RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 SRSF9Q13242 221 aaKnown RBP eCLIP4.25□□□□□ -1.73
ATXN3-236ENST00000556220 PRR27Q6MZM9 219 aa4.25□□□□□ -1.73
ATXN3-236ENST00000556220 ARL6IP6Q8N6S5 226 aa4.25□□□□□ -1.73
ATXN3-236ENST00000556220 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.25□□□□□ -1.73
ATXN3-236ENST00000556220 NUP35Q8NFH5 326 aa4.25□□□□□ -1.73
ATXN3-236ENST00000556220 FMC1Q96HJ9 113 aa4.25□□□□□ -1.73
ATXN3-236ENST00000556220 URB1-AS1Q96HZ7 61 aa4.25□□□□□ -1.73
ATXN3-236ENST00000556220 KCNS1Q96KK3 526 aa4.25□□□□□ -1.73
ATXN3-236ENST00000556220 IMMP2LQ96T52 175 aa4.25□□□□□ -1.73
ATXN3-236ENST00000556220 IL36BQ9NZH7 164 aa4.25□□□□□ -1.73
ATXN3-236ENST00000556220 CRCT1Q9UGL9 99 aa4.25□□□□□ -1.73
ATXN3-236ENST00000556220 GRIFINA4D1Z8 144 aa4.24□□□□□ -1.73
ATXN3-236ENST00000556220 TMEM262E9PQX1 116 aa4.24□□□□□ -1.73
ATXN3-236ENST00000556220 HLA-DQA1P01909 254 aa4.24□□□□□ -1.73
ATXN3-236ENST00000556220 CRPP02741 224 aa4.24□□□□□ -1.73
ATXN3-236ENST00000556220 RAB5AP20339 215 aa4.24□□□□□ -1.73
ATXN3-236ENST00000556220 PNRC1Q12796 327 aaPredicted RBP4.24□□□□□ -1.73
ATXN3-236ENST00000556220 ZFP2Q6ZN57 461 aa4.24□□□□□ -1.73
ATXN3-236ENST00000556220 TMEM136Q6ZRR5 245 aa4.24□□□□□ -1.73
ATXN3-236ENST00000556220 ZFP82Q8N141 532 aa4.24□□□□□ -1.73
ATXN3-236ENST00000556220 C14orf178Q8N769 122 aaPredicted RBP4.24□□□□□ -1.73
ATXN3-236ENST00000556220 SMCO4Q9NRQ5 59 aa4.24□□□□□ -1.73
ATXN3-236ENST00000556220 TMEM242Q9NWH2 141 aa4.24□□□□□ -1.73
ATXN3-236ENST00000556220 TMSB15BA0A087X1C1 80 aa4.23□□□□□ -1.73
ATXN3-236ENST00000556220 ARMS2P0C7Q2 107 aa4.23□□□□□ -1.73
ATXN3-236ENST00000556220 RNASE3P12724 160 aaKnown RBP4.23□□□□□ -1.73
ATXN3-236ENST00000556220 MIAQ16674 131 aa4.23□□□□□ -1.73
ATXN3-236ENST00000556220 KRTAP26-1Q6PEX3 210 aa4.23□□□□□ -1.73
ATXN3-236ENST00000556220 C15orf54Q8N8G6 183 aa4.23□□□□□ -1.73
ATXN3-236ENST00000556220 GATD1Q8NB37 220 aa4.23□□□□□ -1.73
ATXN3-236ENST00000556220 C9orf85Q96MD7 179 aa4.23□□□□□ -1.73
ATXN3-236ENST00000556220 TCEAL7Q9BRU2 100 aa4.23□□□□□ -1.73
ATXN3-236ENST00000556220 JPT2Q9H910 190 aa4.23□□□□□ -1.73
ATXN3-236ENST00000556220 hDV102S1A0JD36 115 aa4.22□□□□□ -1.73
ATXN3-236ENST00000556220 A8MWV9 139 aa4.22□□□□□ -1.73
ATXN3-236ENST00000556220 B4DEV8 164 aa4.22□□□□□ -1.73
ATXN3-236ENST00000556220 H7C1H1 209 aa4.22□□□□□ -1.73
ATXN3-236ENST00000556220 TRGC2P03986 189 aa4.22□□□□□ -1.73
ATXN3-236ENST00000556220 VPREB1P12018 145 aa4.22□□□□□ -1.73
ATXN3-236ENST00000556220 CTRLP40313 264 aa4.22□□□□□ -1.73
ATXN3-236ENST00000556220 UFSP1Q6NVU6 142 aa4.22□□□□□ -1.73
ATXN3-236ENST00000556220 RPP21Q9H633 154 aaKnown RBP4.22□□□□□ -1.73
ATXN3-236ENST00000556220 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.21□□□□□ -1.74
ATXN3-236ENST00000556220 FAM231BA6NCW3 169 aa4.21□□□□□ -1.74
ATXN3-236ENST00000556220 HIGD1CA8MV81 97 aa4.21□□□□□ -1.74
ATXN3-236ENST00000556220 GATCO43716 136 aaKnown RBP4.21□□□□□ -1.74
ATXN3-236ENST00000556220 HIST1H2BKO60814 126 aa4.21□□□□□ -1.74
ATXN3-236ENST00000556220 ANGP03950 147 aaKnown RBP4.21□□□□□ -1.74
ATXN3-236ENST00000556220 HIST1H2BJP06899 126 aa4.21□□□□□ -1.74
ATXN3-236ENST00000556220 HIST1H2BOP23527 126 aa4.21□□□□□ -1.74
ATXN3-236ENST00000556220 HIST1H2BBP33778 126 aa4.21□□□□□ -1.74
ATXN3-236ENST00000556220 HIST1H2BDP58876 126 aa4.21□□□□□ -1.74
ATXN3-236ENST00000556220 HIST1H2BCP62807 126 aa4.21□□□□□ -1.74
ATXN3-236ENST00000556220 HIST2H2BEQ16778 126 aa4.21□□□□□ -1.74
ATXN3-236ENST00000556220 MAJINQ3KP22 176 aa4.21□□□□□ -1.74
ATXN3-236ENST00000556220 KIAA1644Q3SXP7 199 aa4.21□□□□□ -1.74
ATXN3-236ENST00000556220 MPV17L2Q567V2 206 aa4.21□□□□□ -1.74
ATXN3-236ENST00000556220 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.21□□□□□ -1.74
ATXN3-236ENST00000556220 PIK3CD-AS1Q5SR53 167 aa4.21□□□□□ -1.74
ATXN3-236ENST00000556220 MRPL54Q6P161 138 aaKnown RBP4.21□□□□□ -1.74
ATXN3-236ENST00000556220 OR2D3Q8NGH3 330 aa4.21□□□□□ -1.74
ATXN3-236ENST00000556220 OR10AG1Q8NH19 301 aa4.21□□□□□ -1.74
ATXN3-236ENST00000556220 CMTM2Q8TAZ6 248 aa4.21□□□□□ -1.74
ATXN3-236ENST00000556220 TSKUQ8WUA8 353 aa4.21□□□□□ -1.74
ATXN3-236ENST00000556220 HIST1H2BHQ93079 126 aa4.21□□□□□ -1.74
ATXN3-236ENST00000556220 SMIM12Q96EX1 92 aa4.21□□□□□ -1.74
ATXN3-236ENST00000556220 PGLYRP4Q96LB8 373 aa4.21□□□□□ -1.74
ATXN3-236ENST00000556220 HIST1H2BNQ99877 126 aa4.21□□□□□ -1.74
ATXN3-236ENST00000556220 HIST1H2BMQ99879 126 aa4.21□□□□□ -1.74
ATXN3-236ENST00000556220 CNFNQ9BYD5 112 aa4.21□□□□□ -1.74
ATXN3-236ENST00000556220 ZFP30Q9Y2G7 519 aa4.21□□□□□ -1.74
ATXN3-236ENST00000556220 A0A0A0MQY5 61 aa4.2□□□□□ -1.74
ATXN3-236ENST00000556220 RHODO00212 210 aa4.2□□□□□ -1.74
ATXN3-236ENST00000556220 SNAI2O43623 268 aa4.2□□□□□ -1.74
ATXN3-236ENST00000556220 MT-ND4LP03901 98 aa4.2□□□□□ -1.74
ATXN3-236ENST00000556220 TRGC1P0CF51 173 aa4.2□□□□□ -1.74
ATXN3-236ENST00000556220 UBE2G1P62253 170 aa4.2□□□□□ -1.74
ATXN3-236ENST00000556220 COX6A2Q02221 97 aa4.2□□□□□ -1.74
ATXN3-236ENST00000556220 IQCJQ1A5X6 159 aa4.2□□□□□ -1.74
ATXN3-236ENST00000556220 DNLZQ5SXM8 178 aa4.2□□□□□ -1.74
ATXN3-236ENST00000556220 LYZL1Q6UWQ5 148 aa4.2□□□□□ -1.74
ATXN3-236ENST00000556220 STPG4Q8N801 248 aa4.2□□□□□ -1.74
ATXN3-236ENST00000556220 PRR34Q9NV39 138 aa4.2□□□□□ -1.74
ATXN3-236ENST00000556220 PSORS1C2Q9UIG4 136 aa4.2□□□□□ -1.74
ATXN3-236ENST00000556220 TRBV6-8A0A0A6YYG3 113 aa4.19□□□□□ -1.74
ATXN3-236ENST00000556220 TRAV26-2A0A0B4J265 109 aa4.19□□□□□ -1.74
ATXN3-236ENST00000556220 SERTM2A0A1B0GWG4 89 aa4.19□□□□□ -1.74
ATXN3-236ENST00000556220 SMKR1H3BMG3 65 aa4.19□□□□□ -1.74
ATXN3-236ENST00000556220 S100A9P06702 114 aaKnown RBP4.19□□□□□ -1.74
ATXN3-236ENST00000556220 RPS10P46783 165 aaKnown RBP4.19□□□□□ -1.74
ATXN3-236ENST00000556220 UBE2D3P61077 147 aa4.19□□□□□ -1.74
ATXN3-236ENST00000556220 UBE2D2P62837 147 aa4.19□□□□□ -1.74
ATXN3-236ENST00000556220 PRR4Q16378 134 aa4.19□□□□□ -1.74
ATXN3-236ENST00000556220 SMUG1Q53HV7 270 aa4.19□□□□□ -1.74
ATXN3-236ENST00000556220 FAM162BQ5T6X4 162 aa4.19□□□□□ -1.74
ATXN3-236ENST00000556220 Q6ZRP5 223 aa4.19□□□□□ -1.74
ATXN3-236ENST00000556220 ZNF664Q8N3J9 261 aa4.19□□□□□ -1.74
ATXN3-236ENST00000556220 TRBV7-3A0A075B6L6 115 aa4.18□□□□□ -1.74
ATXN3-236ENST00000556220 A0A096LNJ9 63 aa4.18□□□□□ -1.74
ATXN3-236ENST00000556220 IGKV2-24A0A0C4DH68 120 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 706.5 ms