RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 LINC01546A6NGU7 62 aa5.15□□□□□ -1.59
TDP1-214ENST00000556063 PSCAO43653 123 aa5.15□□□□□ -1.59
TDP1-214ENST00000556063 REG3AQ06141 175 aa5.15□□□□□ -1.59
TDP1-214ENST00000556063 PAPPA-AS1Q5QFB9 102 aa5.15□□□□□ -1.59
TDP1-214ENST00000556063 C2orf66Q6UXQ4 117 aa5.15□□□□□ -1.59
TDP1-214ENST00000556063 LINC00269Q8N2A0 174 aa5.15□□□□□ -1.59
TDP1-214ENST00000556063 Q8N3U1 123 aa5.15□□□□□ -1.59
TDP1-214ENST00000556063 CHCHD1Q96BP2 118 aaKnown RBP5.15□□□□□ -1.59
TDP1-214ENST00000556063 C1orf43Q9BWL3 253 aa5.15□□□□□ -1.59
TDP1-214ENST00000556063 KRTAP1-5Q9BYS1 174 aa5.15□□□□□ -1.59
TDP1-214ENST00000556063 Q9HAA7 133 aa5.15□□□□□ -1.59
TDP1-214ENST00000556063 UBE2D4Q9Y2X8 147 aa5.15□□□□□ -1.59
TDP1-214ENST00000556063 PYGO1Q9Y3Y4 419 aa5.15□□□□□ -1.59
TDP1-214ENST00000556063 C1orf196B1AJZ1 125 aa5.14□□□□□ -1.59
TDP1-214ENST00000556063 CCL25O15444 150 aa5.14□□□□□ -1.59
TDP1-214ENST00000556063 HSBP1O75506 76 aa5.14□□□□□ -1.59
TDP1-214ENST00000556063 NPSP0C0P6 89 aa5.14□□□□□ -1.59
TDP1-214ENST00000556063 RPL39P62891 51 aaKnown RBP5.14□□□□□ -1.59
TDP1-214ENST00000556063 MRPS36P82909 103 aaKnown RBP5.14□□□□□ -1.59
TDP1-214ENST00000556063 Q6ZN92 141 aa5.14□□□□□ -1.59
TDP1-214ENST00000556063 LINC00336Q6ZUF6 198 aa5.14□□□□□ -1.59
TDP1-214ENST00000556063 ZNF664Q8N3J9 261 aa5.14□□□□□ -1.59
TDP1-214ENST00000556063 CDC42SE2Q9NRR3 84 aa5.14□□□□□ -1.59
TDP1-214ENST00000556063 PRR34Q9NV39 138 aa5.14□□□□□ -1.59
TDP1-214ENST00000556063 IGKV2D-24A0A075B6R9 120 aa5.13□□□□□ -1.59
TDP1-214ENST00000556063 IGKV3OR2-268A0A0C4DH90 116 aa5.13□□□□□ -1.59
TDP1-214ENST00000556063 EREGO14944 169 aa5.13□□□□□ -1.59
TDP1-214ENST00000556063 HBDP02042 147 aa5.13□□□□□ -1.59
TDP1-214ENST00000556063 SS18Q15532 418 aa5.13□□□□□ -1.59
TDP1-214ENST00000556063 CLPSL2Q6UWE3 100 aa5.13□□□□□ -1.59
TDP1-214ENST00000556063 ENHOQ6UWT2 76 aa5.13□□□□□ -1.59
TDP1-214ENST00000556063 TOMM6Q96B49 74 aa5.13□□□□□ -1.59
TDP1-214ENST00000556063 TMEM141Q96I45 108 aa5.13□□□□□ -1.59
TDP1-214ENST00000556063 SCGB3A1Q96QR1 104 aa5.13□□□□□ -1.59
TDP1-214ENST00000556063 ATP5LO75964 103 aa5.12□□□□□ -1.59
TDP1-214ENST00000556063 TEX43Q6ZNM6 134 aa5.12□□□□□ -1.59
TDP1-214ENST00000556063 ERASQ7Z444 233 aa5.12□□□□□ -1.59
TDP1-214ENST00000556063 TIMM17AQ99595 171 aa5.12□□□□□ -1.59
TDP1-214ENST00000556063 C2orf88Q9BSF0 95 aa5.12□□□□□ -1.59
TDP1-214ENST00000556063 VCX2Q9H322 139 aa5.12□□□□□ -1.59
TDP1-214ENST00000556063 STARD9Q9P2P6 4700 aa5.11□□□□□ -1.59
TDP1-214ENST00000556063 IGIPA6NJ69 53 aa5.11□□□□□ -1.59
TDP1-214ENST00000556063 IFITM10A6NMD0 228 aa5.11□□□□□ -1.59
TDP1-214ENST00000556063 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.11□□□□□ -1.59
TDP1-214ENST00000556063 HIST1H2BKO60814 126 aa5.11□□□□□ -1.59
TDP1-214ENST00000556063 HIST1H2BJP06899 126 aa5.11□□□□□ -1.59
TDP1-214ENST00000556063 HIST1H2BOP23527 126 aa5.11□□□□□ -1.59
TDP1-214ENST00000556063 HIST1H2BBP33778 126 aa5.11□□□□□ -1.59
TDP1-214ENST00000556063 HIST1H2BDP58876 126 aa5.11□□□□□ -1.59
TDP1-214ENST00000556063 HIST1H2BCP62807 126 aa5.11□□□□□ -1.59
TDP1-214ENST00000556063 HIST2H2BEQ16778 126 aa5.11□□□□□ -1.59
TDP1-214ENST00000556063 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.11□□□□□ -1.59
TDP1-214ENST00000556063 Q6ZUT4 128 aa5.11□□□□□ -1.59
TDP1-214ENST00000556063 HIST1H2BHQ93079 126 aa5.11□□□□□ -1.59
TDP1-214ENST00000556063 HIST1H2BNQ99877 126 aa5.11□□□□□ -1.59
TDP1-214ENST00000556063 HIST1H2BMQ99879 126 aa5.11□□□□□ -1.59
TDP1-214ENST00000556063 IGLV10-54A0A075B6I4 117 aa5.1□□□□□ -1.59
TDP1-214ENST00000556063 IGLV4-3A0A075B6K6 122 aa5.1□□□□□ -1.59
TDP1-214ENST00000556063 TRAV13-1A0A0B4J241 112 aa5.1□□□□□ -1.59
TDP1-214ENST00000556063 LINC00959A0A1B0GUT2 108 aa5.1□□□□□ -1.59
TDP1-214ENST00000556063 PRSS29PA6NIE9 313 aa5.1□□□□□ -1.59
TDP1-214ENST00000556063 RTL8CO15255 209 aa5.1□□□□□ -1.59
TDP1-214ENST00000556063 SERF1AO75920 110 aa5.1□□□□□ -1.59
TDP1-214ENST00000556063 SEC11AP67812 179 aa5.1□□□□□ -1.59
TDP1-214ENST00000556063 RNASE13Q5GAN3 156 aaKnown RBP5.1□□□□□ -1.59
TDP1-214ENST00000556063 Q6ZRN7 208 aaPredicted RBP5.1□□□□□ -1.59
TDP1-214ENST00000556063 CHCHD10Q8WYQ3 142 aaPredicted RBP5.1□□□□□ -1.59
TDP1-214ENST00000556063 URB1-AS1Q96HZ7 61 aa5.1□□□□□ -1.59
TDP1-214ENST00000556063 KRTAP4-12Q9BQ66 201 aa5.1□□□□□ -1.59
TDP1-214ENST00000556063 PMCHL1Q16048 86 aa5.09□□□□□ -1.59
TDP1-214ENST00000556063 C14orf177Q52M58 125 aa5.09□□□□□ -1.59
TDP1-214ENST00000556063 CFAP161Q6P656 301 aa5.09□□□□□ -1.59
TDP1-214ENST00000556063 OPRPNQ99935 248 aaPredicted RBP5.09□□□□□ -1.59
TDP1-214ENST00000556063 A0A096LNJ9 63 aa5.08□□□□□ -1.6
TDP1-214ENST00000556063 GAGE12HA6NDE8 117 aa5.08□□□□□ -1.6
TDP1-214ENST00000556063 LEPROTL1O95214 131 aa5.08□□□□□ -1.6
TDP1-214ENST00000556063 XCL1P47992 114 aa5.08□□□□□ -1.6
TDP1-214ENST00000556063 NDUFA6P56556 154 aa5.08□□□□□ -1.6
TDP1-214ENST00000556063 TNP2Q05952 138 aa5.08□□□□□ -1.6
TDP1-214ENST00000556063 PMVKQ15126 192 aa5.08□□□□□ -1.6
TDP1-214ENST00000556063 PDZD11Q5EBL8 140 aa5.08□□□□□ -1.6
TDP1-214ENST00000556063 CD164L2Q6UWJ8 174 aa5.08□□□□□ -1.6
TDP1-214ENST00000556063 FAM19A2Q8N3H0 131 aa5.08□□□□□ -1.6
TDP1-214ENST00000556063 AMELXQ99217 191 aa5.08□□□□□ -1.6
TDP1-214ENST00000556063 HSPB8Q9UJY1 196 aa5.08□□□□□ -1.6
TDP1-214ENST00000556063 DYNC2H1Q8NCM8 4307 aaKnown RBP5.08□□□□□ -1.6
TDP1-214ENST00000556063 ALMS1Q8TCU4 4167 aa5.08□□□□□ -1.6
TDP1-214ENST00000556063 A0A087WTM6 91 aa5.07□□□□□ -1.6
TDP1-214ENST00000556063 COX7A2LO14548 114 aa5.07□□□□□ -1.6
TDP1-214ENST00000556063 APOMO95445 188 aa5.07□□□□□ -1.6
TDP1-214ENST00000556063 S100A6P06703 90 aa5.07□□□□□ -1.6
TDP1-214ENST00000556063 PRSS1P07477 247 aa5.07□□□□□ -1.6
TDP1-214ENST00000556063 MALP21145 153 aa5.07□□□□□ -1.6
TDP1-214ENST00000556063 COA6Q5JTJ3 125 aaKnown RBP5.07□□□□□ -1.6
TDP1-214ENST00000556063 BAALCQ8WXS3 180 aa5.07□□□□□ -1.6
TDP1-214ENST00000556063 FAM104AQ969W3 186 aa5.07□□□□□ -1.6
TDP1-214ENST00000556063 IFI27L1Q96BM0 104 aa5.07□□□□□ -1.6
TDP1-214ENST00000556063 CST9LQ9H4G1 147 aa5.07□□□□□ -1.6
TDP1-214ENST00000556063 GEMIN7Q9H840 131 aaKnown RBP5.07□□□□□ -1.6
TDP1-214ENST00000556063 USP17L23D6RBM5 183 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms