RNA–Protein interactions for RNA: ENST00000555616.5

ACTN1-215, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 919 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-215ENST00000555616 TRBV6-8A0A0A6YYG3 113 aa6.57□□□□□ -1.36
ACTN1-215ENST00000555616 LINC01549A6NIU2 74 aa6.57□□□□□ -1.36
ACTN1-215ENST00000555616 KRTDAPP60985 99 aa6.57□□□□□ -1.36
ACTN1-215ENST00000555616 TNP2Q05952 138 aa6.57□□□□□ -1.36
ACTN1-215ENST00000555616 SMAGPQ0VAQ4 97 aa6.57□□□□□ -1.36
ACTN1-215ENST00000555616 PMCHL1Q16048 86 aa6.57□□□□□ -1.36
ACTN1-215ENST00000555616 TMEM243Q9BU79 118 aa6.57□□□□□ -1.36
ACTN1-215ENST00000555616 UBE2L6O14933 153 aa6.56□□□□□ -1.36
ACTN1-215ENST00000555616 SIVA1O15304 175 aa6.56□□□□□ -1.36
ACTN1-215ENST00000555616 SCGB1D1O95968 90 aa6.56□□□□□ -1.36
ACTN1-215ENST00000555616 LYPD5Q6UWN5 251 aa6.56□□□□□ -1.36
ACTN1-215ENST00000555616 DEFB104AQ8WTQ1 72 aa6.56□□□□□ -1.36
ACTN1-215ENST00000555616 CYSLTR1Q9Y271 337 aa6.56□□□□□ -1.36
ACTN1-215ENST00000555616 DYNC1H1Q14204 4646 aaKnown RBP6.55□□□□□ -1.36
ACTN1-215ENST00000555616 A0A096LNJ9 63 aa6.55□□□□□ -1.36
ACTN1-215ENST00000555616 H7C423 109 aa6.55□□□□□ -1.36
ACTN1-215ENST00000555616 C3orf79P0CE67 100 aa6.55□□□□□ -1.36
ACTN1-215ENST00000555616 PKIAP61925 76 aa6.55□□□□□ -1.36
ACTN1-215ENST00000555616 LELP1Q5T871 98 aa6.55□□□□□ -1.36
ACTN1-215ENST00000555616 NTM-AS1Q6ZSK4 140 aa6.55□□□□□ -1.36
ACTN1-215ENST00000555616 C20orf203Q8NBC4 194 aa6.55□□□□□ -1.36
ACTN1-215ENST00000555616 CHCHD5Q9BSY4 110 aa6.55□□□□□ -1.36
ACTN1-215ENST00000555616 MAP1LC3CQ9BXW4 147 aa6.55□□□□□ -1.36
ACTN1-215ENST00000555616 TRAV8-6A0A0B4J262 113 aa6.54□□□□□ -1.36
ACTN1-215ENST00000555616 C20orf202A1L168 122 aa6.54□□□□□ -1.36
ACTN1-215ENST00000555616 C2orf66Q6UXQ4 117 aa6.54□□□□□ -1.36
ACTN1-215ENST00000555616 Q6ZRN7 208 aaPredicted RBP6.54□□□□□ -1.36
ACTN1-215ENST00000555616 CHCHD7Q9BUK0 85 aa6.54□□□□□ -1.36
ACTN1-215ENST00000555616 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.53□□□□□ -1.36
ACTN1-215ENST00000555616 IGKV2-29A2NJV5 120 aaPredicted RBP6.53□□□□□ -1.36
ACTN1-215ENST00000555616 SYS1-DBNDD2H3BUS1 97 aa6.53□□□□□ -1.36
ACTN1-215ENST00000555616 K7EP13 123 aa6.53□□□□□ -1.36
ACTN1-215ENST00000555616 DNAH10OSP0CZ25 163 aa6.53□□□□□ -1.36
ACTN1-215ENST00000555616 S100A12P80511 92 aa6.53□□□□□ -1.36
ACTN1-215ENST00000555616 AMMECR1LQ6DCA0 310 aa6.53□□□□□ -1.36
ACTN1-215ENST00000555616 PET117Q6UWS5 81 aa6.53□□□□□ -1.36
ACTN1-215ENST00000555616 SPATA12Q7Z6I5 190 aa6.53□□□□□ -1.36
ACTN1-215ENST00000555616 WFDC10BQ8IUB3 73 aa6.53□□□□□ -1.36
ACTN1-215ENST00000555616 TOMM6Q96B49 74 aa6.53□□□□□ -1.36
ACTN1-215ENST00000555616 SPANXA1Q9NS26 97 aa6.53□□□□□ -1.36
ACTN1-215ENST00000555616 PCLOQ9Y6V0 5065 aa6.53□□□□□ -1.36
ACTN1-215ENST00000555616 TMEM262E9PQX1 116 aa6.52□□□□□ -1.37
ACTN1-215ENST00000555616 ATP5LO75964 103 aa6.52□□□□□ -1.37
ACTN1-215ENST00000555616 ZNF25P17030 456 aaPredicted RBP6.52□□□□□ -1.37
ACTN1-215ENST00000555616 RPL39P62891 51 aaKnown RBP6.52□□□□□ -1.37
ACTN1-215ENST00000555616 GAGE6Q13070 117 aa6.52□□□□□ -1.37
ACTN1-215ENST00000555616 DGAT2L7PQ6IED9 249 aa6.52□□□□□ -1.37
ACTN1-215ENST00000555616 LINC00173Q6ZV60 143 aa6.52□□□□□ -1.37
ACTN1-215ENST00000555616 Q8N976 141 aa6.52□□□□□ -1.37
ACTN1-215ENST00000555616 IFI27L1Q96BM0 104 aa6.52□□□□□ -1.37
ACTN1-215ENST00000555616 TMEM101Q96IK0 257 aa6.52□□□□□ -1.37
ACTN1-215ENST00000555616 SCGB3A1Q96QR1 104 aa6.52□□□□□ -1.37
ACTN1-215ENST00000555616 TIMM21Q9BVV7 248 aa6.52□□□□□ -1.37
ACTN1-215ENST00000555616 A0A087WX48 190 aa6.51□□□□□ -1.37
ACTN1-215ENST00000555616 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.51□□□□□ -1.37
ACTN1-215ENST00000555616 FGF6P10767 208 aa6.51□□□□□ -1.37
ACTN1-215ENST00000555616 PAPPA-AS1Q5QFB9 102 aa6.51□□□□□ -1.37
ACTN1-215ENST00000555616 CDPF1Q6NVV7 123 aa6.51□□□□□ -1.37
ACTN1-215ENST00000555616 TEX43Q6ZNM6 134 aa6.51□□□□□ -1.37
ACTN1-215ENST00000555616 ERASQ7Z444 233 aa6.51□□□□□ -1.37
ACTN1-215ENST00000555616 MRPL52Q86TS9 123 aaKnown RBP6.51□□□□□ -1.37
ACTN1-215ENST00000555616 OR5A1Q8NGJ0 315 aa6.51□□□□□ -1.37
ACTN1-215ENST00000555616 TMEM141Q96I45 108 aa6.51□□□□□ -1.37
ACTN1-215ENST00000555616 PYGO1Q9Y3Y4 419 aa6.51□□□□□ -1.37
ACTN1-215ENST00000555616 TRAV9-2A0A087WT02 112 aa6.5□□□□□ -1.37
ACTN1-215ENST00000555616 NPSP0C0P6 89 aa6.5□□□□□ -1.37
ACTN1-215ENST00000555616 LINC01545Q5VT33 79 aa6.5□□□□□ -1.37
ACTN1-215ENST00000555616 Q6ZN92 141 aa6.5□□□□□ -1.37
ACTN1-215ENST00000555616 TIMM17AQ99595 171 aa6.5□□□□□ -1.37
ACTN1-215ENST00000555616 UBE2D4Q9Y2X8 147 aa6.5□□□□□ -1.37
ACTN1-215ENST00000555616 CSDC2Q9Y534 153 aaKnown RBP6.5□□□□□ -1.37
ACTN1-215ENST00000555616 RYR1P21817 5038 aa6.49□□□□□ -1.37
ACTN1-215ENST00000555616 A0A1B0GUV1 79 aa6.49□□□□□ -1.37
ACTN1-215ENST00000555616 IGIPA6NJ69 53 aa6.49□□□□□ -1.37
ACTN1-215ENST00000555616 C16orf90A8MZG2 172 aa6.49□□□□□ -1.37
ACTN1-215ENST00000555616 MRPS36P82909 103 aaKnown RBP6.49□□□□□ -1.37
ACTN1-215ENST00000555616 LINC01556Q5JQF7 62 aa6.49□□□□□ -1.37
ACTN1-215ENST00000555616 NFE4Q86UQ8 179 aa6.49□□□□□ -1.37
ACTN1-215ENST00000555616 C10orf126Q8N4M7 172 aa6.49□□□□□ -1.37
ACTN1-215ENST00000555616 RBX1P62877 108 aa6.48□□□□□ -1.37
ACTN1-215ENST00000555616 MPV17L2Q567V2 206 aa6.48□□□□□ -1.37
ACTN1-215ENST00000555616 VAMP8Q9BV40 100 aa6.48□□□□□ -1.37
ACTN1-215ENST00000555616 IGLV4-3A0A075B6K6 122 aa6.47□□□□□ -1.37
ACTN1-215ENST00000555616 TRAV12-1A0A0B4J245 112 aa6.47□□□□□ -1.37
ACTN1-215ENST00000555616 H0Y8G0 127 aa6.47□□□□□ -1.37
ACTN1-215ENST00000555616 CDK2AP2O75956 126 aa6.47□□□□□ -1.37
ACTN1-215ENST00000555616 PRSS1P07477 247 aa6.47□□□□□ -1.37
ACTN1-215ENST00000555616 KRTAP10-2P60368 255 aa6.47□□□□□ -1.37
ACTN1-215ENST00000555616 Q6ZUT4 128 aa6.47□□□□□ -1.37
ACTN1-215ENST00000555616 ZNF664Q8N3J9 261 aa6.47□□□□□ -1.37
ACTN1-215ENST00000555616 C2orf88Q9BSF0 95 aa6.47□□□□□ -1.37
ACTN1-215ENST00000555616 VCX2Q9H322 139 aa6.47□□□□□ -1.37
ACTN1-215ENST00000555616 TSTD3H0UI37 97 aa6.46□□□□□ -1.38
ACTN1-215ENST00000555616 IGHV3-30P01768 117 aa6.46□□□□□ -1.38
ACTN1-215ENST00000555616 IGHV3-33P01772 117 aa6.46□□□□□ -1.38
ACTN1-215ENST00000555616 ANGP03950 147 aaKnown RBP6.46□□□□□ -1.38
ACTN1-215ENST00000555616 IGHV3-30-3P0DP02 117 aa6.46□□□□□ -1.38
ACTN1-215ENST00000555616 IGHV3-30-5P0DP03 117 aa6.46□□□□□ -1.38
ACTN1-215ENST00000555616 PMVKQ15126 192 aa6.46□□□□□ -1.38
ACTN1-215ENST00000555616 BAALCQ8WXS3 180 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms