RNA–Protein interactions for RNA: ENST00000555548.1

PAX3-210, Transcript of paired box 3, human

TSL 4

Gene PAX3, Length 458 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PAX3-210	ENST00000555548	RNASE2	P10153	161 aa	Known RBP	4.09	□□□□□ -1.75
PAX3-210	ENST00000555548	PDE6H	Q13956	83 aa		4.09	□□□□□ -1.75
PAX3-210	ENST00000555548	RRN3P1	Q2M238	152 aa		4.09	□□□□□ -1.75
PAX3-210	ENST00000555548	ZFAND6	Q6FIF0	208 aa		4.09	□□□□□ -1.75
PAX3-210	ENST00000555548	B9D2	Q9BPU9	175 aa		4.09	□□□□□ -1.75
PAX3-210	ENST00000555548	NDUFA4L2	Q9NRX3	87 aa		4.09	□□□□□ -1.75
PAX3-210	ENST00000555548	KLK12	Q9UKR0	248 aa		4.09	□□□□□ -1.75
PAX3-210	ENST00000555548		S4R3C0	116 aa		4.09	□□□□□ -1.75
PAX3-210	ENST00000555548	NCKAP5	O14513	1909 aa		4.09	□□□□□ -1.76
PAX3-210	ENST00000555548	TANC2	Q9HCD6	1990 aa		4.09	□□□□□ -1.76
PAX3-210	ENST00000555548	TRBV25-1	A0A075B6N4	114 aa		4.08	□□□□□ -1.76
PAX3-210	ENST00000555548	IGHV3-15	A0A0B4J1V0	119 aa		4.08	□□□□□ -1.76
PAX3-210	ENST00000555548	APOM	O95445	188 aa		4.08	□□□□□ -1.76
PAX3-210	ENST00000555548	SLC25A5	P05141	298 aa	Known RBP	4.08	□□□□□ -1.76
PAX3-210	ENST00000555548	ORM2	P19652	201 aa		4.08	□□□□□ -1.76
PAX3-210	ENST00000555548	PLN	P26678	52 aa		4.08	□□□□□ -1.76
PAX3-210	ENST00000555548	FCER1G	P30273	86 aa		4.08	□□□□□ -1.76
PAX3-210	ENST00000555548	PLGLA	Q15195	96 aa		4.08	□□□□□ -1.76
PAX3-210	ENST00000555548	C12orf74	Q32Q52	190 aa		4.08	□□□□□ -1.76
PAX3-210	ENST00000555548	CFAP126	Q5VTH2	177 aa		4.08	□□□□□ -1.76
PAX3-210	ENST00000555548	DAZ4	Q86SG3	579 aa	Known RBP	4.08	□□□□□ -1.76
PAX3-210	ENST00000555548	TEN1	Q86WV5	123 aa		4.08	□□□□□ -1.76
PAX3-210	ENST00000555548	TEX29	Q8N6K0	151 aa		4.08	□□□□□ -1.76
PAX3-210	ENST00000555548	TMEM167A	Q8TBQ9	72 aa		4.08	□□□□□ -1.76
PAX3-210	ENST00000555548	TMEM126A	Q9H061	195 aa		4.08	□□□□□ -1.76
PAX3-210	ENST00000555548	DAZ1	Q9NQZ3	744 aa	Known RBP	4.08	□□□□□ -1.76
PAX3-210	ENST00000555548	FAM215A	Q9Y5M1	114 aa		4.08	□□□□□ -1.76
PAX3-210	ENST00000555548	ZAN	Q9Y493	2812 aa		4.08	□□□□□ -1.76
PAX3-210	ENST00000555548	IGHV3OR15-7	A0A075B7D8	119 aa		4.07	□□□□□ -1.76
PAX3-210	ENST00000555548	TRAV12-1	A0A0B4J245	112 aa		4.07	□□□□□ -1.76
PAX3-210	ENST00000555548	DPM2	O94777	84 aa		4.07	□□□□□ -1.76
PAX3-210	ENST00000555548	IGKC	P01834	107 aa		4.07	□□□□□ -1.76
PAX3-210	ENST00000555548	WFDC2	Q14508	124 aa		4.07	□□□□□ -1.76
PAX3-210	ENST00000555548	ETDB	Q3ZM63	59 aa		4.07	□□□□□ -1.76
PAX3-210	ENST00000555548		Q6ZUT4	128 aa		4.07	□□□□□ -1.76
PAX3-210	ENST00000555548	OR11H6	Q8NGC7	330 aa		4.07	□□□□□ -1.76
PAX3-210	ENST00000555548	PRELID3A	Q96N28	172 aa		4.07	□□□□□ -1.76
PAX3-210	ENST00000555548	TP73-AS1	Q9UF72	201 aa		4.07	□□□□□ -1.76
PAX3-210	ENST00000555548	HRNR	Q86YZ3	2850 aa	Predicted RBP	4.06	□□□□□ -1.76
PAX3-210	ENST00000555548	UBE2D3	P61077	147 aa		4.06	□□□□□ -1.76
PAX3-210	ENST00000555548	UBE2D2	P62837	147 aa		4.06	□□□□□ -1.76
PAX3-210	ENST00000555548	KRTAP1-1	Q07627	177 aa		4.06	□□□□□ -1.76
PAX3-210	ENST00000555548	LCE3C	Q5T5A8	94 aa		4.06	□□□□□ -1.76
PAX3-210	ENST00000555548	PATE2	Q6UY27	113 aa		4.06	□□□□□ -1.76
PAX3-210	ENST00000555548	LINC00305	Q7Z4B0	112 aa		4.06	□□□□□ -1.76
PAX3-210	ENST00000555548		Q86TA4	180 aa		4.06	□□□□□ -1.76
PAX3-210	ENST00000555548	SON	P18583	2426 aa	Known RBP	4.06	□□□□□ -1.76
PAX3-210	ENST00000555548	MXRA5	Q9NR99	2828 aa		4.05	□□□□□ -1.76
PAX3-210	ENST00000555548	IGKV1D-37	A0A075B6S9	117 aa		4.05	□□□□□ -1.76
PAX3-210	ENST00000555548	TRAV8-1	A0A0A6YYK1	113 aa		4.05	□□□□□ -1.76
PAX3-210	ENST00000555548	TRAV3	A0A0B4J244	114 aa		4.05	□□□□□ -1.76
PAX3-210	ENST00000555548	MYMX	A0A1B0GTQ4	84 aa		4.05	□□□□□ -1.76
PAX3-210	ENST00000555548	SLC25A16	P16260	332 aa		4.05	□□□□□ -1.76
PAX3-210	ENST00000555548	IFI27	P40305	119 aa	Predicted RBP	4.05	□□□□□ -1.76
PAX3-210	ENST00000555548	ZNF137P	P52743	207 aa		4.05	□□□□□ -1.76
PAX3-210	ENST00000555548	FXYD2	P54710	66 aa		4.05	□□□□□ -1.76
PAX3-210	ENST00000555548	SPINK9	Q5DT21	86 aa		4.05	□□□□□ -1.76
PAX3-210	ENST00000555548	LINC00322	Q6ZN03	302 aa	Predicted RBP	4.05	□□□□□ -1.76
PAX3-210	ENST00000555548	ZNF833P	Q6ZTB9	187 aa		4.05	□□□□□ -1.76
PAX3-210	ENST00000555548	LINC00311	Q8N616	119 aa		4.05	□□□□□ -1.76
PAX3-210	ENST00000555548	KLF14	Q8TD94	323 aa	Predicted RBP	4.05	□□□□□ -1.76
PAX3-210	ENST00000555548	MYOZ3	Q8TDC0	251 aa		4.05	□□□□□ -1.76
PAX3-210	ENST00000555548	RNASE6	Q93091	150 aa	Known RBP	4.05	□□□□□ -1.76
PAX3-210	ENST00000555548	RAB37	Q96AX2	223 aa		4.05	□□□□□ -1.76
PAX3-210	ENST00000555548	IMUP	Q9GZP8	106 aa		4.05	□□□□□ -1.76
PAX3-210	ENST00000555548	TRBV7-3	A0A075B6L6	115 aa		4.04	□□□□□ -1.76
PAX3-210	ENST00000555548		A0A087WX48	190 aa		4.04	□□□□□ -1.76
PAX3-210	ENST00000555548	NCR2	O95944	276 aa		4.04	□□□□□ -1.76
PAX3-210	ENST00000555548	PPP1R17	O96001	155 aa		4.04	□□□□□ -1.76
PAX3-210	ENST00000555548	SAA2	P0DJI9	122 aa	Predicted RBP	4.04	□□□□□ -1.76
PAX3-210	ENST00000555548	CKS2	P33552	79 aa		4.04	□□□□□ -1.76
PAX3-210	ENST00000555548	UBE2D1	P51668	147 aa		4.04	□□□□□ -1.76
PAX3-210	ENST00000555548	LINC00313	P59037	77 aa		4.04	□□□□□ -1.76
PAX3-210	ENST00000555548	HERVK_113	P63121	156 aa		4.04	□□□□□ -1.76
PAX3-210	ENST00000555548		Q8N8P6	123 aa		4.04	□□□□□ -1.76
PAX3-210	ENST00000555548	CCL19	Q99731	98 aa		4.04	□□□□□ -1.76
PAX3-210	ENST00000555548	TTTY12	Q9BZ98	90 aa		4.04	□□□□□ -1.76
PAX3-210	ENST00000555548	NHP2	Q9NX24	153 aa	Known RBP	4.04	□□□□□ -1.76
PAX3-210	ENST00000555548	HIGD1A	Q9Y241	93 aa		4.04	□□□□□ -1.76
PAX3-210	ENST00000555548	HILPDA	Q9Y5L2	63 aa		4.04	□□□□□ -1.76
PAX3-210	ENST00000555548	ANK2	Q01484	3957 aa		4.04	□□□□□ -1.76
PAX3-210	ENST00000555548	TRBV19	A0A075B6N1	114 aa		4.03	□□□□□ -1.76
PAX3-210	ENST00000555548	TRAV5	A0A0B4J249	113 aa		4.03	□□□□□ -1.76
PAX3-210	ENST00000555548	FABP5P3	A8MUU1	101 aa		4.03	□□□□□ -1.76
PAX3-210	ENST00000555548		A8MWP4	228 aa		4.03	□□□□□ -1.76
PAX3-210	ENST00000555548		A8MWV9	139 aa		4.03	□□□□□ -1.76
PAX3-210	ENST00000555548	C16orf90	A8MZG2	172 aa		4.03	□□□□□ -1.76
PAX3-210	ENST00000555548		D6R8Y8	96 aa		4.03	□□□□□ -1.76
PAX3-210	ENST00000555548	NPY	P01303	97 aa		4.03	□□□□□ -1.76
PAX3-210	ENST00000555548	ARMS2	P0C7Q2	107 aa		4.03	□□□□□ -1.76
PAX3-210	ENST00000555548	PYY	P10082	97 aa		4.03	□□□□□ -1.76
PAX3-210	ENST00000555548	IFITM1	P13164	125 aa		4.03	□□□□□ -1.76
PAX3-210	ENST00000555548	RPS28	P62857	69 aa	Known RBP	4.03	□□□□□ -1.76
PAX3-210	ENST00000555548	VMA21	Q3ZAQ7	101 aa		4.03	□□□□□ -1.76
PAX3-210	ENST00000555548	MRPL51	Q4U2R6	128 aa	Known RBP	4.03	□□□□□ -1.76
PAX3-210	ENST00000555548	RPL39P5	Q59GN2	51 aa		4.03	□□□□□ -1.76
PAX3-210	ENST00000555548	KRTAP11-1	Q8IUC1	163 aa		4.03	□□□□□ -1.76
PAX3-210	ENST00000555548	C1orf158	Q8N1D5	194 aa		4.03	□□□□□ -1.76
PAX3-210	ENST00000555548	TMEM86B	Q8N661	226 aa		4.03	□□□□□ -1.76
PAX3-210	ENST00000555548	RPUSD1	Q9UJJ7	312 aa	Known RBP	4.03	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms