR3 84 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms